EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000038346 (Gene tree)
Gene ID
269800
Gene Symbol
Zfp384
Alias
C130073D16Rik|Ciz|Nmp4
Full Name
zinc finger protein 384
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Plus strand
Length
28726 bases
Position
chr6:125009145-125037870
Accession
2443203
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000108043zf-C2H2PF00096.264.9e-3617
ENSMUSP00000108043zf-C2H2PF00096.264.9e-3627
ENSMUSP00000108043zf-C2H2PF00096.264.9e-3637
ENSMUSP00000108043zf-C2H2PF00096.264.9e-3647
ENSMUSP00000108043zf-C2H2PF00096.264.9e-3657
ENSMUSP00000108043zf-C2H2PF00096.264.9e-3667
ENSMUSP00000108043zf-C2H2PF00096.264.9e-3677
ENSMUSP00000081296zf-C2H2PF00096.266.3e-3617
ENSMUSP00000081296zf-C2H2PF00096.266.3e-3627
ENSMUSP00000081296zf-C2H2PF00096.266.3e-3637
ENSMUSP00000081296zf-C2H2PF00096.266.3e-3647
ENSMUSP00000081296zf-C2H2PF00096.266.3e-3657
ENSMUSP00000081296zf-C2H2PF00096.266.3e-3667
ENSMUSP00000081296zf-C2H2PF00096.266.3e-3677
ENSMUSP00000085648zf-C2H2PF00096.266.3e-3617
ENSMUSP00000085648zf-C2H2PF00096.266.3e-3627
ENSMUSP00000085648zf-C2H2PF00096.266.3e-3637
ENSMUSP00000085648zf-C2H2PF00096.266.3e-3647
ENSMUSP00000085648zf-C2H2PF00096.266.3e-3657
ENSMUSP00000085648zf-C2H2PF00096.266.3e-3667
ENSMUSP00000085648zf-C2H2PF00096.266.3e-3677
ENSMUSP00000108046zf-C2H2PF00096.266.3e-3617
ENSMUSP00000108046zf-C2H2PF00096.266.3e-3627
ENSMUSP00000108046zf-C2H2PF00096.266.3e-3637
ENSMUSP00000108046zf-C2H2PF00096.266.3e-3647
ENSMUSP00000108046zf-C2H2PF00096.266.3e-3657
ENSMUSP00000108046zf-C2H2PF00096.266.3e-3667
ENSMUSP00000108046zf-C2H2PF00096.266.3e-3677
ENSMUSP00000086354zf-C2H2PF00096.268.1e-2715
ENSMUSP00000086354zf-C2H2PF00096.268.1e-2725
ENSMUSP00000086354zf-C2H2PF00096.268.1e-2735
ENSMUSP00000086354zf-C2H2PF00096.268.1e-2745
ENSMUSP00000086354zf-C2H2PF00096.268.1e-2755
ENSMUSP00000108044zf-C2H2PF00096.261.8e-2615
ENSMUSP00000108044zf-C2H2PF00096.261.8e-2625
ENSMUSP00000108044zf-C2H2PF00096.261.8e-2635
ENSMUSP00000108044zf-C2H2PF00096.261.8e-2645
ENSMUSP00000108044zf-C2H2PF00096.261.8e-2655
ENSMUSP00000037986zf-C2H2PF00096.263.8e-2515
ENSMUSP00000037986zf-C2H2PF00096.263.8e-2525
ENSMUSP00000037986zf-C2H2PF00096.263.8e-2535
ENSMUSP00000037986zf-C2H2PF00096.263.8e-2545
ENSMUSP00000037986zf-C2H2PF00096.263.8e-2555
ENSMUSP00000108047zf-C2H2PF00096.263.8e-2515
ENSMUSP00000108047zf-C2H2PF00096.263.8e-2525
ENSMUSP00000108047zf-C2H2PF00096.263.8e-2535
ENSMUSP00000108047zf-C2H2PF00096.263.8e-2545
ENSMUSP00000108047zf-C2H2PF00096.263.8e-2555
ENSMUSP00000108043zf-metPF12874.75.7e-0511
ENSMUSP00000081296zf-metPF12874.77.4e-0511
ENSMUSP00000085648zf-metPF12874.77.4e-0511
ENSMUSP00000108046zf-metPF12874.77.4e-0511
ENSMUSP00000086354zf-metPF12874.70.0001111
