EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000037845 (Gene tree)
Gene ID: 382137
Gene Symbol: Fdxacb1
Alias: D630004A14Rik
Full Name: ferredoxin-fold anticodon binding domain containing 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 5113 bases
Position: chr9:50768236-50773348
Accession: 3584513
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000135658	FDX-ACB	PF03147.14	4e-17	1	1
ENSMUSP00000037082	FDX-ACB	PF03147.14	7.6e-17	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000177384	-	518	-	ENSMUSP00000135579	117 (aa)	-	H3BKY5
ENSMUST00000176335	-	1817	-	ENSMUSP00000135658	420 (aa)	-	Q3UY23
ENSMUST00000042391	-	2658	-	ENSMUSP00000037082	622 (aa)	-	Q3UY23
ENSMUST00000176619	-	2527	-	-	- (aa)	-	-
ENSMUST00000176145	-	864	-	ENSMUSP00000135796	115 (aa)	-	H3BLI0

Gene Model

Click here to download ENSMUSG00000037845's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000037845's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000037845	Fdxacb1	100	71.635	ENSG00000255561	FDXACB1	100	71.635	Homo_sapiens
ENSMUSG00000037845	Fdxacb1	99	35.575	ENSAPOG00000009726	fdxacb1	99	35.575	Acanthochromis_polyacanthus
ENSMUSG00000037845	Fdxacb1	99	35.575	ENSAPOG00000009041	FDXACB1	99	35.575	Acanthochromis_polyacanthus
ENSMUSG00000037845	Fdxacb1	99	34.729	ENSACIG00000004208	fdxacb1	99	35.039	Amphilophus_citrinellus
ENSMUSG00000037845	Fdxacb1	99	34.483	ENSAOCG00000007455	fdxacb1	99	34.483	Amphiprion_ocellaris
ENSMUSG00000037845	Fdxacb1	99	34.633	ENSAPEG00000023857	fdxacb1	99	34.633	Amphiprion_percula
ENSMUSG00000037845	Fdxacb1	99	34.866	ENSATEG00000020757	fdxacb1	99	34.866	Anabas_testudineus
ENSMUSG00000037845	Fdxacb1	99	46.795	ENSAPLG00000004681	FDXACB1	99	46.795	Anas_platyrhynchos
ENSMUSG00000037845	Fdxacb1	100	71.955	ENSANAG00000022744	FDXACB1	100	71.955	Aotus_nancymaae
ENSMUSG00000037845	Fdxacb1	99	34.074	ENSACLG00000020497	fdxacb1	99	34.074	Astatotilapia_calliptera
ENSMUSG00000037845	Fdxacb1	99	34.074	ENSACLG00000027415	-	99	34.074	Astatotilapia_calliptera
ENSMUSG00000037845	Fdxacb1	97	39.836	ENSAMXG00000038372	fdxacb1	99	39.583	Astyanax_mexicanus
ENSMUSG00000037845	Fdxacb1	100	70.833	ENSBTAG00000004949	FDXACB1	100	70.833	Bos_taurus
ENSMUSG00000037845	Fdxacb1	100	71.474	ENSCJAG00000040413	FDXACB1	100	71.474	Callithrix_jacchus
ENSMUSG00000037845	Fdxacb1	100	71.429	ENSCAFG00020006314	FDXACB1	100	71.429	Canis_lupus_dingo
ENSMUSG00000037845	Fdxacb1	100	71.314	ENSCHIG00000017261	FDXACB1	100	71.314	Capra_hircus
ENSMUSG00000037845	Fdxacb1	100	72.276	ENSTSYG00000029218	FDXACB1	100	72.276	Carlito_syrichta
