EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000038374 (Gene tree)
Gene ID
60365
Gene Symbol
Rbm8a
Alias
2310057C03Rik|Rbm8
Full Name
RNA binding motif protein 8a
Gene Type
protein_coding
Species
Mus_musculus
Status
putative
Strand
Plus strand
Length
3859 bases
Position
chr3:96629933-96633791
Accession
1913129
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000142699RRM_1PF00076.224.3e-1811
ENSMUSP00000143346RRM_1PF00076.226.7e-1811
ENSMUSP00000044548RRM_1PF00076.227.1e-1811
ENSMUSP00000143190RRM_1PF00076.227.1e-1811
ENSMUSP00000044548RRM_3PF08777.114.8e-0611
ENSMUSP00000143190RRM_3PF08777.114.9e-0611
ENSMUSP00000142699RRM_3PF08777.116.3e-0611
ENSMUSP00000143346RRM_3PF08777.111.1e-0511
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000199022-560--- (aa)--
ENSMUST00000196456-2604-ENSMUSP00000143190174 (aa)-Q9CWZ3
ENSMUST00000200647-2620-ENSMUSP00000142699125 (aa)-A0A0G2JEA9
ENSMUST00000199628-464--- (aa)--
ENSMUST00000048915-2608-ENSMUSP00000044548173 (aa)-Q9CWZ3
ENSMUST00000198027-2757-ENSMUSP00000143346171 (aa)-A0A0G2JFX7
Gene Model
Click here to download ENSMUSG00000038374's gene model file
Pathways
Pathway IDPathway NameSource
mmu03013RNA transportKEGG
mmu03015mRNA surveillance pathwayKEGG
mmu03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000038374's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000038374Rbm8a7030.000ENSMUSG00000029402Snrnp356034.211
ENSMUSG00000038374Rbm8a6530.864ENSMUSG00000031167Rbm35330.864
ENSMUSG00000038374Rbm8a8630.693ENSMUSG00000028546Elavl45433.784
ENSMUSG00000038374Rbm8a7435.870ENSMUSG00000071337Tia17735.870
ENSMUSG00000038374Rbm8a8133.784ENSMUSG00000008489Elavl25933.784
ENSMUSG00000038374Rbm8a6032.000ENSMUSG00000045193Cirbp6932.000
ENSMUSG00000038374Rbm8a7931.313ENSMUSG00000031134Rbmx7332.000
ENSMUSG00000038374Rbm8a10097.701ENSMUSG00000078184Rbm8a210097.701
ENSMUSG00000038374Rbm8a8632.000ENSMUSG00000040028Elavl17432.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000038374Rbm8a100100.000ENSG00000265241RBM8A100100.000Homo_sapiens
ENSMUSG00000038374Rbm8a9985.799ENSAPOG00000009727rbm8a8692.715Acanthochromis_polyacanthus
ENSMUSG00000038374Rbm8a100100.000ENSAMEG00000017623RBM8A10098.305Ailuropoda_melanoleuca
ENSMUSG00000038374Rbm8a10086.550ENSACIG00000017678rbm8a9493.377Amphilophus_citrinellus
ENSMUSG00000038374Rbm8a9985.799ENSAOCG00000023887rbm8a7392.715Amphiprion_ocellaris
ENSMUSG00000038374Rbm8a9985.799ENSAPEG00000022847rbm8a7392.715Amphiprion_percula
ENSMUSG00000038374Rbm8a9985.799ENSATEG00000005630rbm8a8692.715Anabas_testudineus
ENSMUSG00000038374Rbm8a100100.000ENSANAG00000004525RBM8A100100.000Aotus_nancymaae
ENSMUSG00000038374Rbm8a9985.799ENSACLG00000009627rbm8a8692.715Astatotilapia_calliptera
ENSMUSG00000038374Rbm8a9585.890ENSAMXG00000040754rbm8a8792.763Astyanax_mexicanus
ENSMUSG00000038374Rbm8a8963.717WBGene00004387rnp-48760.317Caenorhabditis_elegans
ENSMUSG00000038374Rbm8a100100.000ENSCJAG00000046869RBM8A100100.000Callithrix_jacchus
