EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000038116 (Gene tree)
Gene ID: 228829
Gene Symbol: Phf20
Alias: 6820402O20Rik
Full Name: PHD finger protein 20
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 113487
Position: chr2: 156196466-156309952
Accession: 2444148
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000132352	-	703	-	-	- (aa)	-	-
ENSMUST00000147242	-	368	-	-	- (aa)	-	-
ENSMUST00000145731	-	453	-	ENSMUSP00000119756	113 (aa)	-	A2AV92
ENSMUST00000152617	-	5524	-	-	- (aa)	-	-
ENSMUST00000132129	-	2896	-	-	- (aa)	-	-
ENSMUST00000153822	-	605	-	-	- (aa)	-	-
ENSMUST00000135796	-	702	-	-	- (aa)	-	-
ENSMUST00000122814	-	903	-	-	- (aa)	-	-
ENSMUST00000037401	-	5737	XM_006499338	ENSMUSP00000043138	1010 (aa)	XP_006499401	Q8BLG0
ENSMUST00000147234	-	377	-	-	- (aa)	-	-
ENSMUST00000131479	-	605	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000038116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000038116's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000123	histone acetyltransferase complex	21873635.	IBA	Component
GO:0000123	histone acetyltransferase complex	-	ISO	Component
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006325	chromatin organization	-	IEA	Process
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0031965	nuclear membrane	-	ISO	Component
GO:0043981	histone H4-K5 acetylation	21873635.	IBA	Process
GO:0043981	histone H4-K5 acetylation	-	ISO	Process
GO:0043982	histone H4-K8 acetylation	21873635.	IBA	Process
GO:0043982	histone H4-K8 acetylation	-	ISO	Process
GO:0043984	histone H4-K16 acetylation	21873635.	IBA	Process
GO:0043984	histone H4-K16 acetylation	-	ISO	Process
GO:0043995	histone acetyltransferase activity (H4-K5 specific)	21873635.	IBA	Function
GO:0043995	histone acetyltransferase activity (H4-K5 specific)	-	ISO	Function
GO:0043996	histone acetyltransferase activity (H4-K8 specific)	21873635.	IBA	Function
GO:0043996	histone acetyltransferase activity (H4-K8 specific)	-	ISO	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0046972	histone acetyltransferase activity (H4-K16 specific)	21873635.	IBA	Function
GO:0046972	histone acetyltransferase activity (H4-K16 specific)	-	ISO	Function
GO:0071339	MLL1 complex	-	ISO	Component