EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000038628 (Gene tree)
Gene ID: 67005
Gene Symbol: Polr3k
Alias: 12.3kDa|1500004O14Rik|C11|RPC10|RPC11
Full Name: polymerase (RNA) III (DNA directed) polypeptide K
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 6494 bases
Position: chr2:181864337-181870830
Accession: 1914255
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000044582	RNA_POL_M_15KD	PF02150.16	6.3e-08	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000153214	-	474	-	-	- (aa)	-	-
ENSMUST00000039551	-	2948	-	ENSMUSP00000044582	108 (aa)	-	Q9CQZ7

Gene Model

Click here to download ENSMUSG00000038628's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03020	RNA polymerase	KEGG
mmu04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000038628's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000038628	Polr3k	77	32.143	ENSMUSG00000019738	Polr2i	74	32.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000038628	Polr3k	100	99.074	ENSG00000161980	POLR3K	100	99.074	Homo_sapiens
ENSMUSG00000038628	Polr3k	100	92.593	ENSAPOG00000023908	polr3k	100	92.593	Acanthochromis_polyacanthus
ENSMUSG00000038628	Polr3k	100	99.074	ENSAMEG00000006776	POLR3K	100	99.074	Ailuropoda_melanoleuca
ENSMUSG00000038628	Polr3k	100	92.593	ENSACIG00000023296	polr3k	100	92.593	Amphilophus_citrinellus
ENSMUSG00000038628	Polr3k	100	92.593	ENSAOCG00000022121	polr3k	100	92.593	Amphiprion_ocellaris
ENSMUSG00000038628	Polr3k	100	66.225	ENSAPEG00000011600	polr3k	100	66.225	Amphiprion_percula
ENSMUSG00000038628	Polr3k	100	93.519	ENSATEG00000004474	polr3k	100	93.519	Anabas_testudineus
ENSMUSG00000038628	Polr3k	100	100.000	ENSANAG00000024313	POLR3K	100	100.000	Aotus_nancymaae
ENSMUSG00000038628	Polr3k	100	90.741	ENSAMXG00000039818	polr3k	100	90.741	Astyanax_mexicanus
ENSMUSG00000038628	Polr3k	100	99.074	ENSBTAG00000019803	POLR3K	100	99.074	Bos_taurus
ENSMUSG00000038628	Polr3k	100	100.000	ENSCJAG00000011568	POLR3K	100	100.000	Callithrix_jacchus
ENSMUSG00000038628	Polr3k	100	99.074	ENSCAFG00000019715	POLR3K	100	99.074	Canis_familiaris
ENSMUSG00000038628	Polr3k	100	99.074	ENSCAFG00020009353	POLR3K	100	99.074	Canis_lupus_dingo
ENSMUSG00000038628	Polr3k	100	99.074	ENSCPOG00000038538	POLR3K	100	99.074	Cavia_porcellus
ENSMUSG00000038628	Polr3k	100	100.000	ENSCCAG00000036420	POLR3K	100	100.000	Cebus_capucinus
ENSMUSG00000038628	Polr3k	100	100.000	ENSCATG00000044779	POLR3K	100	100.000	Cercocebus_atys
ENSMUSG00000038628	Polr3k	100	99.074	ENSCLAG00000015623	POLR3K	100	99.074	Chinchilla_lanigera
ENSMUSG00000038628	Polr3k	100	100.000	ENSCSAG00000013189	POLR3K	100	100.000	Chlorocebus_sabaeus
ENSMUSG00000038628	Polr3k	100	99.074	ENSCHOG00000011936	POLR3K	100	99.074	Choloepus_hoffmanni
ENSMUSG00000038628	Polr3k	100	89.815	ENSCPBG00000026407	POLR3K	53	89.815	Chrysemys_picta_bellii
ENSMUSG00000038628	Polr3k	100	76.852	ENSCING00000018769	polr3k	100	76.852	Ciona_intestinalis
ENSMUSG00000038628	Polr3k	100	79.630	ENSCSAVG00000008256	-	100	79.630	Ciona_savignyi
ENSMUSG00000038628	Polr3k	100	100.000	ENSCANG00000014572	POLR3K	100	100.000	Colobus_angolensis_palliatus
ENSMUSG00000038628	Polr3k	100	99.074	ENSCGRG00001000491	Polr3k	100	99.074	Cricetulus_griseus_chok1gshd