ENSMUSG00000038374Rbm8a100100.000ENSCAFG00000023172RBM8A100100.000Canis_familiaris
ENSMUSG00000038374Rbm8a100100.000ENSCAFG00020019945RBM8A100100.000Canis_lupus_dingo
ENSMUSG00000038374Rbm8a100100.000ENSCHIG00000012114RBM8A100100.000Capra_hircus
ENSMUSG00000038374Rbm8a100100.000ENSTSYG00000028809RBM8A100100.000Carlito_syrichta
ENSMUSG00000038374Rbm8a10097.600ENSCAPG00000014086RBM8A10097.600Cavia_aperea
ENSMUSG00000038374Rbm8a10098.246ENSCPOG00000022453RBM8A10098.246Cavia_porcellus
ENSMUSG00000038374Rbm8a10099.425ENSCCAG00000022460-10099.425Cebus_capucinus
ENSMUSG00000038374Rbm8a100100.000ENSCCAG00000028589-100100.000Cebus_capucinus
ENSMUSG00000038374Rbm8a100100.000ENSCATG00000021691RBM8A100100.000Cercocebus_atys
ENSMUSG00000038374Rbm8a100100.000ENSCLAG00000000547RBM8A100100.000Chinchilla_lanigera
ENSMUSG00000038374Rbm8a100100.000ENSCSAG00000001779RBM8A100100.000Chlorocebus_sabaeus
ENSMUSG00000038374Rbm8a10099.425ENSCPBG00000007941RBM8A8099.425Chrysemys_picta_bellii
ENSMUSG00000038374Rbm8a9960.000ENSCING00000004877-8965.333Ciona_intestinalis
ENSMUSG00000038374Rbm8a9760.843ENSCSAVG00000005685-8966.887Ciona_savignyi
ENSMUSG00000038374Rbm8a100100.000ENSCANG00000042182RBM8A100100.000Colobus_angolensis_palliatus
ENSMUSG00000038374Rbm8a100100.000ENSCGRG00001002681-100100.000Cricetulus_griseus_chok1gshd
ENSMUSG00000038374Rbm8a9987.903ENSCGRG00001003032-9278.947Cricetulus_griseus_chok1gshd
ENSMUSG00000038374Rbm8a100100.000ENSCGRG00000006832-100100.000Cricetulus_griseus_crigri
ENSMUSG00000038374Rbm8a9985.207ENSCSEG00000011865rbm8a8692.053Cynoglossus_semilaevis
ENSMUSG00000038374Rbm8a9983.432ENSCVAG00000020734rbm8a8690.066Cyprinodon_variegatus
ENSMUSG00000038374Rbm8a9786.747ENSDARG00000016516rbm8a8793.377Danio_rerio
ENSMUSG00000038374Rbm8a5196.875ENSDNOG00000025265-10093.407Dasypus_novemcinctus
ENSMUSG00000038374Rbm8a100100.000ENSDORG00000027340-100100.000Dipodomys_ordii
ENSMUSG00000038374Rbm8a9959.538FBgn0033378tsu9264.935Drosophila_melanogaster
ENSMUSG00000038374Rbm8a10083.333ENSETEG00000017932-10083.333Echinops_telfairi
ENSMUSG00000038374Rbm8a8293.706ENSETEG00000008411-8193.706Echinops_telfairi
ENSMUSG00000038374Rbm8a9876.048ENSEBUG00000010386rbm8a8681.457Eptatretus_burgeri
ENSMUSG00000038374Rbm8a100100.000ENSEASG00005007455RBM8A100100.000Equus_asinus_asinus
ENSMUSG00000038374Rbm8a100100.000ENSECAG00000022024RBM8A100100.000Equus_caballus
ENSMUSG00000038374Rbm8a10073.563ENSEEUG00000008823RBM8A10073.563Erinaceus_europaeus
ENSMUSG00000038374Rbm8a9786.747ENSELUG00000012464rbm8a8692.715Esox_lucius
ENSMUSG00000038374Rbm8a100100.000ENSFCAG00000033936RBM8A100100.000Felis_catus
ENSMUSG00000038374Rbm8a100100.000ENSFDAG00000020821RBM8A100100.000Fukomys_damarensis
ENSMUSG00000038374Rbm8a9984.024ENSFHEG00000013538rbm8a8690.728Fundulus_heteroclitus
ENSMUSG00000038374Rbm8a8790.826ENSGMOG00000007353rbm8a8789.781Gadus_morhua
ENSMUSG00000038374Rbm8a10097.600ENSGALG00000036283RBM8A7797.600Gallus_gallus
ENSMUSG00000038374Rbm8a9984.615ENSGAFG00000021698rbm8a8691.391Gambusia_affinis
