EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000037772 (Gene tree)
Gene ID: 19935
Gene Symbol: Mrpl23
Alias: L23mrp|Rpl23l
Full Name: mitochondrial ribosomal protein L23
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 8062 bases
Position: chr7:142532686-142540747
Accession: 1196612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000039784	Ribosomal_L23	PF00276.20	9.7e-14	1	1
ENSMUSP00000148138	Ribosomal_L23	PF00276.20	1.9e-13	1	1
ENSMUSP00000147311	Ribosomal_L23	PF00276.20	3.8e-11	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000145002	-	712	-	-	- (aa)	-	-
ENSMUST00000137345	-	644	-	-	- (aa)	-	-
ENSMUST00000209576	-	3715	-	-	- (aa)	-	-
ENSMUST00000038675	-	692	XM_006508518	ENSMUSP00000039784	146 (aa)	XP_006508581	O35972
ENSMUST00000141098	-	693	-	-	- (aa)	-	-
ENSMUST00000210803	-	590	-	ENSMUSP00000147311	101 (aa)	-	A0A1B0GQZ1
ENSMUST00000210662	-	736	XM_006508516	ENSMUSP00000148138	172 (aa)	XP_006508579	A0A1B0GSZ9

Gene Model

Click here to download ENSMUSG00000037772's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000037772's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000037772	Mrpl23	100	83.766	ENSG00000214026	MRPL23	100	83.766	Homo_sapiens
ENSMUSG00000037772	Mrpl23	97	63.087	ENSAPOG00000013198	mrpl23	97	63.087	Acanthochromis_polyacanthus
ENSMUSG00000037772	Mrpl23	100	76.774	ENSAMEG00000002153	-	100	76.774	Ailuropoda_melanoleuca
ENSMUSG00000037772	Mrpl23	100	63.399	ENSACIG00000024327	mrpl23	100	63.399	Amphilophus_citrinellus
ENSMUSG00000037772	Mrpl23	97	63.087	ENSAOCG00000013679	mrpl23	97	63.087	Amphiprion_ocellaris
ENSMUSG00000037772	Mrpl23	97	63.087	ENSAPEG00000010298	mrpl23	97	63.087	Amphiprion_percula
ENSMUSG00000037772	Mrpl23	99	62.500	ENSATEG00000019314	mrpl23	99	62.500	Anabas_testudineus
ENSMUSG00000037772	Mrpl23	98	59.259	ENSAPLG00000012955	-	92	59.259	Anas_platyrhynchos
ENSMUSG00000037772	Mrpl23	64	77.660	ENSACAG00000009700	-	99	77.660	Anolis_carolinensis
ENSMUSG00000037772	Mrpl23	96	81.081	ENSANAG00000010507	-	97	81.081	Aotus_nancymaae
ENSMUSG00000037772	Mrpl23	97	62.416	ENSACLG00000002565	mrpl23	97	62.416	Astatotilapia_calliptera
ENSMUSG00000037772	Mrpl23	84	57.812	ENSAMXG00000016759	mrpl23	97	48.571	Astyanax_mexicanus
ENSMUSG00000037772	Mrpl23	98	72.642	ENSBTAG00000000103	MRPL23	100	72.642	Bos_taurus
ENSMUSG00000037772	Mrpl23	83	38.462	WBGene00020348	mrpl-23	77	38.462	Caenorhabditis_elegans
ENSMUSG00000037772	Mrpl23	100	77.778	ENSCAFG00000010086	-	100	77.778	Canis_familiaris
ENSMUSG00000037772	Mrpl23	100	77.778	ENSCAFG00020017439	-	100	77.778	Canis_lupus_dingo
ENSMUSG00000037772	Mrpl23	100	81.507	ENSCHIG00000019224	-	100	81.507	Capra_hircus
ENSMUSG00000037772	Mrpl23	99	81.333	ENSTSYG00000030664	-	99	81.333	Carlito_syrichta
