EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000038542 (Gene tree)
Gene ID: 234069
Gene Symbol: Pcid2
Alias: A730042J05Rik
Full Name: PCI domain containing 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 28271
Position: chr8: 13077189-13105459
Accession: 2443003
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000166881	-	374	-	-	- (aa)	-	-
ENSMUST00000172443	-	541	-	ENSMUSP00000127622	128 (aa)	-	E9Q1H5
ENSMUST00000167198	-	627	-	ENSMUSP00000130059	23 (aa)	-	F6QZZ3
ENSMUST00000168164	-	2678	-	ENSMUSP00000128207	52 (aa)	-	E9Q5V9
ENSMUST00000165097	-	558	-	-	- (aa)	-	-
ENSMUST00000164416	-	2860	-	ENSMUSP00000133204	399 (aa)	-	Q8BFV2

Gene Model

Click here to download ENSMUSG00000038542's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000038542's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000973	posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery	21873635.	IBA	Process
GO:0003690	double-stranded DNA binding	21873635.	IBA	Function
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0006368	transcription elongation from RNA polymerase II promoter	21873635.	IBA	Process
GO:0016973	poly(A)+ mRNA export from nucleus	21873635.	IBA	Process
GO:0035327	transcriptionally active chromatin	21873635.	IBA	Component
GO:0043066	negative regulation of apoptotic process	20870947.	IMP	Process
GO:0043066	negative regulation of apoptotic process	-	ISO	Process
GO:0043488	regulation of mRNA stability	-	ISO	Process
GO:0044615	nuclear pore nuclear basket	-	ISO	Component
GO:0045579	positive regulation of B cell differentiation	20870947.	IMP	Process
GO:0045893	positive regulation of transcription, DNA-templated	20870947.	IMP	Process
GO:0045893	positive regulation of transcription, DNA-templated	-	ISO	Process
GO:0048536	spleen development	20870947.	IMP	Process
GO:0070390	transcription export complex 2	21873635.	IBA	Component
GO:0070390	transcription export complex 2	-	ISO	Component
GO:0071033	nuclear retention of pre-mRNA at the site of transcription	21873635.	IBA	Process
GO:0090267	positive regulation of mitotic cell cycle spindle assembly checkpoint	20870947.	IMP	Process
GO:0090267	positive regulation of mitotic cell cycle spindle assembly checkpoint	-	ISO	Process
GO:2000117	negative regulation of cysteine-type endopeptidase activity	-	ISO	Process