ENSMUSP00000108044zf-metPF12874.70.0002611
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27768875High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem CellsnIC & mESC2016.09He CDOI: 10.1016/j.molcel.2016.09.034
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000140835-2470--- (aa)--
ENSMUST00000088308-2875-ENSMUSP00000085648584 (aa)-E9Q1A5
ENSMUST00000145138-3603--- (aa)--
ENSMUST00000137325-3200--- (aa)--
ENSMUST00000054553-2451-ENSMUSP00000086354468 (aa)-D3YX49
ENSMUST00000132863-1861--- (aa)--
ENSMUST00000084275-2829-ENSMUSP00000081296584 (aa)-E9Q1A5
ENSMUST00000145566-2438--- (aa)--
ENSMUST00000112425-2691XM_006506204ENSMUSP00000108044523 (aa)XP_006506267E9QAR4
ENSMUST00000152752-628-ENSMUSP00000117330125 (aa)-D3Z517
ENSMUST00000112427-3072XM_006506203ENSMUSP00000108046584 (aa)XP_006506266E9Q1A5
ENSMUST00000144308-1864--- (aa)--
ENSMUST00000112428-3132XM_006506199ENSMUSP00000108047554 (aa)XP_006506262E9QAR1
ENSMUST00000046064-3108XM_006506200ENSMUSP00000037986554 (aa)XP_006506263E9QAR1
ENSMUST00000131555-719--- (aa)--
ENSMUST00000112424-2673XM_006506202ENSMUSP00000108043568 (aa)XP_006506265E9QAR6
Gene Model
Click here to download ENSMUSG00000038346's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000038346's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000038346Zfp38410096.062ENSG00000126746ZNF38410098.425Homo_sapiens
ENSMUSG00000038346Zfp3849550.498ENSAPOG00000001844-8078.824Acanthochromis_polyacanthus
ENSMUSG00000038346Zfp3849951.274ENSAPOG00000005130znf384l8078.824Acanthochromis_polyacanthus
ENSMUSG00000038346Zfp3849951.274ENSAPOG00000022749-8078.824Acanthochromis_polyacanthus
ENSMUSG00000038346Zfp38410095.770ENSAMEG00000014121ZNF38410095.770Ailuropoda_melanoleuca
ENSMUSG00000038346Zfp3849950.238ENSACIG00000023513znf384l8078.235Amphilophus_citrinellus
ENSMUSG00000038346Zfp3849953.846ENSACIG00000013508ZNF3848073.563Amphilophus_citrinellus
ENSMUSG00000038346Zfp3849952.039ENSAOCG00000008769znf384l8078.824Amphiprion_ocellaris
ENSMUSG00000038346Zfp3849950.874ENSAPEG00000014757znf384l8078.824Amphiprion_percula
ENSMUSG00000038346Zfp3849951.696ENSATEG00000000165znf384l8079.412Anabas_testudineus
ENSMUSG00000038346Zfp3849956.566ENSATEG00000020665-7971.839Anabas_testudineus
ENSMUSG00000038346Zfp38410093.664ENSANAG00000032088ZNF38410093.664Aotus_nancymaae
ENSMUSG00000038346Zfp3849552.265ENSACLG00000025353ZNF3847956.823Astatotilapia_calliptera
ENSMUSG00000038346Zfp3849950.883ENSACLG00000020430znf384l8078.235Astatotilapia_calliptera
ENSMUSG00000038346Zfp3849950.883ENSACLG00000006757-8078.235Astatotilapia_calliptera
ENSMUSG00000038346Zfp3849953.375ENSAMXG00000035967znf384l7978.736Astyanax_mexicanus