ENSMUSG00000037772	Mrpl23	96	63.636	ENSCAPG00000012400	-	100	63.636	Cavia_aperea
ENSMUSG00000037772	Mrpl23	100	78.523	ENSCPOG00000035162	-	100	78.523	Cavia_porcellus
ENSMUSG00000037772	Mrpl23	100	80.795	ENSCCAG00000021662	-	100	80.795	Cebus_capucinus
ENSMUSG00000037772	Mrpl23	96	81.757	ENSCATG00000037780	-	95	81.757	Cercocebus_atys
ENSMUSG00000037772	Mrpl23	100	81.188	ENSCATG00000019817	-	95	79.452	Cercocebus_atys
ENSMUSG00000037772	Mrpl23	100	80.000	ENSCLAG00000015446	-	100	80.000	Chinchilla_lanigera
ENSMUSG00000037772	Mrpl23	100	83.766	ENSCSAG00000009837	-	100	83.766	Chlorocebus_sabaeus
ENSMUSG00000037772	Mrpl23	96	81.208	ENSCSAG00000019043	-	96	81.208	Chlorocebus_sabaeus
ENSMUSG00000037772	Mrpl23	97	65.333	ENSCPBG00000007389	-	97	65.333	Chrysemys_picta_bellii
ENSMUSG00000037772	Mrpl23	72	32.432	ENSCING00000002791	-	63	32.143	Ciona_intestinalis
ENSMUSG00000037772	Mrpl23	96	83.108	ENSCANG00000032318	-	100	83.108	Colobus_angolensis_palliatus
ENSMUSG00000037772	Mrpl23	100	93.836	ENSCGRG00001000462	Mrpl23	100	93.836	Cricetulus_griseus_chok1gshd
ENSMUSG00000037772	Mrpl23	100	93.836	ENSCGRG00000002207	Mrpl23	100	93.836	Cricetulus_griseus_crigri
ENSMUSG00000037772	Mrpl23	100	58.333	ENSCSEG00000008738	mrpl23	100	60.811	Cynoglossus_semilaevis
ENSMUSG00000037772	Mrpl23	97	61.745	ENSCVAG00000002822	mrpl23	97	61.745	Cyprinodon_variegatus
ENSMUSG00000037772	Mrpl23	100	60.784	ENSDARG00000045696	mrpl23	100	60.784	Danio_rerio
ENSMUSG00000037772	Mrpl23	99	62.338	ENSDNOG00000047306	-	99	64.474	Dasypus_novemcinctus
ENSMUSG00000037772	Mrpl23	100	82.432	ENSDORG00000027504	Mrpl23	100	83.212	Dipodomys_ordii
ENSMUSG00000037772	Mrpl23	100	40.566	FBgn0035335	mRpL23	97	43.448	Drosophila_melanogaster
ENSMUSG00000037772	Mrpl23	96	77.027	ENSEASG00005000456	-	56	75.325	Equus_asinus_asinus
ENSMUSG00000037772	Mrpl23	100	78.571	ENSECAG00000024486	-	53	78.571	Equus_caballus
ENSMUSG00000037772	Mrpl23	100	59.477	ENSELUG00000022256	RM23	100	59.477	Esox_lucius
ENSMUSG00000037772	Mrpl23	100	78.065	ENSFCAG00000018795	-	100	78.065	Felis_catus
ENSMUSG00000037772	Mrpl23	100	60.185	ENSFALG00000011598	-	95	63.946	Ficedula_albicollis
ENSMUSG00000037772	Mrpl23	100	82.667	ENSFDAG00000013606	-	100	82.667	Fukomys_damarensis
ENSMUSG00000037772	Mrpl23	97	62.416	ENSFHEG00000010978	mrpl23	96	61.184	Fundulus_heteroclitus
ENSMUSG00000037772	Mrpl23	95	57.931	ENSGMOG00000004509	mrpl23	100	57.931	Gadus_morhua
ENSMUSG00000037772	Mrpl23	100	61.842	ENSGALG00000006561	-	84	56.111	Gallus_gallus
ENSMUSG00000037772	Mrpl23	97	62.416	ENSGAFG00000021827	mrpl23	97	62.416	Gambusia_affinis
ENSMUSG00000037772	Mrpl23	97	61.745	ENSGACG00000011130	mrpl23	97	61.745	Gasterosteus_aculeatus
ENSMUSG00000037772	Mrpl23	97	64.667	ENSGAGG00000023827	-	97	64.667	Gopherus_agassizii