ENSMUSG00000038374Rbm8a8789.908ENSGACG00000013157rbm8a8790.511Gasterosteus_aculeatus
ENSMUSG00000038374Rbm8a10099.425ENSGAGG00000023769RBM8A10099.425Gopherus_agassizii
ENSMUSG00000038374Rbm8a100100.000ENSGGOG00000037248RBM8A100100.000Gorilla_gorilla
ENSMUSG00000038374Rbm8a10085.965ENSHBUG00000008827rbm8a9492.715Haplochromis_burtoni
ENSMUSG00000038374Rbm8a100100.000ENSHGLG00000007303RBM8A100100.000Heterocephalus_glaber_female
ENSMUSG00000038374Rbm8a100100.000ENSHGLG00100012468RBM8A100100.000Heterocephalus_glaber_male
ENSMUSG00000038374Rbm8a9883.832ENSHCOG00000010122rbm8a8690.066Hippocampus_comes
ENSMUSG00000038374Rbm8a9785.542ENSIPUG00000006525rbm8a7892.053Ictalurus_punctatus
ENSMUSG00000038374Rbm8a10099.425ENSSTOG00000013917RBM8A10099.425Ictidomys_tridecemlineatus
ENSMUSG00000038374Rbm8a100100.000ENSJJAG00000009488-100100.000Jaculus_jaculus
ENSMUSG00000038374Rbm8a9983.432ENSKMAG00000014454rbm8a8690.066Kryptolebias_marmoratus
ENSMUSG00000038374Rbm8a9985.207ENSLBEG00000015720rbm8a8692.053Labrus_bergylta
ENSMUSG00000038374Rbm8a9789.157ENSLACG00000014365RBM8A8893.506Latimeria_chalumnae
ENSMUSG00000038374Rbm8a9786.747ENSLOCG00000009082rbm8a8793.377Lepisosteus_oculatus
ENSMUSG00000038374Rbm8a10099.425ENSLAFG00000021886-10099.425Loxodonta_africana
ENSMUSG00000038374Rbm8a9970.056ENSLAFG00000011031-8767.949Loxodonta_africana
ENSMUSG00000038374Rbm8a100100.000ENSMFAG00000045376RBM8A100100.000Macaca_fascicularis
ENSMUSG00000038374Rbm8a10096.491ENSMMUG00000016051RBM8A10096.491Macaca_mulatta
ENSMUSG00000038374Rbm8a100100.000ENSMNEG00000040422RBM8A100100.000Macaca_nemestrina
ENSMUSG00000038374Rbm8a100100.000ENSMLEG00000039155RBM8A100100.000Mandrillus_leucophaeus
ENSMUSG00000038374Rbm8a9983.432ENSMAMG00000010565rbm8a8690.066Mastacembelus_armatus
ENSMUSG00000038374Rbm8a9985.799ENSMZEG00005016453rbm8a8692.715Maylandia_zebra
ENSMUSG00000038374Rbm8a100100.000ENSMAUG00000016783-100100.000Mesocricetus_auratus
ENSMUSG00000038374Rbm8a10071.930ENSMICG00000037163-9379.470Microcebus_murinus
ENSMUSG00000038374Rbm8a100100.000ENSMICG00000031698-100100.000Microcebus_murinus
ENSMUSG00000038374Rbm8a100100.000ENSMOCG00000017782-100100.000Microtus_ochrogaster
ENSMUSG00000038374Rbm8a8989.189ENSMMOG00000017179rbm8a8789.051Mola_mola
ENSMUSG00000038374Rbm8a10099.425ENSMODG00000018752RBM8A10099.425Monodelphis_domestica
ENSMUSG00000038374Rbm8a9984.024ENSMALG00000010145rbm8a8690.728Monopterus_albus
ENSMUSG00000038374Rbm8a100100.000MGP_CAROLIEiJ_G0025383Rbm8a100100.000Mus_caroli
ENSMUSG00000038374Rbm8a10096.800MGP_CAROLIEiJ_G0014951Rbm8a210095.977Mus_caroli
ENSMUSG00000038374Rbm8a100100.000MGP_PahariEiJ_G0026828-100100.000Mus_pahari
ENSMUSG00000038374Rbm8a100100.000MGP_SPRETEiJ_G0026330Rbm8a100100.000Mus_spretus
ENSMUSG00000038374Rbm8a100100.000ENSMPUG00000000775RBM8A100100.000Mustela_putorius_furo
ENSMUSG00000038374Rbm8a100100.000ENSMLUG00000017436-100100.000Myotis_lucifugus
ENSMUSG00000038374Rbm8a9582.822ENSMLUG00000022711-8790.066Myotis_lucifugus
ENSMUSG00000038374Rbm8a10099.425ENSNGAG00000016038-10099.425Nannospalax_galili