ENSMUSG00000038346Zfp3849954.296ENSAMXG00000032718si:ch211-154o6.27651.459Astyanax_mexicanus
ENSMUSG00000038346Zfp38410095.556ENSBTAG00000017072ZNF38410095.556Bos_taurus
ENSMUSG00000038346Zfp38410097.436ENSCJAG00000007944ZNF38410097.436Callithrix_jacchus
ENSMUSG00000038346Zfp38410097.089ENSCAFG00000014740ZNF38410097.089Canis_familiaris
ENSMUSG00000038346Zfp38410095.719ENSCAFG00020002932ZNF38410095.719Canis_lupus_dingo
ENSMUSG00000038346Zfp38410095.068ENSCHIG00000012248ZNF38410095.068Capra_hircus
ENSMUSG00000038346Zfp3847889.673ENSTSYG00000003178ZNF38410097.285Carlito_syrichta
ENSMUSG00000038346Zfp3845596.861ENSCAPG00000012608-10096.861Cavia_aperea
ENSMUSG00000038346Zfp38410096.928ENSCPOG00000012313ZNF38410096.928Cavia_porcellus
ENSMUSG00000038346Zfp38410097.260ENSCCAG00000032088ZNF38410097.260Cebus_capucinus
ENSMUSG00000038346Zfp38410097.260ENSCATG00000008991ZNF38410097.260Cercocebus_atys
ENSMUSG00000038346Zfp38410097.260ENSCLAG00000015550ZNF38410097.260Chinchilla_lanigera
ENSMUSG00000038346Zfp38410096.587ENSCSAG00000010379ZNF38410096.587Chlorocebus_sabaeus
ENSMUSG00000038346Zfp3849896.040ENSCHOG00000006697ZNF3848896.040Choloepus_hoffmanni
ENSMUSG00000038346Zfp3847992.949ENSCPBG00000027704ZNF3848382.793Chrysemys_picta_bellii
ENSMUSG00000038346Zfp38410097.109ENSCGRG00001013065Zfp38410097.109Cricetulus_griseus_chok1gshd
ENSMUSG00000038346Zfp38410097.109ENSCGRG00000015919Zfp38410097.109Cricetulus_griseus_crigri
ENSMUSG00000038346Zfp3847977.059ENSCSEG00000019134znf384l8079.412Cynoglossus_semilaevis
ENSMUSG00000038346Zfp3849953.535ENSCVAG00000022685-8073.563Cyprinodon_variegatus
ENSMUSG00000038346Zfp3849950.886ENSCVAG00000000607znf384l7580.000Cyprinodon_variegatus
ENSMUSG00000038346Zfp3849951.805ENSDARG00000001015znf384l8177.586Danio_rerio
ENSMUSG00000038346Zfp38410095.151ENSDNOG00000003936ZNF38410095.151Dasypus_novemcinctus
ENSMUSG00000038346Zfp3847981.897ENSELUG00000006251ZNF3848177.011Esox_lucius
ENSMUSG00000038346Zfp3849982.927ENSELUG00000020479znf384l8356.397Esox_lucius
ENSMUSG00000038346Zfp38410096.404ENSFCAG00000006882ZNF38410096.404Felis_catus
ENSMUSG00000038346Zfp38410094.521ENSFDAG00000007530ZNF38410094.521Fukomys_damarensis
ENSMUSG00000038346Zfp3849955.892ENSFHEG00000011373ZNF3848073.563Fundulus_heteroclitus
ENSMUSG00000038346Zfp3849951.579ENSGMOG00000015258ZNF3847574.706Gadus_morhua
ENSMUSG00000038346Zfp3849959.000ENSGACG00000001879znf384l8077.841Gasterosteus_aculeatus
ENSMUSG00000038346Zfp38410095.951ENSGGOG00000016048ZNF38410095.951Gorilla_gorilla
ENSMUSG00000038346Zfp3849950.720ENSHBUG00000009319znf384l8178.235Haplochromis_burtoni
ENSMUSG00000038346Zfp3849954.487ENSHBUG00000016733ZNF3848073.143Haplochromis_burtoni
ENSMUSG00000038346Zfp3849948.539ENSHCOG00000001659znf384l8355.809Hippocampus_comes
