EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000038806 (Gene tree)
Gene ID: 208768
Gene Symbol: Sde2
Alias: BC031781
Full Name: SDE2 telomere maintenance homolog (S. pombe)
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 16987
Position: chr1: 180851127-180868113
Accession: 2384788
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000194948	-	924	-	-	- (aa)	-	-
ENSMUST00000038091	-	3213	-	ENSMUSP00000037890	448 (aa)	-	Q8K1J5

Gene Model

Click here to download ENSMUSG00000038806's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000038806's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000038806	Sde2	100	65.944	ENSG00000143751	SDE2	100	66.161	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0003684	damaged DNA binding	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0006260	DNA replication	-	IEA	Process
GO:0007049	cell cycle	-	IEA	Process
GO:0016485	protein processing	-	ISO	Process
GO:0016567	protein ubiquitination	-	ISO	Process
GO:0034644	cellular response to UV	-	ISO	Process
GO:0051301	cell division	-	IEA	Process
GO:0071156	regulation of cell cycle arrest	-	ISO	Process