EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000037965 (Gene tree)
Gene ID: 106205
Gene Symbol: Zc3h7a
Alias: A430104C18Rik|Zc3h7
Full Name: zinc finger CCCH type containing 7 A
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 39802
Position: chr16: 11136592-11176393
Accession: 2445044
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000155340	-	516	-	-	- (aa)	-	-
ENSMUST00000155343	-	549	-	-	- (aa)	-	-
ENSMUST00000143121	-	521	-	-	- (aa)	-	-
ENSMUST00000143926	-	553	-	-	- (aa)	-	-
ENSMUST00000138185	-	2428	-	ENSMUSP00000119480	762 (aa)	-	E9Q8M5
ENSMUST00000139391	-	925	-	-	- (aa)	-	-
ENSMUST00000142844	-	662	-	-	- (aa)	-	-
ENSMUST00000140898	-	748	-	ENSMUSP00000118771	174 (aa)	-	F6X2N3
ENSMUST00000155255	-	1346	-	-	- (aa)	-	-
ENSMUST00000145457	-	2272	-	-	- (aa)	-	-
ENSMUST00000142389	-	414	-	ENSMUSP00000114432	84 (aa)	-	D3YVH9
ENSMUST00000128083	-	2067	-	ENSMUSP00000114246	583 (aa)	-	E9Q0D3
ENSMUST00000138282	-	699	-	-	- (aa)	-	-
ENSMUST00000140755	-	2763	-	ENSMUSP00000120720	390 (aa)	-	D6RI42
ENSMUST00000130355	-	730	-	ENSMUSP00000120931	206 (aa)	-	D3YZY2
ENSMUST00000037633	-	3825	XM_006521664	ENSMUSP00000041308	970 (aa)	XP_006521727	E9PWW6
ENSMUST00000125537	-	349	-	ENSMUSP00000122525	87 (aa)	-	D3Z5I3
ENSMUST00000140775	-	829	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000037965's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000037965's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000037965	Zc3h7a	95	59.036	ENSDARG00000102195	zc3h7a	100	50.347	Danio_rerio
ENSMUSG00000037965	Zc3h7a	96	44.498	ENSDARG00000055930	zc3h7bb	98	39.059	Danio_rerio

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005575	cellular_component	-	ND	Component
GO:0010608	posttranscriptional regulation of gene expression	-	ISO	Process
GO:0035196	production of miRNAs involved in gene silencing by miRNA	-	ISO	Process
GO:0035198	miRNA binding	-	ISO	Function