EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000038759 (Gene tree)
Gene ID: 70699
Gene Symbol: Nup205
Alias: 3830404O05Rik
Full Name: nucleoporin 205
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 70176
Position: chr6: 35177421-35247596
Accession: 2141625
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000170234	-	1120	-	ENSMUSP00000130033	322 (aa)	-	E9Q880
ENSMUST00000201842	-	2752	-	-	- (aa)	-	-
ENSMUST00000202898	-	2409	-	-	- (aa)	-	-
ENSMUST00000043815	-	6412	XM_006506590	ENSMUSP00000039656	2008 (aa)	XP_006506653	B9EJ54
ENSMUST00000201374	-	6411	-	ENSMUSP00000144126	2061 (aa)	-	A0A0J9YUD5
ENSMUST00000201609	-	4508	-	-	- (aa)	-	-
ENSMUST00000200739	-	1299	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000038759's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000038759's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000038759	Nup205	100	93.244	ENSG00000155561	NUP205	100	93.244	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005643	nuclear pore	-	ISO	Component
GO:0006999	nuclear pore organization	21873635.	IBA	Process
GO:0017056	structural constituent of nuclear pore	21873635.	IBA	Function
GO:0017056	structural constituent of nuclear pore	-	ISO	Function
GO:0031965	nuclear membrane	-	ISO	Component
GO:0034399	nuclear periphery	-	ISO	Component
GO:0044611	nuclear pore inner ring	21873635.	IBA	Component
GO:0051292	nuclear pore complex assembly	-	ISO	Process