ENSMUSG00000038346Zfp3849950.493ENSHCOG00000012508-8157.692Hippocampus_comes
ENSMUSG00000038346Zfp3849954.861ENSIPUG00000004803si:ch211-154o6.27750.923Ictalurus_punctatus
ENSMUSG00000038346Zfp38410096.062ENSSTOG00000009902ZNF38410096.062Ictidomys_tridecemlineatus
ENSMUSG00000038346Zfp3849951.200ENSKMAG00000021584znf384l8079.412Kryptolebias_marmoratus
ENSMUSG00000038346Zfp3847981.212ENSLBEG00000014070znf384l8355.526Labrus_bergylta
ENSMUSG00000038346Zfp3849955.556ENSLBEG00000011133ZNF3847372.414Labrus_bergylta
ENSMUSG00000038346Zfp3847981.720ENSLACG00000010143ZNF3849574.938Latimeria_chalumnae
ENSMUSG00000038346Zfp3849951.577ENSLOCG00000007968znf384l8382.184Lepisosteus_oculatus
ENSMUSG00000038346Zfp38410095.848ENSLAFG00000008381ZNF3849695.848Loxodonta_africana
ENSMUSG00000038346Zfp38410097.183ENSMFAG00000037538ZNF38410097.183Macaca_fascicularis
ENSMUSG00000038346Zfp38410097.260ENSMMUG00000016990ZNF38410098.400Macaca_mulatta
ENSMUSG00000038346Zfp38410097.603ENSMNEG00000029452ZNF38410097.603Macaca_nemestrina
ENSMUSG00000038346Zfp38410097.260ENSMLEG00000027305ZNF38410097.260Mandrillus_leucophaeus
ENSMUSG00000038346Zfp3849954.701ENSMAMG00000003540ZNF3848072.000Mastacembelus_armatus
ENSMUSG00000038346Zfp3849951.208ENSMAMG00000014051znf384l7979.412Mastacembelus_armatus
ENSMUSG00000038346Zfp3849954.487ENSMZEG00005018208-8073.143Maylandia_zebra
ENSMUSG00000038346Zfp3849950.883ENSMZEG00005025974znf384l8078.235Maylandia_zebra
ENSMUSG00000038346Zfp38410095.392ENSMOCG00000022768Zfp38410095.392Microtus_ochrogaster
ENSMUSG00000038346Zfp3849961.299ENSMMOG00000015837-8071.591Mola_mola
ENSMUSG00000038346Zfp3847856.707ENSMMOG00000013506znf384l8356.237Mola_mola
ENSMUSG00000038346Zfp38410083.019ENSMODG00000018105ZNF38410083.390Monodelphis_domestica
ENSMUSG00000038346Zfp3849951.351ENSMALG00000009233znf384l8078.824Monopterus_albus
ENSMUSG00000038346Zfp3849954.514ENSMALG00000022522-8159.574Monopterus_albus
ENSMUSG00000038346Zfp38410098.973MGP_PahariEiJ_G0022625Zfp38410098.973Mus_pahari
ENSMUSG00000038346Zfp38410097.260ENSMPUG00000016838ZNF38410097.260Mustela_putorius_furo
ENSMUSG00000038346Zfp38410097.789ENSNGAG00000011316Zfp38410097.789Nannospalax_galili
ENSMUSG00000038346Zfp3849952.318ENSNBRG00000020830-8072.571Neolamprologus_brichardi
ENSMUSG00000038346Zfp3849941.121ENSNBRG00000018927znf384l8150.588Neolamprologus_brichardi
ENSMUSG00000038346Zfp38410097.436ENSNLEG00000004506ZNF38410097.436Nomascus_leucogenys
ENSMUSG00000038346Zfp38410095.890ENSOPRG00000003626ZNF38410095.890Ochotona_princeps
ENSMUSG00000038346Zfp38410096.062ENSODEG00000002585ZNF38410096.062Octodon_degus
ENSMUSG00000038346Zfp3849953.642ENSONIG00000004947znf384l8276.437Oreochromis_niloticus