ENSMUSG00000037772	Mrpl23	96	84.459	ENSGGOG00000000333	-	83	84.459	Gorilla_gorilla
ENSMUSG00000037772	Mrpl23	97	62.162	ENSHBUG00000023397	mrpl23	97	61.745	Haplochromis_burtoni
ENSMUSG00000037772	Mrpl23	100	84.247	ENSHGLG00000016722	-	100	84.247	Heterocephalus_glaber_female
ENSMUSG00000037772	Mrpl23	100	84.247	ENSHGLG00100003075	-	100	84.247	Heterocephalus_glaber_male
ENSMUSG00000037772	Mrpl23	97	61.745	ENSHCOG00000009092	mrpl23	97	61.745	Hippocampus_comes
ENSMUSG00000037772	Mrpl23	100	60.784	ENSIPUG00000005383	mrpl23	100	60.784	Ictalurus_punctatus
ENSMUSG00000037772	Mrpl23	100	82.237	ENSSTOG00000024573	-	100	82.237	Ictidomys_tridecemlineatus
ENSMUSG00000037772	Mrpl23	100	85.714	ENSJJAG00000003519	Mrpl23	100	85.714	Jaculus_jaculus
ENSMUSG00000037772	Mrpl23	99	58.553	ENSKMAG00000001599	mrpl23	99	58.553	Kryptolebias_marmoratus
ENSMUSG00000037772	Mrpl23	97	61.745	ENSLBEG00000002580	mrpl23	97	61.745	Labrus_bergylta
ENSMUSG00000037772	Mrpl23	100	61.538	ENSLACG00000011528	mrpl23	100	61.538	Latimeria_chalumnae
ENSMUSG00000037772	Mrpl23	100	63.399	ENSLOCG00000001825	mrpl23	100	63.399	Lepisosteus_oculatus
ENSMUSG00000037772	Mrpl23	100	82.581	ENSMFAG00000034529	-	100	82.581	Macaca_fascicularis
ENSMUSG00000037772	Mrpl23	100	81.188	ENSMFAG00000039715	-	100	81.188	Macaca_fascicularis
ENSMUSG00000037772	Mrpl23	100	81.290	ENSMMUG00000031268	MRPL23	100	81.290	Macaca_mulatta
ENSMUSG00000037772	Mrpl23	100	82.468	ENSMNEG00000036690	-	100	82.468	Macaca_nemestrina
ENSMUSG00000037772	Mrpl23	100	81.188	ENSMNEG00000033446	-	100	81.188	Macaca_nemestrina
ENSMUSG00000037772	Mrpl23	96	82.432	ENSMLEG00000015767	-	100	82.432	Mandrillus_leucophaeus
ENSMUSG00000037772	Mrpl23	97	63.087	ENSMAMG00000003609	mrpl23	97	63.087	Mastacembelus_armatus
ENSMUSG00000037772	Mrpl23	97	62.838	ENSMZEG00005017456	mrpl23	97	62.416	Maylandia_zebra
ENSMUSG00000037772	Mrpl23	99	64.238	ENSMGAG00000007978	-	100	64.238	Meleagris_gallopavo
ENSMUSG00000037772	Mrpl23	100	92.079	ENSMAUG00000018693	Mrpl23	100	94.286	Mesocricetus_auratus
ENSMUSG00000037772	Mrpl23	96	83.688	ENSMICG00000042091	-	99	79.487	Microcebus_murinus
ENSMUSG00000037772	Mrpl23	100	94.521	ENSMOCG00000018436	Mrpl23	100	94.521	Microtus_ochrogaster
ENSMUSG00000037772	Mrpl23	97	61.074	ENSMMOG00000018097	mrpl23	98	60.526	Mola_mola
ENSMUSG00000037772	Mrpl23	100	72.436	ENSMODG00000003437	-	100	72.436	Monodelphis_domestica
ENSMUSG00000037772	Mrpl23	97	63.087	ENSMALG00000014571	mrpl23	100	62.838	Monopterus_albus
ENSMUSG00000037772	Mrpl23	100	98.630	MGP_CAROLIEiJ_G0030727	Mrpl23	100	98.630	Mus_caroli
ENSMUSG00000037772	Mrpl23	100	95.890	MGP_PahariEiJ_G0013923	Mrpl23	100	95.890	Mus_pahari
ENSMUSG00000037772	Mrpl23	100	98.630	MGP_SPRETEiJ_G0031836	Mrpl23	100	98.630	Mus_spretus
