EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000038352 (Gene tree)
Gene ID: 217151
Gene Symbol: Arl5c
Alias: Arl12
Full Name: ADP-ribosylation factor-like 5C
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 6604 bases
Position: chr11:97989578-97996181
Accession: 3028577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000037214	MMR_HSR1	PF01926.23	3e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000107563	-	823	XM_011248941	ENSMUSP00000103188	98 (aa)	XP_011247243	A2A541
ENSMUST00000042971	-	1571	XM_011248939	ENSMUSP00000037214	179 (aa)	XP_011247241	Q6P068

Gene Model

Click here to download ENSMUSG00000038352's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000038352's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000038352	Arl5c	96	42.197	ENSMUSG00000020440	Arf5	96	42.197
ENSMUSG00000038352	Arl5c	99	38.043	ENSMUSG00000022722	Arl6	98	38.043
ENSMUSG00000038352	Arl5c	96	41.040	ENSMUSG00000025035	Arl3	95	41.040
ENSMUSG00000038352	Arl5c	98	72.000	ENSMUSG00000036093	Arl5a	98	72.000
ENSMUSG00000038352	Arl5c	86	36.250	ENSMUSG00000034936	Arl4d	80	36.250
ENSMUSG00000038352	Arl5c	98	74.286	ENSMUSG00000017418	Arl5b	97	74.286
ENSMUSG00000038352	Arl5c	89	45.283	ENSMUSG00000060904	Arl1	99	48.175
ENSMUSG00000038352	Arl5c	88	41.772	ENSMUSG00000024944	Arl2	86	41.772
ENSMUSG00000038352	Arl5c	63	30.000	ENSMUSG00000047187	Rab2a	55	30.000
ENSMUSG00000038352	Arl5c	63	30.702	ENSMUSG00000025870	Arl10	55	30.702
ENSMUSG00000038352	Arl5c	87	39.103	ENSMUSG00000043157	Arl11	89	39.103
ENSMUSG00000038352	Arl5c	84	41.509	ENSMUSG00000049866	Arl4c	82	41.509
ENSMUSG00000038352	Arl5c	69	31.250	ENSMUSG00000023460	Rab12	51	31.250
ENSMUSG00000038352	Arl5c	87	39.506	ENSMUSG00000047446	Arl4a	81	39.506
ENSMUSG00000038352	Arl5c	96	37.705	ENSMUSG00000038671	Arfrp1	93	40.708
ENSMUSG00000038352	Arl5c	98	44.318	ENSMUSG00000062421	Arf2	97	44.318
ENSMUSG00000038352	Arl5c	59	31.429	ENSMUSG00000020088	Sar1a	94	32.584
ENSMUSG00000038352	Arl5c	98	43.750	ENSMUSG00000051853	Arf3	97	43.750
ENSMUSG00000038352	Arl5c	63	30.000	ENSMUSG00000020732	Rab37	55	30.000
ENSMUSG00000038352	Arl5c	88	37.500	ENSMUSG00000098207	Arl14	83	37.500
ENSMUSG00000038352	Arl5c	98	44.886	ENSMUSG00000048076	Arf1	97	44.886