ENSMUSG00000038346Zfp3849955.960ENSONIG00000013041ZNF3848071.508Oreochromis_niloticus
ENSMUSG00000038346Zfp38410096.233ENSOCUG00000003747ZNF38410096.233Oryctolagus_cuniculus
ENSMUSG00000038346Zfp3849952.862ENSORLG00000012835ZNF3848069.832Oryzias_latipes
ENSMUSG00000038346Zfp3849950.079ENSORLG00000006888znf384l7980.000Oryzias_latipes
ENSMUSG00000038346Zfp3849952.694ENSORLG00020003948ZNF3848069.832Oryzias_latipes_hni
ENSMUSG00000038346Zfp3849944.462ENSORLG00020010866znf384l10040.480Oryzias_latipes_hni
ENSMUSG00000038346Zfp3849951.282ENSORLG00015000861znf384l7980.000Oryzias_latipes_hsok
ENSMUSG00000038346Zfp3849952.862ENSORLG00015009575ZNF3848069.832Oryzias_latipes_hsok
ENSMUSG00000038346Zfp3849950.894ENSOMEG00000001063znf384l8179.412Oryzias_melastigma
ENSMUSG00000038346Zfp3849952.872ENSOMEG00000014386-7870.225Oryzias_melastigma
ENSMUSG00000038346Zfp3849693.972ENSOGAG00000010052ZNF38410093.972Otolemur_garnettii
ENSMUSG00000038346Zfp38410096.575ENSPPAG00000043539ZNF38410096.575Pan_paniscus
ENSMUSG00000038346Zfp38410096.062ENSPPRG00000006494ZNF38410096.062Panthera_pardus
ENSMUSG00000038346Zfp38410097.432ENSPTIG00000014865ZNF38410097.432Panthera_tigris_altaica
ENSMUSG00000038346Zfp38410095.951ENSPTRG00000004584ZNF38410095.951Pan_troglodytes
ENSMUSG00000038346Zfp38410097.260ENSPANG00000014845ZNF38410097.260Papio_anubis
ENSMUSG00000038346Zfp3849953.301ENSPKIG00000012153-7978.161Paramormyrops_kingsleyae
ENSMUSG00000038346Zfp3849951.282ENSPKIG00000002222znf384l6777.586Paramormyrops_kingsleyae
ENSMUSG00000038346Zfp3849852.862ENSPMGG00000007260-7170.286Periophthalmus_magnuspinnatus
ENSMUSG00000038346Zfp3849950.407ENSPMGG00000002902znf384l8077.586Periophthalmus_magnuspinnatus
ENSMUSG00000038346Zfp38410098.976ENSPEMG00000016282Zfp38410098.976Peromyscus_maniculatus_bairdii
ENSMUSG00000038346Zfp38410085.464ENSPCIG00000001942ZNF38410085.289Phascolarctos_cinereus
ENSMUSG00000038346Zfp3849950.709ENSPFOG00000001513znf384l8179.412Poecilia_formosa
ENSMUSG00000038346Zfp3849957.239ENSPFOG00000015360-8074.138Poecilia_formosa
ENSMUSG00000038346Zfp3849958.000ENSPLAG00000003243-8074.138Poecilia_latipinna
ENSMUSG00000038346Zfp3849950.079ENSPLAG00000009475znf384l8078.161Poecilia_latipinna
ENSMUSG00000038346Zfp3849957.239ENSPMEG00000005010-8074.138Poecilia_mexicana
ENSMUSG00000038346Zfp3849950.786ENSPMEG00000019030znf384l8079.412Poecilia_mexicana
ENSMUSG00000038346Zfp3847756.757ENSPREG00000007875znf384l9978.571Poecilia_reticulata
ENSMUSG00000038346Zfp38410096.918ENSPPYG00000004196ZNF38410096.918Pongo_abelii
ENSMUSG00000038346Zfp38410094.692ENSPVAG00000011440ZNF38410094.863Pteropus_vampyrus
ENSMUSG00000038346Zfp3849948.920ENSPNYG00000022622ZNF3848157.399Pundamilia_nyererei
