EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000038299 (Gene tree)
Gene ID: 225348
Gene Symbol: Wdr36
Alias: 5730444A13Rik
Full Name: WD repeat domain 36
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 30370 bases
Position: chr18:32837225-32867594
Accession: 1917819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000052465	Utp21	PF04192.12	3.5e-68	1	1
ENSMUSP00000132189	Utp21	PF04192.12	8.1e-60	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000234158	-	2330	-	-	- (aa)	-	-
ENSMUST00000234798	-	3063	-	-	- (aa)	-	-
ENSMUST00000053663	-	4455	-	ENSMUSP00000052465	899 (aa)	-	Q3TAQ9
ENSMUST00000166214	-	2906	XM_006525847	ENSMUSP00000132189	883 (aa)	XP_006525910	Q3TA68
ENSMUST00000234434	-	2666	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000038299's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000038299's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000038299	Wdr36	99	88.978	ENSG00000134987	WDR36	100	88.839	Homo_sapiens
ENSMUSG00000038299	Wdr36	99	88.740	ENSAMEG00000012756	WDR36	95	88.740	Ailuropoda_melanoleuca
ENSMUSG00000038299	Wdr36	99	59.168	ENSACIG00000014835	wdr36	99	59.055	Amphilophus_citrinellus
ENSMUSG00000038299	Wdr36	99	56.517	ENSAOCG00000005280	wdr36	99	56.517	Amphiprion_ocellaris
ENSMUSG00000038299	Wdr36	99	56.566	ENSAPEG00000000335	wdr36	99	56.566	Amphiprion_percula
ENSMUSG00000038299	Wdr36	99	58.380	ENSATEG00000023085	wdr36	99	58.605	Anabas_testudineus
ENSMUSG00000038299	Wdr36	94	72.189	ENSAPLG00000012829	WDR36	100	72.189	Anas_platyrhynchos
ENSMUSG00000038299	Wdr36	99	70.516	ENSACAG00000007141	WDR36	99	70.516	Anolis_carolinensis
ENSMUSG00000038299	Wdr36	99	88.728	ENSANAG00000018849	WDR36	100	88.728	Aotus_nancymaae
ENSMUSG00000038299	Wdr36	99	58.155	ENSACLG00000007577	wdr36	99	58.155	Astatotilapia_calliptera
ENSMUSG00000038299	Wdr36	99	66.145	ENSAMXG00000006706	wdr36	99	66.145	Astyanax_mexicanus
ENSMUSG00000038299	Wdr36	93	85.749	ENSBTAG00000005489	WDR36	96	85.749	Bos_taurus
ENSMUSG00000038299	Wdr36	99	88.170	ENSBTAG00000053476	WDR36	100	88.170	Bos_taurus
ENSMUSG00000038299	Wdr36	99	88.978	ENSCJAG00000016277	WDR36	94	88.641	Callithrix_jacchus
ENSMUSG00000038299	Wdr36	99	87.444	ENSCAFG00000007387	WDR36	100	87.444	Canis_familiaris
ENSMUSG00000038299	Wdr36	99	87.584	ENSCAFG00020013444	WDR36	99	87.584	Canis_lupus_dingo
ENSMUSG00000038299	Wdr36	99	88.728	ENSCHIG00000026685	WDR36	100	88.728	Capra_hircus
ENSMUSG00000038299	Wdr36	99	87.835	ENSTSYG00000003163	WDR36	100	87.835	Carlito_syrichta
ENSMUSG00000038299	Wdr36	75	78.149	ENSCAPG00000005041	WDR36	84	78.116	Cavia_aperea
ENSMUSG00000038299	Wdr36	99	88.876	ENSCPOG00000014638	WDR36	98	88.876	Cavia_porcellus
ENSMUSG00000038299	Wdr36	99	88.504	ENSCCAG00000035644	WDR36	100	88.504	Cebus_capucinus
ENSMUSG00000038299	Wdr36	99	88.978	ENSCATG00000035085	WDR36	97	88.753	Cercocebus_atys