ENSMUSG00000037845	Fdxacb1	100	59.953	ENSCAPG00000010478	-	100	89.286	Cavia_aperea
ENSMUSG00000037845	Fdxacb1	100	70.192	ENSCPOG00000032584	FDXACB1	100	70.192	Cavia_porcellus
ENSMUSG00000037845	Fdxacb1	100	71.154	ENSCCAG00000024232	FDXACB1	100	71.154	Cebus_capucinus
ENSMUSG00000037845	Fdxacb1	100	72.115	ENSCATG00000035600	FDXACB1	100	72.115	Cercocebus_atys
ENSMUSG00000037845	Fdxacb1	100	71.268	ENSCLAG00000015613	FDXACB1	100	71.268	Chinchilla_lanigera
ENSMUSG00000037845	Fdxacb1	100	71.955	ENSCSAG00000002878	FDXACB1	100	71.955	Chlorocebus_sabaeus
ENSMUSG00000037845	Fdxacb1	99	68.690	ENSCHOG00000003037	FDXACB1	99	68.690	Choloepus_hoffmanni
ENSMUSG00000037845	Fdxacb1	99	50.711	ENSCPBG00000009087	FDXACB1	99	50.711	Chrysemys_picta_bellii
ENSMUSG00000037845	Fdxacb1	100	71.955	ENSCANG00000043844	FDXACB1	100	71.955	Colobus_angolensis_palliatus
ENSMUSG00000037845	Fdxacb1	100	78.457	ENSCGRG00001023825	Fdxacb1	98	78.457	Cricetulus_griseus_chok1gshd
ENSMUSG00000037845	Fdxacb1	100	78.457	ENSCGRG00000001752	Fdxacb1	98	78.457	Cricetulus_griseus_crigri
ENSMUSG00000037845	Fdxacb1	99	35.988	ENSCSEG00000006964	fdxacb1	99	35.988	Cynoglossus_semilaevis
ENSMUSG00000037845	Fdxacb1	99	35.143	ENSCVAG00000013005	fdxacb1	99	35.143	Cyprinodon_variegatus
ENSMUSG00000037845	Fdxacb1	99	40.545	ENSDARG00000095750	fdxacb1	99	40.545	Danio_rerio
ENSMUSG00000037845	Fdxacb1	100	69.649	ENSDNOG00000037748	FDXACB1	100	69.649	Dasypus_novemcinctus
ENSMUSG00000037845	Fdxacb1	100	69.760	ENSDORG00000028060	Fdxacb1	100	69.760	Dipodomys_ordii
ENSMUSG00000037845	Fdxacb1	100	68.000	ENSETEG00000004898	FDXACB1	99	68.000	Echinops_telfairi
ENSMUSG00000037845	Fdxacb1	100	72.756	ENSEASG00005007198	FDXACB1	100	72.756	Equus_asinus_asinus
ENSMUSG00000037845	Fdxacb1	100	72.756	ENSECAG00000009561	FDXACB1	100	72.756	Equus_caballus
ENSMUSG00000037845	Fdxacb1	93	65.394	ENSEEUG00000009839	FDXACB1	83	68.807	Erinaceus_europaeus
ENSMUSG00000037845	Fdxacb1	99	32.887	ENSELUG00000011250	fdxacb1	99	33.185	Esox_lucius
ENSMUSG00000037845	Fdxacb1	100	70.994	ENSFCAG00000024559	FDXACB1	100	70.994	Felis_catus
ENSMUSG00000037845	Fdxacb1	99	47.059	ENSFALG00000006177	FDXACB1	99	47.059	Ficedula_albicollis
ENSMUSG00000037845	Fdxacb1	100	71.268	ENSFDAG00000016115	FDXACB1	100	71.429	Fukomys_damarensis
ENSMUSG00000037845	Fdxacb1	99	35.152	ENSFHEG00000016602	fdxacb1	99	35.152	Fundulus_heteroclitus
ENSMUSG00000037845	Fdxacb1	100	45.925	ENSGALG00000007967	FDXACB1	100	45.925	Gallus_gallus
ENSMUSG00000037845	Fdxacb1	99	35.135	ENSGAFG00000001162	fdxacb1	95	35.135	Gambusia_affinis