ENSMUSG00000038346Zfp3849950.720ENSPNYG00000019270znf384l8178.235Pundamilia_nyererei
ENSMUSG00000038346Zfp3849952.839ENSPNAG00000010552znf384l10056.113Pygocentrus_nattereri
ENSMUSG00000038346Zfp38410098.632ENSRNOG00000017066Zfp38410098.632Rattus_norvegicus
ENSMUSG00000038346Zfp38410097.260ENSRBIG00000034371ZNF38410097.260Rhinopithecus_bieti
ENSMUSG00000038346Zfp38410097.603ENSRROG00000034990ZNF38410097.603Rhinopithecus_roxellana
ENSMUSG00000038346Zfp38410097.260ENSSBOG00000020182ZNF38410097.260Saimiri_boliviensis_boliviensis
ENSMUSG00000038346Zfp38410082.770ENSSHAG00000015330ZNF38410082.770Sarcophilus_harrisii
ENSMUSG00000038346Zfp3849953.323ENSSFOG00015023839znf384l8078.736Scleropages_formosus
ENSMUSG00000038346Zfp3849957.840ENSSFOG00015013893si:ch211-154o6.28054.768Scleropages_formosus
ENSMUSG00000038346Zfp3849976.970ENSSMAG00000017501-8456.583Scophthalmus_maximus
ENSMUSG00000038346Zfp3849952.320ENSSDUG00000010249znf384l7680.000Seriola_dumerili
ENSMUSG00000038346Zfp3847982.099ENSSLDG00000017138znf384l7980.000Seriola_lalandi_dorsalis
ENSMUSG00000038346Zfp3849946.512ENSSLDG00000024533-7951.134Seriola_lalandi_dorsalis
ENSMUSG00000038346Zfp3849951.060ENSSPAG00000009256znf384l8078.824Stegastes_partitus
ENSMUSG00000038346Zfp3849954.271ENSSPAG00000017553-7971.429Stegastes_partitus
ENSMUSG00000038346Zfp3849950.240ENSTRUG00000004550znf384l8078.235Takifugu_rubripes
ENSMUSG00000038346Zfp3849953.886ENSTRUG00000011097-7972.571Takifugu_rubripes
ENSMUSG00000038346Zfp3849953.595ENSTNIG00000000726znf384l8174.860Tetraodon_nigroviridis
ENSMUSG00000038346Zfp3849951.085ENSTNIG00000008018-8157.328Tetraodon_nigroviridis
ENSMUSG00000038346Zfp38410095.377ENSTTRG00000011754ZNF38410095.377Tursiops_truncatus
ENSMUSG00000038346Zfp38410097.089ENSUAMG00000022892ZNF38410097.089Ursus_americanus
ENSMUSG00000038346Zfp38410097.089ENSUMAG00000005073ZNF38410097.089Ursus_maritimus
ENSMUSG00000038346Zfp38410098.116ENSVVUG00000011329ZNF38410098.116Vulpes_vulpes
ENSMUSG00000038346Zfp3848352.734ENSXCOG00000013504znf384l7278.736Xiphophorus_couchianus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000978RNA polymerase II proximal promoter sequence-specific DNA binding-ISOFunction
GO:0001228DNA-binding transcription activator activity, RNA polymerase II-specific-ISOFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005634nucleus-ISOComponent
GO:0005925focal adhesion-ISOComponent
GO:0006913nucleocytoplasmic transport-ISOProcess
GO:0017124SH3 domain binding-ISOFunction
GO:0043565sequence-specific DNA binding-ISOFunction
GO:0045944positive regulation of transcription by RNA polymerase II-ISOProcess
GO:0050714positive regulation of protein secretion-ISOProcess

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