ENSMUSG00000038299	Wdr36	99	88.289	ENSCLAG00000005745	WDR36	99	88.196	Chinchilla_lanigera
ENSMUSG00000038299	Wdr36	99	89.093	ENSCSAG00000014980	WDR36	97	88.864	Chlorocebus_sabaeus
ENSMUSG00000038299	Wdr36	96	77.529	ENSCHOG00000011273	WDR36	94	77.529	Choloepus_hoffmanni
ENSMUSG00000038299	Wdr36	98	73.198	ENSCPBG00000013928	WDR36	99	74.300	Chrysemys_picta_bellii
ENSMUSG00000038299	Wdr36	98	46.681	ENSCING00000005687	-	99	46.681	Ciona_intestinalis
ENSMUSG00000038299	Wdr36	99	89.093	ENSCANG00000034270	WDR36	97	88.753	Colobus_angolensis_palliatus
ENSMUSG00000038299	Wdr36	99	94.030	ENSCGRG00001012983	Wdr36	99	93.922	Cricetulus_griseus_chok1gshd
ENSMUSG00000038299	Wdr36	94	93.468	ENSCGRG00000013589	Wdr36	100	93.468	Cricetulus_griseus_crigri
ENSMUSG00000038299	Wdr36	93	57.844	ENSCSEG00000020460	wdr36	99	57.964	Cynoglossus_semilaevis
ENSMUSG00000038299	Wdr36	99	58.969	ENSCVAG00000022841	wdr36	99	59.081	Cyprinodon_variegatus
ENSMUSG00000038299	Wdr36	99	64.922	ENSDARG00000004774	wdr36	100	64.922	Danio_rerio
ENSMUSG00000038299	Wdr36	99	88.839	ENSDNOG00000004563	WDR36	100	88.839	Dasypus_novemcinctus
ENSMUSG00000038299	Wdr36	99	88.951	ENSDORG00000005468	-	100	88.951	Dipodomys_ordii
ENSMUSG00000038299	Wdr36	97	40.593	FBgn0038146	CG9799	96	40.203	Drosophila_melanogaster
ENSMUSG00000038299	Wdr36	93	82.188	ENSETEG00000016513	WDR36	88	82.188	Echinops_telfairi
ENSMUSG00000038299	Wdr36	93	41.190	ENSEBUG00000000461	wdr36	97	41.071	Eptatretus_burgeri
ENSMUSG00000038299	Wdr36	99	89.397	ENSEASG00005015708	WDR36	100	89.397	Equus_asinus_asinus
ENSMUSG00000038299	Wdr36	99	89.509	ENSECAG00000017001	WDR36	100	89.509	Equus_caballus
ENSMUSG00000038299	Wdr36	99	87.471	ENSEEUG00000008078	WDR36	94	87.402	Erinaceus_europaeus
ENSMUSG00000038299	Wdr36	99	65.208	ENSELUG00000003875	wdr36	99	65.208	Esox_lucius
ENSMUSG00000038299	Wdr36	99	88.504	ENSFCAG00000022572	WDR36	100	88.504	Felis_catus
ENSMUSG00000038299	Wdr36	99	70.661	ENSFALG00000010688	WDR36	99	70.997	Ficedula_albicollis
ENSMUSG00000038299	Wdr36	99	89.162	ENSFDAG00000009199	WDR36	99	89.162	Fukomys_damarensis
ENSMUSG00000038299	Wdr36	82	65.060	ENSFHEG00000006019	wdr36	99	65.060	Fundulus_heteroclitus
ENSMUSG00000038299	Wdr36	67	53.524	ENSGMOG00000009386	wdr36	95	53.524	Gadus_morhua
ENSMUSG00000038299	Wdr36	99	71.622	ENSGALG00000000247	WDR36	99	71.622	Gallus_gallus
ENSMUSG00000038299	Wdr36	58	52.896	ENSGAFG00000017276	wdr36	90	52.896	Gambusia_affinis
ENSMUSG00000038299	Wdr36	99	56.982	ENSGACG00000015461	wdr36	99	56.982	Gasterosteus_aculeatus
ENSMUSG00000038299	Wdr36	100	71.696	ENSGAGG00000016861	WDR36	100	71.696	Gopherus_agassizii
ENSMUSG00000038299	Wdr36	99	89.323	ENSGGOG00000026914	WDR36	94	89.087	Gorilla_gorilla
ENSMUSG00000038299	Wdr36	95	57.963	ENSHBUG00000010472	wdr36	99	58.486	Haplochromis_burtoni
ENSMUSG00000038299	Wdr36	99	88.863	ENSHGLG00000008804	WDR36	99	88.641	Heterocephalus_glaber_female
