EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000038683 (Gene tree)
Gene ID: 68083
Gene Symbol: Pak1ip1
Alias: 5830431I15Rik|5930415H02Rik|Gdpd1|PIP1|p21-activated protein kinase-interacting protein 1
Full Name: PAK1 interacting protein 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 11993
Position: chr13: 41001023-41013015
Accession: 1915333
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000174472	-	1757	-	-	- (aa)	-	-
ENSMUST00000046951	-	1722	-	ENSMUSP00000040846	382 (aa)	-	Q9DCE5
ENSMUST00000174527	-	331	-	-	- (aa)	-	-
ENSMUST00000174551	-	3136	-	-	- (aa)	-	-
ENSMUST00000173238	-	1155	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000038683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000038683's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000038683	Pak1ip1	98	72.632	ENSG00000111845	PAK1IP1	98	73.057	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005515	protein binding	23935987.	IPI	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005730	nucleolus	23935987.	IDA	Component
GO:0008283	cell proliferation	23935987.	IPI	Process
GO:0009968	negative regulation of signal transduction	-	IEA	Process
GO:0042254	ribosome biogenesis	-	IEA	Process
GO:0042273	ribosomal large subunit biogenesis	-	ISO	Process
GO:0060021	roof of mouth development	23935987.	IMP	Process
GO:1901796	regulation of signal transduction by p53 class mediator	-	ISO	Process