EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000039108 (Gene tree)
Gene ID
241846
Gene Symbol
Lsm14b
Alias
-
Full Name
LSM family member 14B
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Plus strand
Length
10479 bases
Position
chr2:180024987-180035465
Accession
3040677
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000055036FDFPF09532.102e-2511
ENSMUSP00000062519FDFPF09532.103.1e-2511
ENSMUSP00000055036SM-ATXPF14438.61.3e-0711
ENSMUSP00000055036LSM14PF12701.71.7e-3011
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27281784Identification of RNA binding Proteins in Macrophages by Interactome CaptureIC & RAW264.72016 Jun 8Liepelt ADOI: 10.1074/mcp.M115.056564
23912277The RNA binding protein repertoire of embryonic stem cellsIC & mESC2013 Aug 4Kwon SCDOI: 10.1038/nsmb.2638
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseIC & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000055485-2534XM_006500617ENSMUSP00000055036385 (aa)XP_006500680Q8CGC4
ENSMUST00000140257-733--- (aa)--
ENSMUST00000058764-2566-ENSMUSP00000062519305 (aa)-Q8BM41
Gene Model
Click here to download ENSMUSG00000039108's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000039108's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000039108Lsm14b9547.357ENSMUSG00000066568Lsm14a9455.088
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000039108Lsm14b10094.545ENSG00000149657LSM14B10094.545Homo_sapiens
ENSMUSG00000039108Lsm14b9056.267ENSAPOG00000001780lsm14b9256.593Acanthochromis_polyacanthus
ENSMUSG00000039108Lsm14b10090.492ENSAMEG00000013430LSM14B10082.742Ailuropoda_melanoleuca
ENSMUSG00000039108Lsm14b9054.391ENSACIG00000012266lsm14b9154.076Amphilophus_citrinellus
ENSMUSG00000039108Lsm14b6242.083ENSACIG00000003147LSM14B8843.038Amphilophus_citrinellus
ENSMUSG00000039108Lsm14b9849.100ENSAOCG00000006667LSM14B9050.140Amphiprion_ocellaris
ENSMUSG00000039108Lsm14b9055.710ENSAOCG00000012380lsm14b9256.044Amphiprion_ocellaris
ENSMUSG00000039108Lsm14b9049.733ENSAPEG00000023633lsm14b9251.639Amphiprion_percula
ENSMUSG00000039108Lsm14b9053.501ENSATEG00000016603lsm14b9254.039Anabas_testudineus
ENSMUSG00000039108Lsm14b9741.196ENSATEG00000015895LSM14B8942.857Anabas_testudineus
ENSMUSG00000039108Lsm14b10082.085ENSAPLG00000013203LSM14B10075.255Anas_platyrhynchos
ENSMUSG00000039108Lsm14b9981.818ENSACAG00000016195LSM14B9981.818Anolis_carolinensis
ENSMUSG00000039108Lsm14b10093.506ENSANAG00000037915LSM14B10093.506Aotus_nancymaae
ENSMUSG00000039108Lsm14b5347.590ENSACLG00000011955-7737.607Astatotilapia_calliptera
ENSMUSG00000039108Lsm14b5350.000ENSACLG00000019624-7839.316Astatotilapia_calliptera
ENSMUSG00000039108Lsm14b8950.811ENSACLG00000019663lsm14b9254.396Astatotilapia_calliptera
ENSMUSG00000039108Lsm14b9960.902ENSAMXG00000002865lsm14b9960.902Astyanax_mexicanus
ENSMUSG00000039108Lsm14b10086.885ENSBTAG00000021558LSM14B10081.368Bos_taurus
ENSMUSG00000039108Lsm14b10093.766ENSCJAG00000014434LSM14B10093.766Callithrix_jacchus
ENSMUSG00000039108Lsm14b10089.508ENSCAFG00000012518LSM14B9881.510Canis_familiaris
