EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000037601 (Gene tree)
Gene ID: 18102
Gene Symbol: Nme1
Alias: NDPK-A|NM23-M1|non-metastatic cells 1|protein (NM23A) expressed in
Full Name: NME/NM23 nucleoside diphosphate kinase 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 11543
Position: chr11: 93956979-93968521
Accession: 97355
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000135884	-	3181	-	ENSMUSP00000117022	152 (aa)	-	P15532
ENSMUST00000107844	-	452	-	ENSMUSP00000103475	117 (aa)	-	Q5NC79
ENSMUST00000021220	-	493	-	ENSMUSP00000021220	127 (aa)	-	Q5NC80

Gene Model

Click here to download ENSMUSG00000037601's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00230	Purine metabolism	KEGG
mmu00240	Pyrimidine metabolism	KEGG
mmu00983	Drug metabolism - other enzymes	KEGG
mmu01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000037601's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000037601	Nme1	100	96.063	ENSG00000239672	NME1	100	94.079	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000287	magnesium ion binding	-	ISO	Function
GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding	-	ISO	Function
GO:0002762	negative regulation of myeloid leukocyte differentiation	-	ISO	Process
GO:0003697	single-stranded DNA binding	-	ISO	Function
GO:0004536	deoxyribonuclease activity	-	ISO	Function
GO:0004550	nucleoside diphosphate kinase activity	21873635.	IBA	Function
GO:0004550	nucleoside diphosphate kinase activity	-	ISO	Function
GO:0005524	ATP binding	-	ISO	Function
GO:0005525	GTP binding	-	ISO	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005741	mitochondrial outer membrane	-	ISO	Component
GO:0005813	centrosome	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005882	intermediate filament	-	ISO	Component
GO:0006165	nucleoside diphosphate phosphorylation	-	ISO	Process
GO:0006183	GTP biosynthetic process	-	IEA	Process
GO:0006228	UTP biosynthetic process	-	IEA	Process
GO:0006241	CTP biosynthetic process	-	IEA	Process
GO:0006897	endocytosis	-	IEA	Process
GO:0007399	nervous system development	-	IEA	Process
GO:0007595	lactation	12848338.	IMP	Process
GO:0009117	nucleotide metabolic process	-	IEA	Process
GO:0010629	negative regulation of gene expression	-	ISO	Process
GO:0010976	positive regulation of neuron projection development	-	ISO	Process
GO:0016020	membrane	-	ISO	Component
GO:0016301	kinase activity	-	IEA	Function
GO:0016310	phosphorylation	-	IEA	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0019215	intermediate filament binding	-	ISO	Function
GO:0019899	enzyme binding	-	ISO	Function
GO:0019901	protein kinase binding	-	ISO	Function
GO:0030154	cell differentiation	-	IEA	Process
GO:0030879	mammary gland development	12848338.	IMP	Process
GO:0032587	ruffle membrane	-	ISO	Component
GO:0042802	identical protein binding	-	ISO	Function
GO:0043015	gamma-tubulin binding	-	ISO	Function
GO:0043024	ribosomal small subunit binding	-	ISO	Function
GO:0043209	myelin sheath	17634366.	HDA	Component
GO:0043388	positive regulation of DNA binding	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0048471	perinuclear region of cytoplasm	-	ISO	Component
GO:0050679	positive regulation of epithelial cell proliferation	-	ISO	Process