ENSMUSG00000038374Rbm8a9985.799ENSNBRG00000004541rbm8a8692.715Neolamprologus_brichardi
ENSMUSG00000038374Rbm8a100100.000ENSNLEG00000029632RBM8A100100.000Nomascus_leucogenys
ENSMUSG00000038374Rbm8a10097.600ENSMEUG00000016058RBM8A10097.710Notamacropus_eugenii
ENSMUSG00000038374Rbm8a66100.000ENSOPRG00000013316RBM8A100100.000Ochotona_princeps
ENSMUSG00000038374Rbm8a100100.000ENSODEG00000000114-100100.000Octodon_degus
ENSMUSG00000038374Rbm8a9578.528ENSODEG00000008563-8785.430Octodon_degus
ENSMUSG00000038374Rbm8a10084.800ENSODEG00000002094-8684.211Octodon_degus
ENSMUSG00000038374Rbm8a9985.799ENSONIG00000008608rbm8a8692.715Oreochromis_niloticus
ENSMUSG00000038374Rbm8a100100.000ENSOCUG00000025693RBM8A10098.305Oryctolagus_cuniculus
ENSMUSG00000038374Rbm8a9982.840ENSORLG00000016263rbm8a8689.404Oryzias_latipes
ENSMUSG00000038374Rbm8a10083.041ENSORLG00020012904rbm8a8089.404Oryzias_latipes_hni
ENSMUSG00000038374Rbm8a9982.840ENSORLG00015018824rbm8a8689.404Oryzias_latipes_hsok
ENSMUSG00000038374Rbm8a9983.432ENSOMEG00000021533rbm8a6790.066Oryzias_melastigma
ENSMUSG00000038374Rbm8a100100.000ENSOGAG00000000202RBM8A10098.305Otolemur_garnettii
ENSMUSG00000038374Rbm8a100100.000ENSOARG00000020634RBM8A10099.425Ovis_aries
ENSMUSG00000038374Rbm8a100100.000ENSPPAG00000029116RBM8A100100.000Pan_paniscus
ENSMUSG00000038374Rbm8a100100.000ENSPPRG00000008243RBM8A100100.000Panthera_pardus
ENSMUSG00000038374Rbm8a100100.000ENSPTIG00000009472RBM8A100100.000Panthera_tigris_altaica
ENSMUSG00000038374Rbm8a100100.000ENSPTRG00000001201RBM8A100100.000Pan_troglodytes
ENSMUSG00000038374Rbm8a100100.000ENSPANG00000020584RBM8A100100.000Papio_anubis
ENSMUSG00000038374Rbm8a9885.629ENSPKIG00000009551rbm8a6492.053Paramormyrops_kingsleyae
ENSMUSG00000038374Rbm8a9783.735ENSPKIG00000020558rbm8a8790.066Paramormyrops_kingsleyae
ENSMUSG00000038374Rbm8a9985.799ENSPMGG00000010122rbm8a8692.715Periophthalmus_magnuspinnatus
ENSMUSG00000038374Rbm8a100100.000ENSPEMG00000018117-100100.000Peromyscus_maniculatus_bairdii
ENSMUSG00000038374Rbm8a10099.425ENSPCIG00000011931RBM8A10099.425Phascolarctos_cinereus
ENSMUSG00000038374Rbm8a9985.207ENSPFOG00000010695rbm8a8692.053Poecilia_formosa
ENSMUSG00000038374Rbm8a9985.207ENSPLAG00000009183rbm8a8692.053Poecilia_latipinna
ENSMUSG00000038374Rbm8a9985.207ENSPMEG00000013950rbm8a8692.053Poecilia_mexicana
ENSMUSG00000038374Rbm8a10084.795ENSPREG00000017572rbm8a9491.391Poecilia_reticulata
ENSMUSG00000038374Rbm8a100100.000ENSPPYG00000000929RBM8A100100.000Pongo_abelii
ENSMUSG00000038374Rbm8a10098.851ENSPCAG00000002146-10098.851Procavia_capensis
ENSMUSG00000038374Rbm8a100100.000ENSPCOG00000022886RBM8A100100.000Propithecus_coquereli
ENSMUSG00000038374Rbm8a100100.000ENSPVAG00000014471RBM8A100100.000Pteropus_vampyrus
ENSMUSG00000038374Rbm8a9985.799ENSPNYG00000013564rbm8a8692.715Pundamilia_nyererei
ENSMUSG00000038374Rbm8a9787.349ENSPNAG00000028502rbm8a8794.040Pygocentrus_nattereri
ENSMUSG00000038374Rbm8a100100.000ENSRNOG00000021215Rbm8a100100.000Rattus_norvegicus