ENSMUSG00000039108Lsm14b10091.948ENSCAFG00020022150LSM14B10091.948Canis_lupus_dingo
ENSMUSG00000039108Lsm14b10091.169ENSCHIG00000010284-10091.169Capra_hircus
ENSMUSG00000039108Lsm14b9967.368ENSCHIG00000022681-10067.105Capra_hircus
ENSMUSG00000039108Lsm14b8993.275ENSTSYG00000031914LSM14B8993.275Carlito_syrichta
ENSMUSG00000039108Lsm14b10091.803ENSCAPG00000013059LSM14B10093.003Cavia_aperea
ENSMUSG00000039108Lsm14b10092.131ENSCPOG00000038080LSM14B10093.275Cavia_porcellus
ENSMUSG00000039108Lsm14b9977.273ENSCCAG00000024900-9977.273Cebus_capucinus
ENSMUSG00000039108Lsm14b10093.766ENSCCAG00000021267LSM14B10093.766Cebus_capucinus
ENSMUSG00000039108Lsm14b10094.286ENSCATG00000036006LSM14B10094.286Cercocebus_atys
ENSMUSG00000039108Lsm14b10091.803ENSCLAG00000003186LSM14B10092.982Chinchilla_lanigera
ENSMUSG00000039108Lsm14b10092.131ENSCSAG00000015729LSM14B10085.849Chlorocebus_sabaeus
ENSMUSG00000039108Lsm14b9963.576ENSCHOG00000006997-10065.894Choloepus_hoffmanni
ENSMUSG00000039108Lsm14b10081.759ENSCPBG00000027065LSM14B9977.778Chrysemys_picta_bellii
ENSMUSG00000039108Lsm14b8993.275ENSCANG00000036986LSM14B10093.275Colobus_angolensis_palliatus
ENSMUSG00000039108Lsm14b10097.922ENSCGRG00001018399Lsm14b10097.922Cricetulus_griseus_chok1gshd
ENSMUSG00000039108Lsm14b8086.420ENSCGRG00000002484-10086.420Cricetulus_griseus_crigri
ENSMUSG00000039108Lsm14b9896.980ENSCGRG00000006111-10096.980Cricetulus_griseus_crigri
ENSMUSG00000039108Lsm14b9151.351ENSCSEG00000004722lsm14b9351.862Cynoglossus_semilaevis
ENSMUSG00000039108Lsm14b9547.927ENSCSEG00000020669LSM14B9247.733Cynoglossus_semilaevis
ENSMUSG00000039108Lsm14b9532.313ENSCVAG00000012433-8836.820Cyprinodon_variegatus
ENSMUSG00000039108Lsm14b9955.867ENSDARG00000025386lsm14b9954.962Danio_rerio
ENSMUSG00000039108Lsm14b10086.885ENSDNOG00000025246LSM14B10086.885Dasypus_novemcinctus
ENSMUSG00000039108Lsm14b10091.148ENSDORG00000016683Lsm14b10091.148Dipodomys_ordii
ENSMUSG00000039108Lsm14b9973.506ENSETEG00000001869-10071.688Echinops_telfairi
ENSMUSG00000039108Lsm14b8169.355ENSETEG00000011188-10083.117Echinops_telfairi
ENSMUSG00000039108Lsm14b10090.164ENSEASG00005023218LSM14B10090.164Equus_asinus_asinus
ENSMUSG00000039108Lsm14b10092.468ENSECAG00000010659LSM14B10092.468Equus_caballus
ENSMUSG00000039108Lsm14b7473.684ENSEEUG00000007331LSM14B10073.684Erinaceus_europaeus
ENSMUSG00000039108Lsm14b9659.151ENSELUG00000005780lsm14b9259.944Esox_lucius
ENSMUSG00000039108Lsm14b9053.571ENSELUG00000016299LSM14B9954.020Esox_lucius
ENSMUSG00000039108Lsm14b10092.468ENSFCAG00000003248LSM14B10092.468Felis_catus
ENSMUSG00000039108Lsm14b10083.117ENSFALG00000010618LSM14B10076.744Ficedula_albicollis
ENSMUSG00000039108Lsm14b10092.131ENSFDAG00000002214LSM14B10093.275Fukomys_damarensis
ENSMUSG00000039108Lsm14b7241.935ENSFHEG00000003362LSM14B8145.152Fundulus_heteroclitus
ENSMUSG00000039108Lsm14b10051.010ENSFHEG00000006237lsm14b10050.123Fundulus_heteroclitus
ENSMUSG00000039108Lsm14b10052.713ENSGMOG00000017115lsm14b9951.163Gadus_morhua