ENSMUSG00000038628	Polr3k	100	99.074	ENSCGRG00000008002	Polr3k	100	99.074	Cricetulus_griseus_crigri
ENSMUSG00000038628	Polr3k	100	93.519	ENSCSEG00000010369	polr3k	100	93.519	Cynoglossus_semilaevis
ENSMUSG00000038628	Polr3k	100	93.519	ENSCVAG00000015750	polr3k	100	93.519	Cyprinodon_variegatus
ENSMUSG00000038628	Polr3k	100	93.519	ENSDARG00000037835	polr3k	100	93.519	Danio_rerio
ENSMUSG00000038628	Polr3k	100	70.370	FBgn0061362	CG33785	100	70.370	Drosophila_melanogaster
ENSMUSG00000038628	Polr3k	100	99.074	ENSETEG00000009989	POLR3K	100	99.074	Echinops_telfairi
ENSMUSG00000038628	Polr3k	100	83.333	ENSEBUG00000014194	polr3k	100	83.333	Eptatretus_burgeri
ENSMUSG00000038628	Polr3k	100	99.074	ENSEASG00005017858	POLR3K	100	99.074	Equus_asinus_asinus
ENSMUSG00000038628	Polr3k	100	99.074	ENSECAG00000024929	POLR3K	100	99.074	Equus_caballus
ENSMUSG00000038628	Polr3k	100	90.741	ENSELUG00000021625	polr3k	100	90.741	Esox_lucius
ENSMUSG00000038628	Polr3k	100	99.074	ENSFCAG00000038431	POLR3K	100	99.074	Felis_catus
ENSMUSG00000038628	Polr3k	99	87.850	ENSFALG00000004058	POLR3K	96	87.850	Ficedula_albicollis
ENSMUSG00000038628	Polr3k	100	98.148	ENSFDAG00000001608	POLR3K	100	98.148	Fukomys_damarensis
ENSMUSG00000038628	Polr3k	100	93.519	ENSFHEG00000000757	polr3k	100	93.519	Fundulus_heteroclitus
ENSMUSG00000038628	Polr3k	100	87.037	ENSGMOG00000004334	polr3k	100	87.037	Gadus_morhua
ENSMUSG00000038628	Polr3k	100	88.889	ENSGALG00000017681	POLR3K	100	88.889	Gallus_gallus
ENSMUSG00000038628	Polr3k	100	93.519	ENSGAFG00000017933	polr3k	100	93.519	Gambusia_affinis
ENSMUSG00000038628	Polr3k	100	89.815	ENSGACG00000013978	polr3k	100	89.815	Gasterosteus_aculeatus
ENSMUSG00000038628	Polr3k	100	89.815	ENSGAGG00000024229	POLR3K	53	89.815	Gopherus_agassizii
ENSMUSG00000038628	Polr3k	100	100.000	ENSGGOG00000008500	POLR3K	100	100.000	Gorilla_gorilla
ENSMUSG00000038628	Polr3k	100	92.593	ENSHBUG00000000079	polr3k	100	92.593	Haplochromis_burtoni
ENSMUSG00000038628	Polr3k	100	99.074	ENSHGLG00000002434	POLR3K	100	99.074	Heterocephalus_glaber_female
ENSMUSG00000038628	Polr3k	100	99.074	ENSHGLG00100004679	POLR3K	100	99.074	Heterocephalus_glaber_male
ENSMUSG00000038628	Polr3k	100	90.741	ENSHCOG00000007116	polr3k	100	90.741	Hippocampus_comes
ENSMUSG00000038628	Polr3k	100	91.667	ENSIPUG00000011366	polr3k	100	91.667	Ictalurus_punctatus
ENSMUSG00000038628	Polr3k	100	99.074	ENSSTOG00000022940	POLR3K	100	99.074	Ictidomys_tridecemlineatus
ENSMUSG00000038628	Polr3k	100	99.074	ENSJJAG00000022791	Polr3k	100	99.074	Jaculus_jaculus
ENSMUSG00000038628	Polr3k	100	92.593	ENSKMAG00000018692	polr3k	100	92.593	Kryptolebias_marmoratus
ENSMUSG00000038628	Polr3k	100	89.815	ENSLACG00000014660	POLR3K	100	89.815	Latimeria_chalumnae
ENSMUSG00000038628	Polr3k	100	91.667	ENSLOCG00000007584	polr3k	100	91.667	Lepisosteus_oculatus
ENSMUSG00000038628	Polr3k	100	98.148	ENSLAFG00000026907	POLR3K	100	98.148	Loxodonta_africana
ENSMUSG00000038628	Polr3k	100	100.000	ENSMFAG00000041536	POLR3K	100	100.000	Macaca_fascicularis
ENSMUSG00000038628	Polr3k	100	100.000	ENSMMUG00000000586	POLR3K	100	100.000	Macaca_mulatta
ENSMUSG00000038628	Polr3k	100	99.074	ENSMLEG00000040084	POLR3K	100	99.074	Mandrillus_leucophaeus
ENSMUSG00000038628	Polr3k	100	93.519	ENSMAMG00000002908	polr3k	100	93.519	Mastacembelus_armatus