ENSMUSG00000038374Rbm8a100100.000ENSRBIG00000039233RBM8A100100.000Rhinopithecus_bieti
ENSMUSG00000038374Rbm8a100100.000ENSRROG00000040324-100100.000Rhinopithecus_roxellana
ENSMUSG00000038374Rbm8a10096.800ENSRROG00000033023-10094.220Rhinopithecus_roxellana
ENSMUSG00000038374Rbm8a100100.000ENSSBOG00000031316RBM8A100100.000Saimiri_boliviensis_boliviensis
ENSMUSG00000038374Rbm8a10099.425ENSSHAG00000018629RBM8A10099.425Sarcophilus_harrisii
ENSMUSG00000038374Rbm8a9784.337ENSSFOG00015024171rbm8a8790.066Scleropages_formosus
ENSMUSG00000038374Rbm8a9786.747ENSSFOG00015009007rbm8a8793.377Scleropages_formosus
ENSMUSG00000038374Rbm8a9984.615ENSSMAG00000012998rbm8a8691.391Scophthalmus_maximus
ENSMUSG00000038374Rbm8a9985.799ENSSDUG00000005911rbm8a8692.715Seriola_dumerili
ENSMUSG00000038374Rbm8a9985.799ENSSLDG00000011664rbm8a8692.715Seriola_lalandi_dorsalis
ENSMUSG00000038374Rbm8a100100.000ENSSARG00000013289RBM8A100100.000Sorex_araneus
ENSMUSG00000038374Rbm8a10098.851ENSSPUG00000001576RBM8A10098.851Sphenodon_punctatus
ENSMUSG00000038374Rbm8a9985.799ENSSPAG00000012181rbm8a8692.715Stegastes_partitus
ENSMUSG00000038374Rbm8a100100.000ENSSSCG00000028509RBM8A100100.000Sus_scrofa
ENSMUSG00000038374Rbm8a9588.344ENSTGUG00000004447RBM8A8795.395Taeniopygia_guttata
ENSMUSG00000038374Rbm8a9982.840ENSTRUG00000013173rbm8a8689.404Takifugu_rubripes
ENSMUSG00000038374Rbm8a9983.432ENSTNIG00000006869rbm8a8690.066Tetraodon_nigroviridis
ENSMUSG00000038374Rbm8a66100.000ENSTBEG00000014947RBM8A100100.000Tupaia_belangeri
ENSMUSG00000038374Rbm8a100100.000ENSTTRG00000009081RBM8A100100.000Tursiops_truncatus
ENSMUSG00000038374Rbm8a100100.000ENSUAMG00000021929RBM8A100100.000Ursus_americanus
ENSMUSG00000038374Rbm8a100100.000ENSUMAG00000010298RBM8A100100.000Ursus_maritimus
ENSMUSG00000038374Rbm8a100100.000ENSVVUG00000007486RBM8A100100.000Vulpes_vulpes
ENSMUSG00000038374Rbm8a9984.615ENSXCOG00000004369rbm8a8691.391Xiphophorus_couchianus
ENSMUSG00000038374Rbm8a10083.626ENSXMAG00000013463rbm8a9490.066Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000184nuclear-transcribed mRNA catabolic process, nonsense-mediated decay21873635.IBAProcess
GO:0000184nuclear-transcribed mRNA catabolic process, nonsense-mediated decay-ISOProcess
GO:0000381regulation of alternative mRNA splicing, via spliceosome21873635.IBAProcess
GO:0000381regulation of alternative mRNA splicing, via spliceosome-ISOProcess
GO:0000398mRNA splicing, via spliceosome-ISOProcess
GO:0003729mRNA binding21873635.IBAFunction
GO:0003729mRNA binding11030346.IDAFunction
GO:0005634nucleus11030346.IDAComponent
GO:0005634nucleus-ISOComponent
GO:0016607nuclear speck-ISOComponent
GO:0030425dendrite-ISOComponent
GO:0035145exon-exon junction complex21873635.IBAComponent
GO:0035145exon-exon junction complex-ISOComponent
GO:0043025neuronal cell body-ISOComponent
GO:0071006U2-type catalytic step 1 spliceosome-ISOComponent
GO:0071013catalytic step 2 spliceosome-ISOComponent

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