ENSMUSG00000038299	Wdr36	99	88.749	ENSHGLG00100004891	WDR36	99	88.517	Heterocephalus_glaber_male
ENSMUSG00000038299	Wdr36	99	56.201	ENSHCOG00000001592	wdr36	100	56.313	Hippocampus_comes
ENSMUSG00000038299	Wdr36	99	65.960	ENSIPUG00000017751	wdr36	99	65.960	Ictalurus_punctatus
ENSMUSG00000038299	Wdr36	100	88.877	ENSSTOG00000014672	WDR36	89	88.877	Ictidomys_tridecemlineatus
ENSMUSG00000038299	Wdr36	99	89.310	ENSJJAG00000023683	-	100	89.174	Jaculus_jaculus
ENSMUSG00000038299	Wdr36	76	57.185	ENSKMAG00000015303	wdr36	100	57.185	Kryptolebias_marmoratus
ENSMUSG00000038299	Wdr36	98	59.076	ENSLBEG00000020493	wdr36	99	59.147	Labrus_bergylta
ENSMUSG00000038299	Wdr36	99	68.799	ENSLACG00000009326	WDR36	100	69.570	Latimeria_chalumnae
ENSMUSG00000038299	Wdr36	99	67.857	ENSLOCG00000010374	wdr36	99	67.857	Lepisosteus_oculatus
ENSMUSG00000038299	Wdr36	100	87.653	ENSLAFG00000009957	WDR36	100	87.653	Loxodonta_africana
ENSMUSG00000038299	Wdr36	99	89.093	ENSMFAG00000001782	WDR36	97	88.864	Macaca_fascicularis
ENSMUSG00000038299	Wdr36	99	88.978	ENSMMUG00000004670	WDR36	100	88.839	Macaca_mulatta
ENSMUSG00000038299	Wdr36	99	89.093	ENSMNEG00000037202	WDR36	97	88.864	Macaca_nemestrina
ENSMUSG00000038299	Wdr36	99	88.839	ENSMLEG00000041259	WDR36	100	88.839	Mandrillus_leucophaeus
ENSMUSG00000038299	Wdr36	98	57.324	ENSMAMG00000012989	wdr36	99	58.244	Mastacembelus_armatus
ENSMUSG00000038299	Wdr36	99	58.380	ENSMZEG00005023368	wdr36	99	58.380	Maylandia_zebra
ENSMUSG00000038299	Wdr36	94	60.839	ENSMGAG00000006803	WDR36	100	60.839	Meleagris_gallopavo
ENSMUSG00000038299	Wdr36	89	93.257	ENSMAUG00000018806	Wdr36	99	93.257	Mesocricetus_auratus
ENSMUSG00000038299	Wdr36	99	88.634	ENSMICG00000000645	WDR36	95	88.530	Microcebus_murinus
ENSMUSG00000038299	Wdr36	99	93.685	ENSMOCG00000012782	Wdr36	99	93.653	Microtus_ochrogaster
ENSMUSG00000038299	Wdr36	99	56.902	ENSMMOG00000021162	wdr36	99	56.902	Mola_mola
ENSMUSG00000038299	Wdr36	99	78.989	ENSMODG00000015652	WDR36	99	78.989	Monodelphis_domestica
ENSMUSG00000038299	Wdr36	99	55.095	ENSMALG00000013338	wdr36	99	55.095	Monopterus_albus
ENSMUSG00000038299	Wdr36	100	98.554	MGP_CAROLIEiJ_G0022079	Wdr36	100	98.554	Mus_caroli
ENSMUSG00000038299	Wdr36	100	96.997	MGP_PahariEiJ_G0018813	Wdr36	100	96.997	Mus_pahari
ENSMUSG00000038299	Wdr36	100	99.444	MGP_SPRETEiJ_G0022991	Wdr36	100	99.444	Mus_spretus
ENSMUSG00000038299	Wdr36	99	89.286	ENSMPUG00000012646	WDR36	100	89.286	Mustela_putorius_furo
ENSMUSG00000038299	Wdr36	99	88.087	ENSMLUG00000002381	WDR36	99	87.889	Myotis_lucifugus
ENSMUSG00000038299	Wdr36	99	91.389	ENSNGAG00000015392	Wdr36	99	90.980	Nannospalax_galili
ENSMUSG00000038299	Wdr36	96	57.643	ENSNBRG00000005131	wdr36	97	57.643	Neolamprologus_brichardi
ENSMUSG00000038299	Wdr36	99	88.978	ENSNLEG00000011395	WDR36	100	86.830	Nomascus_leucogenys