ENSMUSG00000037845	Fdxacb1	99	35.591	ENSGACG00000020639	fdxacb1	99	35.591	Gasterosteus_aculeatus
ENSMUSG00000037845	Fdxacb1	99	50.553	ENSGAGG00000020645	FDXACB1	98	51.468	Gopherus_agassizii
ENSMUSG00000037845	Fdxacb1	100	71.955	ENSGGOG00000037643	FDXACB1	100	71.955	Gorilla_gorilla
ENSMUSG00000037845	Fdxacb1	99	34.384	ENSHBUG00000003489	fdxacb1	99	34.384	Haplochromis_burtoni
ENSMUSG00000037845	Fdxacb1	100	71.750	ENSHGLG00000004171	FDXACB1	100	71.750	Heterocephalus_glaber_female
ENSMUSG00000037845	Fdxacb1	100	71.750	ENSHGLG00100017458	FDXACB1	100	71.750	Heterocephalus_glaber_male
ENSMUSG00000037845	Fdxacb1	99	36.094	ENSHCOG00000018986	fdxacb1	99	36.094	Hippocampus_comes
ENSMUSG00000037845	Fdxacb1	99	38.057	ENSIPUG00000022559	FDXACB1	99	38.170	Ictalurus_punctatus
ENSMUSG00000037845	Fdxacb1	100	71.429	ENSJJAG00000010367	Fdxacb1	100	71.429	Jaculus_jaculus
ENSMUSG00000037845	Fdxacb1	99	36.160	ENSKMAG00000022235	fdxacb1	99	36.160	Kryptolebias_marmoratus
ENSMUSG00000037845	Fdxacb1	99	34.030	ENSLBEG00000016100	fdxacb1	99	34.030	Labrus_bergylta
ENSMUSG00000037845	Fdxacb1	88	53.333	ENSLACG00000018780	FDXACB1	99	53.333	Latimeria_chalumnae
ENSMUSG00000037845	Fdxacb1	100	71.565	ENSLAFG00000014650	FDXACB1	100	71.565	Loxodonta_africana
ENSMUSG00000037845	Fdxacb1	100	71.635	ENSMFAG00000002448	FDXACB1	100	71.635	Macaca_fascicularis
ENSMUSG00000037845	Fdxacb1	100	71.795	ENSMNEG00000041539	FDXACB1	100	71.795	Macaca_nemestrina
ENSMUSG00000037845	Fdxacb1	99	34.904	ENSMAMG00000018674	fdxacb1	98	34.904	Mastacembelus_armatus
ENSMUSG00000037845	Fdxacb1	99	34.074	ENSMZEG00005018799	fdxacb1	99	34.074	Maylandia_zebra
ENSMUSG00000037845	Fdxacb1	100	79.100	ENSMAUG00000019310	Fdxacb1	100	79.100	Mesocricetus_auratus
ENSMUSG00000037845	Fdxacb1	100	72.756	ENSMICG00000045510	FDXACB1	100	72.756	Microcebus_murinus
ENSMUSG00000037845	Fdxacb1	100	78.939	ENSMOCG00000011835	Fdxacb1	100	78.939	Microtus_ochrogaster
ENSMUSG00000037845	Fdxacb1	99	37.342	ENSMMOG00000018749	fdxacb1	99	37.342	Mola_mola
ENSMUSG00000037845	Fdxacb1	66	52.679	ENSMALG00000007153	fdxacb1	85	52.679	Monopterus_albus
ENSMUSG00000037845	Fdxacb1	100	96.785	MGP_CAROLIEiJ_G0032197	Fdxacb1	100	96.785	Mus_caroli
ENSMUSG00000037845	Fdxacb1	100	95.016	MGP_PahariEiJ_G0015065	Fdxacb1	100	95.016	Mus_pahari
ENSMUSG00000037845	Fdxacb1	100	98.392	MGP_SPRETEiJ_G0033336	Fdxacb1	100	98.392	Mus_spretus
ENSMUSG00000037845	Fdxacb1	100	73.077	ENSMPUG00000003585	FDXACB1	100	73.077	Mustela_putorius_furo
ENSMUSG00000037845	Fdxacb1	100	72.320	ENSMLUG00000014872	FDXACB1	100	72.320	Myotis_lucifugus