ENSMUSG00000039108Lsm14b9985.052ENSGALG00000005125LSM14B9986.082Gallus_gallus
ENSMUSG00000039108Lsm14b9636.177ENSGAFG00000013723LSM14B8741.026Gambusia_affinis
ENSMUSG00000039108Lsm14b9048.476ENSGAFG00000020318lsm14b9248.907Gambusia_affinis
ENSMUSG00000039108Lsm14b9153.591ENSGACG00000009973lsm14b9254.213Gasterosteus_aculeatus
ENSMUSG00000039108Lsm14b9371.127ENSGAGG00000004106LSM14B9480.000Gopherus_agassizii
ENSMUSG00000039108Lsm14b10092.131ENSGGOG00000005630LSM14B10092.131Gorilla_gorilla
ENSMUSG00000039108Lsm14b10093.766ENSHGLG00000015055LSM14B10093.766Heterocephalus_glaber_female
ENSMUSG00000039108Lsm14b9991.722ENSHGLG00100015273LSM14B10091.722Heterocephalus_glaber_male
ENSMUSG00000039108Lsm14b8839.033ENSHCOG00000004867lsm14b8644.681Hippocampus_comes
ENSMUSG00000039108Lsm14b9551.330ENSHCOG00000018747LSM14B9250.975Hippocampus_comes
ENSMUSG00000039108Lsm14b9060.340ENSIPUG00000014946lsm14b9560.000Ictalurus_punctatus
ENSMUSG00000039108Lsm14b10093.770ENSSTOG00000020482LSM14B10094.737Ictidomys_tridecemlineatus
ENSMUSG00000039108Lsm14b9995.789ENSJJAG00000012728Lsm14b9995.789Jaculus_jaculus
ENSMUSG00000039108Lsm14b9053.168ENSKMAG00000017524lsm14b9353.533Kryptolebias_marmoratus
ENSMUSG00000039108Lsm14b6544.811ENSKMAG00000012834-8845.498Kryptolebias_marmoratus
ENSMUSG00000039108Lsm14b6938.346ENSLBEG00000007951LSM14B8641.841Labrus_bergylta
ENSMUSG00000039108Lsm14b10066.667ENSLACG00000003849LSM14B9967.529Latimeria_chalumnae
ENSMUSG00000039108Lsm14b9963.427ENSLOCG00000003746lsm14b9963.427Lepisosteus_oculatus
ENSMUSG00000039108Lsm14b9087.861ENSLAFG00000007492LSM14B10087.861Loxodonta_africana
ENSMUSG00000039108Lsm14b10094.805ENSMFAG00000041479LSM14B10094.805Macaca_fascicularis
ENSMUSG00000039108Lsm14b10094.805ENSMMUG00000014084LSM14B10094.805Macaca_mulatta
ENSMUSG00000039108Lsm14b10094.805ENSMNEG00000045573LSM14B10094.805Macaca_nemestrina
ENSMUSG00000039108Lsm14b8993.567ENSMLEG00000040895LSM14B10093.567Mandrillus_leucophaeus
ENSMUSG00000039108Lsm14b9950.000ENSMAMG00000024124LSM14B9151.117Mastacembelus_armatus
ENSMUSG00000039108Lsm14b9053.760ENSMAMG00000020539lsm14b9254.121Mastacembelus_armatus
ENSMUSG00000039108Lsm14b9146.842ENSMZEG00005026001LSM14B9448.767Maylandia_zebra
ENSMUSG00000039108Lsm14b8950.270ENSMZEG00005000987lsm14b9253.846Maylandia_zebra
ENSMUSG00000039108Lsm14b9180.952ENSMGAG00000005300LSM14B10082.073Meleagris_gallopavo
ENSMUSG00000039108Lsm14b10096.883ENSMAUG00000020700Lsm14b10096.883Mesocricetus_auratus
ENSMUSG00000039108Lsm14b10094.545ENSMICG00000014675LSM14B10094.545Microcebus_murinus
ENSMUSG00000039108Lsm14b9081.091ENSMOCG00000005119-9380.952Microtus_ochrogaster
ENSMUSG00000039108Lsm14b10096.623ENSMOCG00000020600Lsm14b10096.623Microtus_ochrogaster
ENSMUSG00000039108Lsm14b9051.268ENSMMOG00000020042lsm14b9553.611Mola_mola
ENSMUSG00000039108Lsm14b9150.552ENSMMOG00000017321LSM14B9150.552Mola_mola
ENSMUSG00000039108Lsm14b10085.902ENSMODG00000016690LSM14B10085.902Monodelphis_domestica
ENSMUSG00000039108Lsm14b9249.730ENSMALG00000022251LSM14B9249.591Monopterus_albus