ENSMUSG00000038299	Wdr36	64	80.220	ENSMEUG00000009146	-	65	80.220	Notamacropus_eugenii
ENSMUSG00000038299	Wdr36	64	81.319	ENSOPRG00000001327	-	77	81.319	Ochotona_princeps
ENSMUSG00000038299	Wdr36	99	88.519	ENSODEG00000002759	WDR36	99	88.406	Octodon_degus
ENSMUSG00000038299	Wdr36	99	58.605	ENSONIG00000012551	wdr36	99	58.605	Oreochromis_niloticus
ENSMUSG00000038299	Wdr36	99	74.916	ENSOANG00000015157	WDR36	100	74.916	Ornithorhynchus_anatinus
ENSMUSG00000038299	Wdr36	99	89.397	ENSOCUG00000003129	WDR36	100	89.397	Oryctolagus_cuniculus
ENSMUSG00000038299	Wdr36	99	57.416	ENSORLG00000019652	wdr36	99	57.528	Oryzias_latipes
ENSMUSG00000038299	Wdr36	99	57.528	ENSORLG00020018961	wdr36	99	57.640	Oryzias_latipes_hni
ENSMUSG00000038299	Wdr36	99	57.545	ENSORLG00015007362	wdr36	99	57.545	Oryzias_latipes_hsok
ENSMUSG00000038299	Wdr36	99	57.865	ENSOMEG00000005342	wdr36	99	57.978	Oryzias_melastigma
ENSMUSG00000038299	Wdr36	99	87.729	ENSOGAG00000000608	WDR36	99	87.653	Otolemur_garnettii
ENSMUSG00000038299	Wdr36	99	88.616	ENSOARG00000018968	WDR36	94	88.616	Ovis_aries
ENSMUSG00000038299	Wdr36	99	89.174	ENSPPAG00000023560	WDR36	100	89.174	Pan_paniscus
ENSMUSG00000038299	Wdr36	99	89.062	ENSPPRG00000005832	WDR36	100	89.062	Panthera_pardus
ENSMUSG00000038299	Wdr36	99	88.839	ENSPTIG00000009401	WDR36	100	88.839	Panthera_tigris_altaica
ENSMUSG00000038299	Wdr36	99	89.323	ENSPTRG00000017128	WDR36	94	89.087	Pan_troglodytes
ENSMUSG00000038299	Wdr36	99	89.093	ENSPANG00000004679	WDR36	97	88.864	Papio_anubis
ENSMUSG00000038299	Wdr36	96	65.777	ENSPKIG00000025589	wdr36	99	65.777	Paramormyrops_kingsleyae
ENSMUSG00000038299	Wdr36	99	71.991	ENSPSIG00000011688	WDR36	99	71.991	Pelodiscus_sinensis
ENSMUSG00000038299	Wdr36	99	54.658	ENSPMGG00000006948	wdr36	99	54.882	Periophthalmus_magnuspinnatus
ENSMUSG00000038299	Wdr36	99	94.368	ENSPEMG00000017285	Wdr36	99	94.203	Peromyscus_maniculatus_bairdii
ENSMUSG00000038299	Wdr36	94	51.004	ENSPMAG00000007054	wdr36	100	51.179	Petromyzon_marinus
ENSMUSG00000038299	Wdr36	98	79.007	ENSPCIG00000004387	WDR36	99	78.723	Phascolarctos_cinereus
ENSMUSG00000038299	Wdr36	99	56.951	ENSPFOG00000001899	wdr36	99	57.063	Poecilia_formosa
ENSMUSG00000038299	Wdr36	95	57.227	ENSPLAG00000008165	wdr36	98	57.346	Poecilia_latipinna
ENSMUSG00000038299	Wdr36	99	57.063	ENSPMEG00000014702	wdr36	99	57.175	Poecilia_mexicana
ENSMUSG00000038299	Wdr36	88	56.964	ENSPREG00000017144	wdr36	99	56.964	Poecilia_reticulata
ENSMUSG00000038299	Wdr36	99	88.839	ENSPPYG00000015679	WDR36	100	88.839	Pongo_abelii
ENSMUSG00000038299	Wdr36	91	85.014	ENSPCAG00000015799	WDR36	80	87.556	Procavia_capensis
ENSMUSG00000038299	Wdr36	99	77.778	ENSPCOG00000020442	WDR36	95	77.778	Propithecus_coquereli
ENSMUSG00000038299	Wdr36	99	89.093	ENSPVAG00000001900	WDR36	95	88.864	Pteropus_vampyrus
ENSMUSG00000038299	Wdr36	99	58.155	ENSPNYG00000011708	wdr36	99	58.155	Pundamilia_nyererei
