EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000038685 (Gene tree)
Gene ID: 269400
Gene Symbol: Rtel1
Alias: -
Full Name: regulator of telomere elongation helicase 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 36878 bases
Position: chr2:181319739-181356616
Accession: 2139369
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000118810	ResIII	PF04851.15	4.7e-05	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000054622	-	4401	XM_006500633	ENSMUSP00000053120	1209 (aa)	XP_006500696	Q0VGM9
ENSMUST00000126842	-	485	-	-	- (aa)	-	-
ENSMUST00000130772	-	1594	-	-	- (aa)	-	-
ENSMUST00000153112	-	719	-	ENSMUSP00000118810	162 (aa)	-	A2AU08
ENSMUST00000124149	-	712	-	-	- (aa)	-	-
ENSMUST00000148252	-	3505	XM_006500643	ENSMUSP00000116159	992 (aa)	XP_006500706	Z4YLW7
ENSMUST00000125233	-	409	-	-	- (aa)	-	-
ENSMUST00000139601	-	606	-	-	- (aa)	-	-
ENSMUST00000139608	-	4448	-	-	- (aa)	-	-
ENSMUST00000108814	-	4322	XM_006500637	ENSMUSP00000104442	1203 (aa)	XP_006500700	Q0VGM9
ENSMUST00000137700	-	482	-	ENSMUSP00000121400	101 (aa)	-	F6RDU0
ENSMUST00000146273	-	1966	-	-	- (aa)	-	-
ENSMUST00000147266	-	459	-	-	- (aa)	-	-
ENSMUST00000108815	-	4243	XM_006500640	ENSMUSP00000104443	1164 (aa)	XP_006500703	Q0VGM9
ENSMUST00000144648	-	597	-	-	- (aa)	-	-
ENSMUST00000133856	-	442	-	ENSMUSP00000120162	88 (aa)	-	F6X1P9
ENSMUST00000048608	-	4135	-	ENSMUSP00000043563	1128 (aa)	-	Q0VGM9
ENSMUST00000130935	-	825	-	-	- (aa)	-	-
ENSMUST00000098971	-	4307	XM_006500639	ENSMUSP00000096571	1170 (aa)	XP_006500702	Q0VGM9
ENSMUST00000134651	-	470	-	ENSMUSP00000123039	97 (aa)	-	F6UWJ0
ENSMUST00000184751	-	614	-	ENSMUSP00000138971	52 (aa)	-	V9GX41

Gene Model

Click here to download ENSMUSG00000038685's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000038685's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000038685	Rtel1	100	85.802	ENSG00000258366	RTEL1	97	82.558	Homo_sapiens
ENSMUSG00000038685	Rtel1	100	99.383	MGP_CAROLIEiJ_G0024804	Rtel1	100	99.383	Mus_caroli
ENSMUSG00000038685	Rtel1	100	96.914	MGP_PahariEiJ_G0026252	Rtel1	100	96.914	Mus_pahari
ENSMUSG00000038685	Rtel1	100	100.000	MGP_SPRETEiJ_G0025730	Rtel1	100	100.000	Mus_spretus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000723	telomere maintenance	15210109.	IMP	Process
GO:0000723	telomere maintenance	-	ISO	Process
GO:0000732	strand displacement	22579284.	IDA	Process
GO:0000781	chromosome, telomeric region	22579284.	IDA	Component
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0004003	ATP-dependent DNA helicase activity	21873635.	IBA	Function
GO:0004003	ATP-dependent DNA helicase activity	24115439.	IDA	Function
GO:0004003	ATP-dependent DNA helicase activity	-	ISO	Function
GO:0004386	helicase activity	22579284.	TAS	Function
GO:0005515	protein binding	24115439.	IPI	Function
GO:0005524	ATP binding	21873635.	IBA	Function
GO:0005524	ATP binding	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	15210109.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0006139	nucleobase-containing compound metabolic process	-	IEA	Process
GO:0006260	DNA replication	-	IEA	Process
GO:0006281	DNA repair	-	IEA	Process
GO:0006310	DNA recombination	-	IEA	Process
GO:0006974	cellular response to DNA damage stimulus	-	IEA	Process
GO:0008026	ATP-dependent helicase activity	-	IEA	Function
GO:0010569	regulation of double-strand break repair via homologous recombination	21873635.	IBA	Process
GO:0010569	regulation of double-strand break repair via homologous recombination	-	ISO	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	-	IEA	Function
GO:0031297	replication fork processing	24115439.	IDA	Process
GO:0032206	positive regulation of telomere maintenance	22579284.	IMP	Process
GO:0032508	DNA duplex unwinding	21873635.	IBA	Process
GO:0032508	DNA duplex unwinding	24115439.	IDA	Process
GO:0043247	telomere maintenance in response to DNA damage	22579284.	IMP	Process
GO:0045910	negative regulation of DNA recombination	21873635.	IBA	Process
GO:0045910	negative regulation of DNA recombination	22579284.	IDA	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0051536	iron-sulfur cluster binding	-	IEA	Function
GO:0051539	4 iron, 4 sulfur cluster binding	-	IEA	Function
GO:0061820	telomeric D-loop disassembly	22579284.	TAS	Process
GO:0070182	DNA polymerase binding	21873635.	IBA	Function
GO:0070182	DNA polymerase binding	24115439.	IPI	Function
GO:0090657	telomeric loop disassembly	21873635.	IBA	Process
GO:0090657	telomeric loop disassembly	22579284.	IDA	Process
GO:0090657	telomeric loop disassembly	24115439.	IMP	Process
GO:0090657	telomeric loop disassembly	-	ISO	Process
GO:1902990	mitotic telomere maintenance via semi-conservative replication	24115439.	IDA	Process
GO:1904355	positive regulation of telomere capping	-	ISO	Process
GO:1904358	positive regulation of telomere maintenance via telomere lengthening	-	ISO	Process
GO:1904430	negative regulation of t-circle formation	21873635.	IBA	Process
GO:1904430	negative regulation of t-circle formation	22579284.24115439.	IMP	Process
GO:1904430	negative regulation of t-circle formation	-	ISO	Process
GO:1904506	negative regulation of telomere maintenance in response to DNA damage	22579284.	IMP	Process
GO:1904535	positive regulation of telomeric loop disassembly	22579284.	IDA	Process