ENSMUSG00000039108Lsm14b9454.121ENSMALG00000004783lsm14b9254.131Monopterus_albus
ENSMUSG00000039108Lsm14b10099.740MGP_CAROLIEiJ_G0024770Lsm14b10099.740Mus_caroli
ENSMUSG00000039108Lsm14b10098.961MGP_PahariEiJ_G0026214Lsm14b10098.961Mus_pahari
ENSMUSG00000039108Lsm14b100100.000MGP_SPRETEiJ_G0025693Lsm14b100100.000Mus_spretus
ENSMUSG00000039108Lsm14b10089.180ENSMPUG00000007584LSM14B10077.916Mustela_putorius_furo
ENSMUSG00000039108Lsm14b10090.674ENSMLUG00000000304LSM14B10090.674Myotis_lucifugus
ENSMUSG00000039108Lsm14b7590.909ENSNGAG00000016550Lsm14b10090.909Nannospalax_galili
ENSMUSG00000039108Lsm14b8993.567ENSNLEG00000015757LSM14B10093.567Nomascus_leucogenys
ENSMUSG00000039108Lsm14b6355.102ENSMEUG00000006305-9960.331Notamacropus_eugenii
ENSMUSG00000039108Lsm14b7797.887ENSMEUG00000008267-7697.887Notamacropus_eugenii
ENSMUSG00000039108Lsm14b5095.000ENSOPRG00000000447-5995.000Ochotona_princeps
ENSMUSG00000039108Lsm14b10094.805ENSODEG00000004099LSM14B10094.805Octodon_degus
ENSMUSG00000039108Lsm14b8949.730ENSONIG00000020318lsm14b9253.846Oreochromis_niloticus
ENSMUSG00000039108Lsm14b7282.734ENSOANG00000003370LSM14B9982.623Ornithorhynchus_anatinus
ENSMUSG00000039108Lsm14b8989.535ENSOCUG00000006279LSM14B10089.535Oryctolagus_cuniculus
ENSMUSG00000039108Lsm14b9050.139ENSORLG00000013525lsm14b9252.473Oryzias_latipes
ENSMUSG00000039108Lsm14b9246.341ENSORLG00000028353LSM14B9145.580Oryzias_latipes
ENSMUSG00000039108Lsm14b9050.139ENSORLG00020020553lsm14b9252.473Oryzias_latipes_hni
ENSMUSG00000039108Lsm14b9134.296ENSORLG00020018191-8536.078Oryzias_latipes_hni
ENSMUSG00000039108Lsm14b9246.467ENSORLG00015013157LSM14B9145.706Oryzias_latipes_hsok
ENSMUSG00000039108Lsm14b9050.139ENSORLG00015016862lsm14b9252.473Oryzias_latipes_hsok
ENSMUSG00000039108Lsm14b6438.462ENSOMEG00000000171-9740.310Oryzias_melastigma
ENSMUSG00000039108Lsm14b9050.139ENSOMEG00000023917lsm14b9252.473Oryzias_melastigma
ENSMUSG00000039108Lsm14b10091.803ENSOGAG00000003915LSM14B10085.377Otolemur_garnettii
ENSMUSG00000039108Lsm14b10088.525ENSOARG00000014706LSM14B9880.628Ovis_aries
ENSMUSG00000039108Lsm14b9092.529ENSPPAG00000035799LSM14B9592.529Pan_paniscus
ENSMUSG00000039108Lsm14b10092.468ENSPPRG00000009197LSM14B10092.468Panthera_pardus
ENSMUSG00000039108Lsm14b9789.527ENSPTIG00000021518LSM14B10089.527Panthera_tigris_altaica
ENSMUSG00000039108Lsm14b10094.545ENSPTRG00000013696LSM14B10094.545Pan_troglodytes
ENSMUSG00000039108Lsm14b10094.545ENSPANG00000011747LSM14B10094.545Papio_anubis
ENSMUSG00000039108Lsm14b9961.358ENSPKIG00000003275lsm14b9484.158Paramormyrops_kingsleyae
ENSMUSG00000039108Lsm14b10080.719ENSPSIG00000014762LSM14B10083.526Pelodiscus_sinensis
ENSMUSG00000039108Lsm14b9998.163ENSPEMG00000017688Lsm14b10098.163Peromyscus_maniculatus_bairdii
ENSMUSG00000039108Lsm14b10089.351ENSPCIG00000013405LSM14B10089.351Phascolarctos_cinereus
ENSMUSG00000039108Lsm14b10051.392ENSPFOG00000005631lsm14b9251.791Poecilia_formosa
ENSMUSG00000039108Lsm14b9047.592ENSPLAG00000005793LSM14B9146.648Poecilia_latipinna
ENSMUSG00000039108Lsm14b10051.899ENSPLAG00000002449lsm14b9252.342Poecilia_latipinna