ENSMUSG00000038299	Wdr36	85	65.189	ENSPNAG00000007572	wdr36	92	65.189	Pygocentrus_nattereri
ENSMUSG00000038299	Wdr36	99	95.063	ENSRNOG00000027355	Wdr36	100	94.989	Rattus_norvegicus
ENSMUSG00000038299	Wdr36	99	88.175	ENSRBIG00000040788	WDR36	97	88.530	Rhinopithecus_bieti
ENSMUSG00000038299	Wdr36	84	88.142	ENSRROG00000042369	WDR36	100	88.142	Rhinopithecus_roxellana
ENSMUSG00000038299	Wdr36	96	31.451	YLR409C	-	94	31.672	Saccharomyces_cerevisiae
ENSMUSG00000038299	Wdr36	99	87.141	ENSSBOG00000031972	WDR36	95	86.860	Saimiri_boliviensis_boliviensis
ENSMUSG00000038299	Wdr36	93	78.929	ENSSHAG00000003687	WDR36	100	78.929	Sarcophilus_harrisii
ENSMUSG00000038299	Wdr36	99	67.568	ENSSFOG00015011783	wdr36	99	67.568	Scleropages_formosus
ENSMUSG00000038299	Wdr36	98	57.256	ENSSMAG00000008869	wdr36	99	57.416	Scophthalmus_maximus
ENSMUSG00000038299	Wdr36	95	58.164	ENSSDUG00000002806	wdr36	96	58.244	Seriola_dumerili
ENSMUSG00000038299	Wdr36	98	54.689	ENSSLDG00000001712	wdr36	99	54.668	Seriola_lalandi_dorsalis
ENSMUSG00000038299	Wdr36	93	86.350	ENSSARG00000014158	WDR36	93	86.350	Sorex_araneus
ENSMUSG00000038299	Wdr36	99	72.635	ENSSPUG00000015643	WDR36	99	72.635	Sphenodon_punctatus
ENSMUSG00000038299	Wdr36	99	56.292	ENSSPAG00000011530	wdr36	99	56.404	Stegastes_partitus
ENSMUSG00000038299	Wdr36	99	88.504	ENSSSCG00000014199	WDR36	100	88.821	Sus_scrofa
ENSMUSG00000038299	Wdr36	93	67.784	ENSTGUG00000000989	WDR36	100	68.144	Taeniopygia_guttata
ENSMUSG00000038299	Wdr36	99	57.705	ENSTRUG00000008438	wdr36	99	57.930	Takifugu_rubripes
ENSMUSG00000038299	Wdr36	99	57.865	ENSTNIG00000013251	wdr36	99	57.865	Tetraodon_nigroviridis
ENSMUSG00000038299	Wdr36	93	80.649	ENSTBEG00000013126	WDR36	100	80.649	Tupaia_belangeri
ENSMUSG00000038299	Wdr36	99	86.830	ENSTTRG00000000590	WDR36	95	86.830	Tursiops_truncatus
ENSMUSG00000038299	Wdr36	99	88.393	ENSUAMG00000016133	WDR36	100	88.393	Ursus_americanus
ENSMUSG00000038299	Wdr36	99	88.616	ENSUMAG00000015661	WDR36	100	88.616	Ursus_maritimus
ENSMUSG00000038299	Wdr36	99	87.945	ENSVPAG00000011242	WDR36	94	87.751	Vicugna_pacos
ENSMUSG00000038299	Wdr36	99	86.452	ENSVVUG00000012684	WDR36	100	88.214	Vulpes_vulpes
ENSMUSG00000038299	Wdr36	100	67.110	ENSXETG00000011004	wdr36	99	67.220	Xenopus_tropicalis
ENSMUSG00000038299	Wdr36	95	50.359	ENSXCOG00000000434	wdr36	100	49.402	Xiphophorus_couchianus
ENSMUSG00000038299	Wdr36	99	57.623	ENSXMAG00000005092	wdr36	99	57.735	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001895	retina homeostasis	20631153.	IMP	Process
GO:0005730	nucleolus	-	ISO	Component
GO:0006364	rRNA processing	21873635.	IBA	Process
GO:0030516	regulation of axon extension	20631153.	IMP	Process
GO:0032040	small-subunit processome	21873635.	IBA	Component
GO:0034388	Pwp2p-containing subcomplex of 90S preribosome	21873635.	IBA	Component