ENSMUSG00000037845	Fdxacb1	100	73.194	ENSNGAG00000014606	Fdxacb1	100	73.194	Nannospalax_galili
ENSMUSG00000037845	Fdxacb1	99	35.474	ENSNBRG00000006939	fdxacb1	99	35.474	Neolamprologus_brichardi
ENSMUSG00000037845	Fdxacb1	100	72.436	ENSNLEG00000030387	FDXACB1	100	72.436	Nomascus_leucogenys
ENSMUSG00000037845	Fdxacb1	100	60.897	ENSMEUG00000003077	FDXACB1	99	61.058	Notamacropus_eugenii
ENSMUSG00000037845	Fdxacb1	100	65.920	ENSOPRG00000012593	FDXACB1	99	65.920	Ochotona_princeps
ENSMUSG00000037845	Fdxacb1	100	70.305	ENSODEG00000010360	FDXACB1	100	70.305	Octodon_degus
ENSMUSG00000037845	Fdxacb1	99	36.538	ENSONIG00000004939	fdxacb1	99	36.538	Oreochromis_niloticus
ENSMUSG00000037845	Fdxacb1	100	51.360	ENSOANG00000003844	-	99	51.360	Ornithorhynchus_anatinus
ENSMUSG00000037845	Fdxacb1	99	33.689	ENSORLG00020008420	fdxacb1	99	33.689	Oryzias_latipes_hni
ENSMUSG00000037845	Fdxacb1	99	35.115	ENSOMEG00000019353	fdxacb1	99	35.115	Oryzias_melastigma
ENSMUSG00000037845	Fdxacb1	100	71.314	ENSOARG00000015064	FDXACB1	99	71.314	Ovis_aries
ENSMUSG00000037845	Fdxacb1	100	71.635	ENSPPAG00000030196	FDXACB1	100	71.635	Pan_paniscus
ENSMUSG00000037845	Fdxacb1	100	71.474	ENSPPRG00000005967	FDXACB1	100	71.474	Panthera_pardus
ENSMUSG00000037845	Fdxacb1	100	71.314	ENSPTIG00000016420	FDXACB1	100	71.314	Panthera_tigris_altaica
ENSMUSG00000037845	Fdxacb1	100	71.635	ENSPTRG00000004272	FDXACB1	100	71.635	Pan_troglodytes
ENSMUSG00000037845	Fdxacb1	100	71.795	ENSPANG00000019268	FDXACB1	100	71.795	Papio_anubis
ENSMUSG00000037845	Fdxacb1	97	41.379	ENSPKIG00000009407	fdxacb1	99	40.960	Paramormyrops_kingsleyae
ENSMUSG00000037845	Fdxacb1	84	46.296	ENSPMGG00000004912	fdxacb1	96	46.296	Periophthalmus_magnuspinnatus
ENSMUSG00000037845	Fdxacb1	99	79.806	ENSPEMG00000020188	Fdxacb1	99	79.806	Peromyscus_maniculatus_bairdii
ENSMUSG00000037845	Fdxacb1	99	35.940	ENSPFOG00000022156	fdxacb1	99	35.940	Poecilia_formosa
ENSMUSG00000037845	Fdxacb1	99	35.940	ENSPLAG00000019966	fdxacb1	99	35.940	Poecilia_latipinna
ENSMUSG00000037845	Fdxacb1	99	35.940	ENSPMEG00000002110	fdxacb1	99	35.940	Poecilia_mexicana
ENSMUSG00000037845	Fdxacb1	99	35.586	ENSPREG00000017453	fdxacb1	99	35.586	Poecilia_reticulata
ENSMUSG00000037845	Fdxacb1	100	71.154	ENSPPYG00000003866	FDXACB1	99	71.154	Pongo_abelii
ENSMUSG00000037845	Fdxacb1	100	68.910	ENSPCAG00000000333	FDXACB1	99	69.071	Procavia_capensis
ENSMUSG00000037845	Fdxacb1	100	72.436	ENSPCOG00000027443	FDXACB1	100	72.436	Propithecus_coquereli
ENSMUSG00000037845	Fdxacb1	100	71.750	ENSPVAG00000009610	FDXACB1	99	71.750	Pteropus_vampyrus
ENSMUSG00000037845	Fdxacb1	99	34.384	ENSPNYG00000012981	fdxacb1	99	34.384	Pundamilia_nyererei
