EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000038965 (Gene tree)
Gene ID: 22195
Gene Symbol: Ube2l3
Alias: UbcM4|Ubce7
Full Name: ubiquitin-conjugating enzyme E2L 3
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 50637
Position: chr16: 17152013-17202649
Accession: 109240
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000231557	-	298	-	-	- (aa)	-	-
ENSMUST00000232035	-	3015	-	ENSMUSP00000156034	114 (aa)	-	UPI000DE7D67D
ENSMUST00000232668	-	1025	-	ENSMUSP00000156283	146 (aa)	-	UPI000DE7E19D
ENSMUST00000232514	-	458	-	ENSMUSP00000156193	26 (aa)	-	UPI000DE7C275
ENSMUST00000231643	-	650	XM_006522004	ENSMUSP00000156336	122 (aa)	XP_006522067	UPI00001EA470
ENSMUST00000090192	-	2609	-	ENSMUSP00000087658	154 (aa)	-	P68037
ENSMUST00000232594	-	454	-	ENSMUSP00000156000	32 (aa)	-	UPI000DE7CD44
ENSMUST00000232139	-	2906	-	ENSMUSP00000156121	154 (aa)	-	Q561N4

Gene Model

Click here to download ENSMUSG00000038965's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04120	Ubiquitin mediated proteolysis	KEGG
mmu05012	Parkinson disease	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000038965's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000038965	Ube2l3	100	100.000	ENSG00000185651	UBE2L3	100	100.000	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000151	ubiquitin ligase complex	21873635.	IBA	Component
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000209	protein polyubiquitination	-	ISO	Process
GO:0003713	transcription coactivator activity	-	ISO	Function
GO:0004842	ubiquitin-protein transferase activity	-	ISO	Function
GO:0005515	protein binding	11274149.	IPI	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0006355	regulation of transcription, DNA-templated	-	ISO	Process
GO:0006511	ubiquitin-dependent protein catabolic process	21873635.	IBA	Process
GO:0006511	ubiquitin-dependent protein catabolic process	23499007.	IMP	Process
GO:0008283	cell proliferation	-	ISO	Process
GO:0016567	protein ubiquitination	-	ISO	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0031398	positive regulation of protein ubiquitination	-	ISO	Process
GO:0031625	ubiquitin protein ligase binding	21873635.	IBA	Function
GO:0031625	ubiquitin protein ligase binding	-	ISO	Function
GO:0044770	cell cycle phase transition	-	ISO	Process
GO:0051443	positive regulation of ubiquitin-protein transferase activity	-	ISO	Process
GO:0061631	ubiquitin conjugating enzyme activity	21873635.	IBA	Function
GO:0061631	ubiquitin conjugating enzyme activity	10501966.23499007.	IDA	Function
GO:0061631	ubiquitin conjugating enzyme activity	-	ISO	Function
GO:0070979	protein K11-linked ubiquitination	21873635.	IBA	Process
GO:0070979	protein K11-linked ubiquitination	-	ISO	Process
GO:0071383	cellular response to steroid hormone stimulus	-	ISO	Process
GO:0071385	cellular response to glucocorticoid stimulus	-	ISO	Process
GO:0097027	ubiquitin-protein transferase activator activity	-	ISO	Function