EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000039087 (Gene tree)
Gene ID: 68750
Gene Symbol: Rreb1
Alias: 1110037N09Rik|B930013M22Rik
Full Name: ras responsive element binding protein 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 173606
Position: chr13: 37778400-37952005
Accession: 2443664
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000138043	-	342	-	ENSMUSP00000124745	4 (aa)	-	UPI0001DD365F
ENSMUST00000124268	-	9702	NR_033218	-	- (aa)	-	-
ENSMUST00000110238	-	7437	-	ENSMUSP00000105867	1291 (aa)	-	Q3UH06
ENSMUST00000128570	-	8436	XM_006516749	ENSMUSP00000115599	1754 (aa)	XP_006516812	Q3UH06
ENSMUST00000110237	-	4617	-	ENSMUSP00000105866	1291 (aa)	-	Q3UH06
ENSMUST00000162849	-	1053	-	ENSMUSP00000124802	320 (aa)	-	F6UB40
ENSMUST00000124373	-	2376	-	ENSMUSP00000118420	67 (aa)	-	Q3UHQ4
ENSMUST00000122842	-	445	-	ENSMUSP00000117048	12 (aa)	-	B8JJE5
ENSMUST00000037232	-	8395	XM_006516750	ENSMUSP00000049265	1754 (aa)	XP_006516813	Q3UH06
ENSMUST00000149745	-	4320	-	ENSMUSP00000121211	1291 (aa)	-	Q3UH06
ENSMUST00000138110	-	512	-	ENSMUSP00000116557	33 (aa)	-	B8JJE4

Gene Model

Click here to download ENSMUSG00000039087's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000039087's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0000122	negative regulation of transcription by RNA polymerase II	20133935.	IMP	Process
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding	21873635.	IBA	Function
GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding	-	ISO	Function
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	21873635.	IBA	Function
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	-	ISO	Function
GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	21873635.	IBA	Function
GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	-	ISO	Function
GO:0001650	fibrillar center	-	ISO	Component
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003700	DNA-binding transcription factor activity	21873635.	IBA	Function
GO:0003700	DNA-binding transcription factor activity	21159816.	IDA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0010634	positive regulation of epithelial cell migration	-	ISO	Process
GO:0016607	nuclear speck	-	ISO	Component
GO:0033601	positive regulation of mammary gland epithelial cell proliferation	-	ISO	Process
GO:0045892	negative regulation of transcription, DNA-templated	21159816.	IDA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:1900026	positive regulation of substrate adhesion-dependent cell spreading	-	ISO	Process
GO:1903691	positive regulation of wound healing, spreading of epidermal cells	-	ISO	Process
GO:2000394	positive regulation of lamellipodium morphogenesis	-	ISO	Process