ENSMUSG00000039108Lsm14b10051.392ENSPMEG00000000745lsm14b9251.791Poecilia_mexicana
ENSMUSG00000039108Lsm14b8946.610ENSPMEG00000022953LSM14B9146.409Poecilia_mexicana
ENSMUSG00000039108Lsm14b9037.993ENSPREG00000007828LSM14B8739.768Poecilia_reticulata
ENSMUSG00000039108Lsm14b10075.750ENSPPYG00000011194LSM14B10075.500Pongo_abelii
ENSMUSG00000039108Lsm14b10094.805ENSPCOG00000013625LSM14B10094.805Propithecus_coquereli
ENSMUSG00000039108Lsm14b10066.230ENSPVAG00000017918LSM14B10072.204Pteropus_vampyrus
ENSMUSG00000039108Lsm14b9961.125ENSPNAG00000012777lsm14b9961.125Pygocentrus_nattereri
ENSMUSG00000039108Lsm14b10098.361ENSRNOG00000054557Lsm14b10089.387Rattus_norvegicus
ENSMUSG00000039108Lsm14b10091.475ENSRBIG00000033461LSM14B9993.003Rhinopithecus_bieti
ENSMUSG00000039108Lsm14b10091.803ENSRROG00000042949LSM14B10091.803Rhinopithecus_roxellana
ENSMUSG00000039108Lsm14b10086.293ENSSBOG00000032820LSM14B10092.690Saimiri_boliviensis_boliviensis
ENSMUSG00000039108Lsm14b10085.902ENSSHAG00000015528LSM14B10085.902Sarcophilus_harrisii
ENSMUSG00000039108Lsm14b9060.224ENSSFOG00015004627lsm14b9261.667Scleropages_formosus
ENSMUSG00000039108Lsm14b9752.468ENSSMAG00000000135LSM14B9252.732Scophthalmus_maximus
ENSMUSG00000039108Lsm14b9055.402ENSSMAG00000012725lsm14b9255.738Scophthalmus_maximus
ENSMUSG00000039108Lsm14b9253.151ENSSDUG00000022770LSM14B9253.315Seriola_dumerili
ENSMUSG00000039108Lsm14b9054.571ENSSDUG00000020977lsm14b9254.918Seriola_dumerili
ENSMUSG00000039108Lsm14b9037.589ENSSLDG00000011354-8943.922Seriola_lalandi_dorsalis
ENSMUSG00000039108Lsm14b6782.126ENSSARG00000007749-10082.126Sorex_araneus
ENSMUSG00000039108Lsm14b10081.494ENSSPUG00000014360LSM14B9682.698Sphenodon_punctatus
ENSMUSG00000039108Lsm14b9055.840ENSSPAG00000020915lsm14b9256.461Stegastes_partitus
ENSMUSG00000039108Lsm14b9538.276ENSSPAG00000018854-8840.891Stegastes_partitus
ENSMUSG00000039108Lsm14b10090.909ENSSSCG00000026052LSM14B10088.525Sus_scrofa
ENSMUSG00000039108Lsm14b9084.770ENSTGUG00000007884LSM14B10084.770Taeniopygia_guttata
ENSMUSG00000039108Lsm14b10052.030ENSTRUG00000011354lsm14b10051.263Takifugu_rubripes
ENSMUSG00000039108Lsm14b9250.407ENSTRUG00000001529LSM14B9250.273Takifugu_rubripes
ENSMUSG00000039108Lsm14b9256.111ENSTNIG00000002445lsm14b9256.111Tetraodon_nigroviridis
ENSMUSG00000039108Lsm14b83100.000ENSTTRG00000011043LSM14B10061.250Tursiops_truncatus
ENSMUSG00000039108Lsm14b10090.492ENSUAMG00000025298LSM14B9985.676Ursus_americanus
ENSMUSG00000039108Lsm14b10090.492ENSUMAG00000000480LSM14B9985.676Ursus_maritimus
ENSMUSG00000039108Lsm14b10089.180ENSVVUG00000015920LSM14B10089.180Vulpes_vulpes
ENSMUSG00000039108Lsm14b8475.841ENSXETG00000001997lsm14b9976.758Xenopus_tropicalis
ENSMUSG00000039108Lsm14b9049.582ENSXMAG00000010013lsm14b9250.000Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0006417regulation of translation-IEAProcess
GO:0007275multicellular organism development-IEAProcess
GO:0008150biological_process-NDProcess

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