ENSMUSG00000037772	Mrpl23	96	77.483	ENSMPUG00000005658	-	97	77.632	Mustela_putorius_furo
ENSMUSG00000037772	Mrpl23	100	71.338	ENSMPUG00000002923	-	99	71.338	Mustela_putorius_furo
ENSMUSG00000037772	Mrpl23	100	84.459	ENSNGAG00000023444	-	100	84.459	Nannospalax_galili
ENSMUSG00000037772	Mrpl23	95	79.137	ENSNGAG00000012877	-	95	79.137	Nannospalax_galili
ENSMUSG00000037772	Mrpl23	97	62.416	ENSNBRG00000007183	mrpl23	97	62.416	Neolamprologus_brichardi
ENSMUSG00000037772	Mrpl23	100	83.766	ENSNLEG00000026950	-	100	83.766	Nomascus_leucogenys
ENSMUSG00000037772	Mrpl23	64	87.097	ENSOPRG00000018353	-	68	87.097	Ochotona_princeps
ENSMUSG00000037772	Mrpl23	99	80.000	ENSODEG00000017262	-	99	80.000	Octodon_degus
ENSMUSG00000037772	Mrpl23	99	71.233	ENSODEG00000012131	-	99	71.233	Octodon_degus
ENSMUSG00000037772	Mrpl23	100	60.131	ENSONIG00000014500	mrpl23	96	62.500	Oreochromis_niloticus
ENSMUSG00000037772	Mrpl23	100	60.185	ENSORLG00000025383	mrpl23	99	60.927	Oryzias_latipes
ENSMUSG00000037772	Mrpl23	99	61.589	ENSORLG00020008379	mrpl23	98	61.589	Oryzias_latipes_hni
ENSMUSG00000037772	Mrpl23	100	59.259	ENSOMEG00000019132	mrpl23	77	61.074	Oryzias_melastigma
ENSMUSG00000037772	Mrpl23	100	81.699	ENSOGAG00000029988	-	100	81.699	Otolemur_garnettii
ENSMUSG00000037772	Mrpl23	89	78.102	ENSOARG00000000706	-	89	75.524	Ovis_aries
ENSMUSG00000037772	Mrpl23	100	84.416	ENSPPAG00000034414	-	100	84.416	Pan_paniscus
ENSMUSG00000037772	Mrpl23	97	76.159	ENSPPRG00000013232	-	97	77.181	Panthera_pardus
ENSMUSG00000037772	Mrpl23	100	84.416	ENSPTRG00000033746	MRPL23	100	84.416	Pan_troglodytes
ENSMUSG00000037772	Mrpl23	100	81.818	ENSPANG00000018813	-	100	81.818	Papio_anubis
ENSMUSG00000037772	Mrpl23	100	61.438	ENSPKIG00000001102	mrpl23	100	61.438	Paramormyrops_kingsleyae
ENSMUSG00000037772	Mrpl23	100	58.333	ENSPSIG00000012834	-	100	61.719	Pelodiscus_sinensis
ENSMUSG00000037772	Mrpl23	98	60.377	ENSPMGG00000006407	mrpl23	100	57.516	Periophthalmus_magnuspinnatus
ENSMUSG00000037772	Mrpl23	100	90.411	ENSPEMG00000018572	Mrpl23	100	92.466	Peromyscus_maniculatus_bairdii
ENSMUSG00000037772	Mrpl23	100	61.039	ENSPMAG00000005259	mrpl23	100	61.039	Petromyzon_marinus
ENSMUSG00000037772	Mrpl23	96	66.429	ENSPCIG00000027047	-	88	66.429	Phascolarctos_cinereus
ENSMUSG00000037772	Mrpl23	97	62.416	ENSPFOG00000014159	mrpl23	97	62.416	Poecilia_formosa
ENSMUSG00000037772	Mrpl23	99	62.914	ENSPLAG00000023456	mrpl23	99	62.914	Poecilia_latipinna
ENSMUSG00000037772	Mrpl23	97	62.416	ENSPMEG00000012252	mrpl23	97	62.416	Poecilia_mexicana
ENSMUSG00000037772	Mrpl23	97	61.745	ENSPREG00000019951	mrpl23	96	61.745	Poecilia_reticulata
ENSMUSG00000037772	Mrpl23	100	85.714	ENSPPYG00000002918	-	100	85.714	Pongo_abelii
ENSMUSG00000037772	Mrpl23	96	79.730	ENSPCOG00000026555	-	100	79.730	Propithecus_coquereli