ENSMUSG00000038628	Polr3k	100	92.593	ENSMZEG00005022452	polr3k	100	92.593	Maylandia_zebra
ENSMUSG00000038628	Polr3k	100	99.074	ENSMAUG00000010035	-	100	99.074	Mesocricetus_auratus
ENSMUSG00000038628	Polr3k	100	97.222	ENSMICG00000031366	-	100	97.222	Microcebus_murinus
ENSMUSG00000038628	Polr3k	100	88.889	ENSMICG00000027063	-	100	88.889	Microcebus_murinus
ENSMUSG00000038628	Polr3k	100	99.074	ENSMOCG00000014307	Polr3k	100	99.074	Microtus_ochrogaster
ENSMUSG00000038628	Polr3k	100	92.593	ENSMMOG00000014830	polr3k	100	92.593	Mola_mola
ENSMUSG00000038628	Polr3k	100	93.519	ENSMALG00000020770	polr3k	100	93.519	Monopterus_albus
ENSMUSG00000038628	Polr3k	100	100.000	MGP_CAROLIEiJ_G0024823	Polr3k	100	100.000	Mus_caroli
ENSMUSG00000038628	Polr3k	100	100.000	MGP_PahariEiJ_G0026271	Polr3k	100	100.000	Mus_pahari
ENSMUSG00000038628	Polr3k	100	100.000	MGP_SPRETEiJ_G0025750	Polr3k	100	100.000	Mus_spretus
ENSMUSG00000038628	Polr3k	100	100.000	ENSMLUG00000015593	POLR3K	100	100.000	Myotis_lucifugus
ENSMUSG00000038628	Polr3k	100	99.074	ENSNGAG00000016438	Polr3k	100	99.074	Nannospalax_galili
ENSMUSG00000038628	Polr3k	100	100.000	ENSNLEG00000007943	POLR3K	100	100.000	Nomascus_leucogenys
ENSMUSG00000038628	Polr3k	100	93.519	ENSOPRG00000005506	POLR3K	100	93.519	Ochotona_princeps
ENSMUSG00000038628	Polr3k	100	98.148	ENSODEG00000015558	POLR3K	100	98.148	Octodon_degus
ENSMUSG00000038628	Polr3k	100	92.593	ENSONIG00000001424	polr3k	100	92.593	Oreochromis_niloticus
ENSMUSG00000038628	Polr3k	100	90.741	ENSOCUG00000022824	-	100	90.741	Oryctolagus_cuniculus
ENSMUSG00000038628	Polr3k	100	98.148	ENSOCUG00000013608	POLR3K	100	98.148	Oryctolagus_cuniculus
ENSMUSG00000038628	Polr3k	100	90.741	ENSORLG00000026165	polr3k	100	90.741	Oryzias_latipes
ENSMUSG00000038628	Polr3k	100	91.667	ENSORLG00020005190	polr3k	100	91.667	Oryzias_latipes_hni
ENSMUSG00000038628	Polr3k	100	91.667	ENSORLG00015018330	polr3k	100	91.667	Oryzias_latipes_hsok
ENSMUSG00000038628	Polr3k	100	91.667	ENSOMEG00000023979	polr3k	100	91.667	Oryzias_melastigma
ENSMUSG00000038628	Polr3k	100	99.074	ENSOGAG00000002526	-	100	99.074	Otolemur_garnettii
ENSMUSG00000038628	Polr3k	99	97.196	ENSOARG00000010407	POLR3K	95	97.196	Ovis_aries
ENSMUSG00000038628	Polr3k	100	100.000	ENSPPAG00000038313	POLR3K	100	100.000	Pan_paniscus
ENSMUSG00000038628	Polr3k	100	99.074	ENSPPRG00000014063	POLR3K	100	99.074	Panthera_pardus
ENSMUSG00000038628	Polr3k	100	97.222	ENSPTIG00000013600	POLR3K	100	97.222	Panthera_tigris_altaica
ENSMUSG00000038628	Polr3k	100	100.000	ENSPTRG00000007525	POLR3K	100	100.000	Pan_troglodytes
ENSMUSG00000038628	Polr3k	100	100.000	ENSPANG00000006340	POLR3K	100	100.000	Papio_anubis
ENSMUSG00000038628	Polr3k	100	92.593	ENSPKIG00000020663	polr3k	100	92.593	Paramormyrops_kingsleyae
ENSMUSG00000038628	Polr3k	100	93.519	ENSPMGG00000004235	polr3k	100	93.519	Periophthalmus_magnuspinnatus
ENSMUSG00000038628	Polr3k	100	100.000	ENSPCIG00000026349	POLR3K	100	100.000	Phascolarctos_cinereus
ENSMUSG00000038628	Polr3k	100	94.444	ENSPFOG00000010720	polr3k	100	94.444	Poecilia_formosa
ENSMUSG00000038628	Polr3k	100	94.444	ENSPLAG00000002402	polr3k	100	94.444	Poecilia_latipinna
ENSMUSG00000038628	Polr3k	100	94.444	ENSPMEG00000019096	polr3k	100	94.444	Poecilia_mexicana