ENSMUSG00000037845	Fdxacb1	98	40.615	ENSPNAG00000003284	fdxacb1	99	40.382	Pygocentrus_nattereri
ENSMUSG00000037845	Fdxacb1	90	87.611	ENSRNOG00000010743	Fdxacb1	97	87.611	Rattus_norvegicus
ENSMUSG00000037845	Fdxacb1	100	71.795	ENSRBIG00000014195	FDXACB1	100	71.795	Rhinopithecus_bieti
ENSMUSG00000037845	Fdxacb1	100	71.635	ENSRROG00000045453	FDXACB1	100	71.635	Rhinopithecus_roxellana
ENSMUSG00000037845	Fdxacb1	100	71.474	ENSSBOG00000027732	FDXACB1	100	71.474	Saimiri_boliviensis_boliviensis
ENSMUSG00000037845	Fdxacb1	99	39.685	ENSSFOG00015009862	fdxacb1	99	40.000	Scleropages_formosus
ENSMUSG00000037845	Fdxacb1	99	34.139	ENSSMAG00000010250	fdxacb1	99	34.139	Scophthalmus_maximus
ENSMUSG00000037845	Fdxacb1	99	35.163	ENSSDUG00000004461	fdxacb1	98	35.163	Seriola_dumerili
ENSMUSG00000037845	Fdxacb1	99	34.718	ENSSLDG00000017388	fdxacb1	98	34.718	Seriola_lalandi_dorsalis
ENSMUSG00000037845	Fdxacb1	100	66.506	ENSSARG00000002541	FDXACB1	99	66.506	Sorex_araneus
ENSMUSG00000037845	Fdxacb1	99	47.402	ENSSPUG00000010598	FDXACB1	99	47.402	Sphenodon_punctatus
ENSMUSG00000037845	Fdxacb1	99	35.426	ENSSPAG00000007903	fdxacb1	99	35.426	Stegastes_partitus
ENSMUSG00000037845	Fdxacb1	100	71.680	ENSSSCG00000021871	FDXACB1	100	71.680	Sus_scrofa
ENSMUSG00000037845	Fdxacb1	99	48.792	ENSTGUG00000000326	FDXACB1	99	48.792	Taeniopygia_guttata
ENSMUSG00000037845	Fdxacb1	99	37.821	ENSTRUG00000017134	fdxacb1	99	37.821	Takifugu_rubripes
ENSMUSG00000037845	Fdxacb1	99	36.554	ENSTNIG00000009977	fdxacb1	99	36.554	Tetraodon_nigroviridis
ENSMUSG00000037845	Fdxacb1	100	69.551	ENSTBEG00000010204	FDXACB1	99	69.551	Tupaia_belangeri
ENSMUSG00000037845	Fdxacb1	100	72.596	ENSTTRG00000010496	FDXACB1	99	72.596	Tursiops_truncatus
ENSMUSG00000037845	Fdxacb1	100	72.115	ENSUAMG00000018595	FDXACB1	100	72.115	Ursus_americanus
ENSMUSG00000037845	Fdxacb1	100	72.115	ENSUMAG00000006940	FDXACB1	100	72.115	Ursus_maritimus
ENSMUSG00000037845	Fdxacb1	90	74.766	ENSVPAG00000000044	FDXACB1	89	74.766	Vicugna_pacos
ENSMUSG00000037845	Fdxacb1	100	71.108	ENSVVUG00000015845	FDXACB1	100	71.108	Vulpes_vulpes
ENSMUSG00000037845	Fdxacb1	99	40.566	ENSXETG00000010172	fdxacb1	99	40.566	Xenopus_tropicalis
ENSMUSG00000037845	Fdxacb1	99	36.160	ENSXCOG00000007930	fdxacb1	96	45.205	Xiphophorus_couchianus
ENSMUSG00000037845	Fdxacb1	99	35.435	ENSXMAG00000010929	fdxacb1	99	35.435	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0070042	rRNA (uridine-N3-)-methyltransferase activity	21873635.	IBA	Function
GO:0070475	rRNA base methylation	21873635.	IBA	Process