ENSMUSG00000037772	Mrpl23	81	74.194	ENSPVAG00000000331	-	84	72.656	Pteropus_vampyrus
ENSMUSG00000037772	Mrpl23	97	62.416	ENSPNYG00000015541	mrpl23	97	62.416	Pundamilia_nyererei
ENSMUSG00000037772	Mrpl23	100	58.824	ENSPNAG00000010548	mrpl23	100	58.824	Pygocentrus_nattereri
ENSMUSG00000037772	Mrpl23	100	97.260	ENSRNOG00000020354	Mrpl23	100	97.260	Rattus_norvegicus
ENSMUSG00000037772	Mrpl23	100	82.468	ENSRBIG00000041638	-	100	82.468	Rhinopithecus_bieti
ENSMUSG00000037772	Mrpl23	100	80.128	ENSRROG00000004661	-	100	82.432	Rhinopithecus_roxellana
ENSMUSG00000037772	Mrpl23	96	80.690	ENSSBOG00000025338	-	82	80.822	Saimiri_boliviensis_boliviensis
ENSMUSG00000037772	Mrpl23	96	74.830	ENSSHAG00000002716	-	100	74.830	Sarcophilus_harrisii
ENSMUSG00000037772	Mrpl23	100	62.092	ENSSFOG00015002519	mrpl23	100	62.092	Scleropages_formosus
ENSMUSG00000037772	Mrpl23	100	60.000	ENSSMAG00000009264	mrpl23	100	60.000	Scophthalmus_maximus
ENSMUSG00000037772	Mrpl23	97	62.500	ENSSDUG00000019634	mrpl23	100	62.252	Seriola_dumerili
ENSMUSG00000037772	Mrpl23	97	62.500	ENSSLDG00000012055	mrpl23	97	62.500	Seriola_lalandi_dorsalis
ENSMUSG00000037772	Mrpl23	100	64.706	ENSSPUG00000002656	-	100	64.706	Sphenodon_punctatus
ENSMUSG00000037772	Mrpl23	96	63.946	ENSSPAG00000001601	mrpl23	100	63.514	Stegastes_partitus
ENSMUSG00000037772	Mrpl23	100	78.947	ENSSSCG00000038364	-	100	78.947	Sus_scrofa
ENSMUSG00000037772	Mrpl23	100	59.259	ENSTGUG00000009338	MRPL23	100	62.585	Taeniopygia_guttata
ENSMUSG00000037772	Mrpl23	97	60.403	ENSTRUG00000009637	mrpl23	97	60.403	Takifugu_rubripes
ENSMUSG00000037772	Mrpl23	64	65.591	ENSTNIG00000010463	mrpl23	100	65.591	Tetraodon_nigroviridis
ENSMUSG00000037772	Mrpl23	77	79.310	ENSTTRG00000009281	-	69	79.310	Tursiops_truncatus
ENSMUSG00000037772	Mrpl23	100	76.774	ENSUAMG00000020867	-	96	78.523	Ursus_americanus
ENSMUSG00000037772	Mrpl23	100	76.774	ENSUMAG00000006227	-	85	76.774	Ursus_maritimus
ENSMUSG00000037772	Mrpl23	100	75.163	ENSVVUG00000002581	-	78	75.163	Vulpes_vulpes
ENSMUSG00000037772	Mrpl23	100	62.987	ENSXETG00000014017	mrpl23	100	65.359	Xenopus_tropicalis
ENSMUSG00000037772	Mrpl23	96	53.378	ENSXCOG00000020628	mrpl23	98	52.667	Xiphophorus_couchianus
ENSMUSG00000037772	Mrpl23	97	61.745	ENSXMAG00000015496	mrpl23	97	61.745	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001650	fibrillar center	-	ISO	Component
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	-	ISO	Function
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005761	mitochondrial ribosome	-	IDA	Component
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISO	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	-	ISO	Process
GO:0032543	mitochondrial translation	21873635.	IBA	Process