ENSMUSG00000038628	Polr3k	100	94.444	ENSPREG00000007842	polr3k	100	94.444	Poecilia_reticulata
ENSMUSG00000038628	Polr3k	100	72.222	ENSPPYG00000006893	-	100	72.222	Pongo_abelii
ENSMUSG00000038628	Polr3k	100	71.296	ENSPCAG00000009454	POLR3K	100	71.296	Procavia_capensis
ENSMUSG00000038628	Polr3k	100	100.000	ENSPCOG00000018678	POLR3K	100	100.000	Propithecus_coquereli
ENSMUSG00000038628	Polr3k	100	100.000	ENSPVAG00000000530	POLR3K	100	100.000	Pteropus_vampyrus
ENSMUSG00000038628	Polr3k	100	92.593	ENSPNYG00000007973	polr3k	100	92.593	Pundamilia_nyererei
ENSMUSG00000038628	Polr3k	100	93.519	ENSPNAG00000012135	polr3k	100	93.519	Pygocentrus_nattereri
ENSMUSG00000038628	Polr3k	100	100.000	ENSRNOG00000017843	Polr3k	100	100.000	Rattus_norvegicus
ENSMUSG00000038628	Polr3k	100	100.000	ENSRBIG00000044310	POLR3K	100	100.000	Rhinopithecus_bieti
ENSMUSG00000038628	Polr3k	100	100.000	ENSRROG00000039773	POLR3K	100	100.000	Rhinopithecus_roxellana
ENSMUSG00000038628	Polr3k	100	52.212	YDR045C	RPC11	99	52.212	Saccharomyces_cerevisiae
ENSMUSG00000038628	Polr3k	100	75.000	ENSSBOG00000013108	POLR3K	100	75.000	Saimiri_boliviensis_boliviensis
ENSMUSG00000038628	Polr3k	100	93.519	ENSSFOG00015014586	polr3k	100	93.519	Scleropages_formosus
ENSMUSG00000038628	Polr3k	100	88.889	ENSSMAG00000005016	polr3k	100	88.889	Scophthalmus_maximus
ENSMUSG00000038628	Polr3k	100	93.519	ENSSDUG00000019184	polr3k	100	93.519	Seriola_dumerili
ENSMUSG00000038628	Polr3k	100	91.667	ENSSLDG00000010911	polr3k	100	91.667	Seriola_lalandi_dorsalis
ENSMUSG00000038628	Polr3k	100	90.741	ENSSPUG00000019095	POLR3K	100	90.741	Sphenodon_punctatus
ENSMUSG00000038628	Polr3k	100	93.519	ENSSPAG00000013884	polr3k	100	93.519	Stegastes_partitus
ENSMUSG00000038628	Polr3k	100	100.000	ENSSSCG00000007970	POLR3K	100	100.000	Sus_scrofa
ENSMUSG00000038628	Polr3k	100	92.593	ENSTRUG00000011844	polr3k	100	92.593	Takifugu_rubripes
ENSMUSG00000038628	Polr3k	100	93.519	ENSTNIG00000018584	polr3k	100	93.519	Tetraodon_nigroviridis
ENSMUSG00000038628	Polr3k	100	99.074	ENSTTRG00000012043	POLR3K	100	99.074	Tursiops_truncatus
ENSMUSG00000038628	Polr3k	100	100.000	ENSUAMG00000013850	POLR3K	100	100.000	Ursus_americanus
ENSMUSG00000038628	Polr3k	100	99.074	ENSVPAG00000003438	POLR3K	100	99.074	Vicugna_pacos
ENSMUSG00000038628	Polr3k	100	89.815	ENSXETG00000001142	polr3k	100	89.815	Xenopus_tropicalis
ENSMUSG00000038628	Polr3k	100	94.444	ENSXCOG00000011122	polr3k	100	94.444	Xiphophorus_couchianus
ENSMUSG00000038628	Polr3k	100	94.444	ENSXMAG00000025654	polr3k	100	94.444	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001056	RNA polymerase III activity	21873635.	IBA	Function
GO:0002376	immune system process	-	IEA	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	21873635.	IBA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005666	RNA polymerase III complex	21873635.	IBA	Component
GO:0006351	transcription, DNA-templated	-	IEA	Process
GO:0006386	termination of RNA polymerase III transcription	21873635.	IBA	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0042779	tRNA 3'-trailer cleavage	-	IEA	Process
GO:0045087	innate immune response	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0051607	defense response to virus	-	IEA	Process