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000038352	Arl5c	100	84.358	ENSAMEG00000004195	ARL5C	99	84.358	Ailuropoda_melanoleuca
ENSMUSG00000038352	Arl5c	99	80.899	ENSACAG00000003879	-	99	80.899	Anolis_carolinensis
ENSMUSG00000038352	Arl5c	100	88.268	ENSCAFG00000016525	ARL5C	100	88.268	Canis_familiaris
ENSMUSG00000038352	Arl5c	100	87.709	ENSCHIG00000008208	ARL5C	100	87.709	Capra_hircus
ENSMUSG00000038352	Arl5c	59	86.792	ENSCHOG00000013232	-	100	86.792	Choloepus_hoffmanni
ENSMUSG00000038352	Arl5c	99	87.571	ENSCGRG00001000695	Arl5c	99	87.571	Cricetulus_griseus_chok1gshd
ENSMUSG00000038352	Arl5c	99	88.136	ENSCGRG00000007376	Arl5c	99	88.136	Cricetulus_griseus_crigri
ENSMUSG00000038352	Arl5c	100	88.827	ENSDNOG00000019741	ARL5C	100	88.827	Dasypus_novemcinctus
ENSMUSG00000038352	Arl5c	100	86.592	ENSDORG00000016304	Arl5c	100	86.592	Dipodomys_ordii
ENSMUSG00000038352	Arl5c	93	87.349	ENSEASG00005001922	ARL5C	77	87.349	Equus_asinus_asinus
ENSMUSG00000038352	Arl5c	100	88.268	ENSECAG00000009024	ARL5C	100	88.268	Equus_caballus
ENSMUSG00000038352	Arl5c	100	88.268	ENSFCAG00000009962	ARL5C	100	88.268	Felis_catus
ENSMUSG00000038352	Arl5c	100	92.179	ENSSTOG00000011104	ARL5C	100	92.179	Ictidomys_tridecemlineatus
ENSMUSG00000038352	Arl5c	100	78.771	ENSLACG00000015332	ARL5C	100	78.771	Latimeria_chalumnae
ENSMUSG00000038352	Arl5c	100	90.503	ENSLAFG00000018248	ARL5C	99	90.503	Loxodonta_africana
ENSMUSG00000038352	Arl5c	99	83.708	ENSMAUG00000012845	Arl5c	88	83.708	Mesocricetus_auratus
ENSMUSG00000038352	Arl5c	100	88.827	ENSMICG00000002661	ARL5C	100	88.827	Microcebus_murinus
ENSMUSG00000038352	Arl5c	100	84.358	ENSMOCG00000000234	Arl5c	100	84.358	Microtus_ochrogaster
ENSMUSG00000038352	Arl5c	100	98.324	MGP_CAROLIEiJ_G0017071	Arl5c	100	98.324	Mus_caroli
ENSMUSG00000038352	Arl5c	100	96.648	MGP_PahariEiJ_G0018200	Arl5c	100	96.648	Mus_pahari
ENSMUSG00000038352	Arl5c	100	98.883	MGP_SPRETEiJ_G0017917	Arl5c	100	98.883	Mus_spretus
ENSMUSG00000038352	Arl5c	100	88.268	ENSMLUG00000030149	ARL5C	99	88.268	Myotis_lucifugus
ENSMUSG00000038352	Arl5c	100	86.592	ENSOGAG00000005894	ARL5C	100	86.592	Otolemur_garnettii
ENSMUSG00000038352	Arl5c	100	88.268	ENSOARG00000010377	ARL5C	99	88.268	Ovis_aries
ENSMUSG00000038352	Arl5c	100	88.268	ENSPPRG00000000975	ARL5C	100	88.268	Panthera_pardus
ENSMUSG00000038352	Arl5c	100	87.709	ENSPTIG00000017487	ARL5C	100	87.709	Panthera_tigris_altaica
ENSMUSG00000038352	Arl5c	99	94.915	ENSPEMG00000008932	Arl5c	99	94.915	Peromyscus_maniculatus_bairdii
ENSMUSG00000038352	Arl5c	100	89.944	ENSPCOG00000028489	ARL5C	100	89.944	Propithecus_coquereli
ENSMUSG00000038352	Arl5c	94	88.690	ENSPVAG00000008495	ARL5C	99	88.690	Pteropus_vampyrus
ENSMUSG00000038352	Arl5c	100	93.296	ENSRNOG00000036880	Arl5c	100	93.296	Rattus_norvegicus
ENSMUSG00000038352	Arl5c	98	76.136	ENSSBOG00000021022	ARL5C	100	76.136	Saimiri_boliviensis_boliviensis
ENSMUSG00000038352	Arl5c	96	80.702	ENSSPUG00000007555	ARL5C	100	82.822	Sphenodon_punctatus
ENSMUSG00000038352	Arl5c	100	87.709	ENSTBEG00000007274	ARL5C	100	87.709	Tupaia_belangeri
ENSMUSG00000038352	Arl5c	100	87.151	ENSUAMG00000012299	ARL5C	100	87.151	Ursus_americanus
ENSMUSG00000038352	Arl5c	100	87.709	ENSUMAG00000017197	ARL5C	100	87.709	Ursus_maritimus
ENSMUSG00000038352	Arl5c	100	75.978	ENSXETG00000023713	arl5c	92	75.978	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0005525	GTP binding	21873635.	IBA	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005802	trans-Golgi network	21873635.	IBA	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0016192	vesicle-mediated transport	21873635.	IBA	Process
GO:1903292	protein localization to Golgi membrane	21873635.	IBA	Process