EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000039130 (Gene tree)
Gene ID
232679
Gene Symbol
Zc3hc1
Alias
1110054L24Rik|HSPC216|Nipa
Full Name
zinc finger%2C C3HC type 1
Gene Type
protein_coding
Species
Mus_musculus
Status
putative
Strand
Minus strand
Length
24649 bases
Position
chr6:30366380-30391028
Accession
1916023
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000110838zf-C3HCPF07967.134.4e-3611
ENSMUSP00000135447zf-C3HCPF07967.137.2e-3611
ENSMUSP00000100057zf-C3HCPF07967.131.2e-3511
ENSMUSP00000079627zf-C3HCPF07967.131.4e-3511
ENSMUSP00000100057Rsm1PF08600.105.2e-1611
ENSMUSP00000079627Rsm1PF08600.105.9e-1611
ENSMUSP00000110838Rsm1PF08600.102.9e-1511
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000080812-1824-ENSMUSP00000079627501 (aa)-Q80YV2
ENSMUST00000138983-447--- (aa)--
ENSMUST00000115184-1504-ENSMUSP00000110838430 (aa)-D3Z3D0
ENSMUST00000129796-362--- (aa)--
ENSMUST00000152101-2908--- (aa)--
ENSMUST00000126945-477--- (aa)--
ENSMUST00000102992-1865XM_017321571ENSMUSP00000100057481 (aa)XP_017177060Q80YV2
ENSMUST00000147990-556-ENSMUSP0000011648445 (aa)-D3Z5A4
ENSMUST00000202393-831--- (aa)--
ENSMUST00000136255-787-ENSMUSP0000011543349 (aa)-D3Z0B2
ENSMUST00000152391-1673-ENSMUSP00000135447459 (aa)-H3BKM2
Gene Model
Click here to download ENSMUSG00000039130's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000039130's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000039130Zc3hc19985.542ENSG00000091732ZC3HC19985.542Homo_sapiens
ENSMUSG00000039130Zc3hc19545.672ENSAPOG00000009078zc3hc19642.800Acanthochromis_polyacanthus
ENSMUSG00000039130Zc3hc110085.119ENSAMEG00000005425ZC3HC110085.119Ailuropoda_melanoleuca
ENSMUSG00000039130Zc3hc19545.427ENSACIG00000019513zc3hc19641.717Amphilophus_citrinellus
ENSMUSG00000039130Zc3hc19546.269ENSAOCG00000024310zc3hc19643.400Amphiprion_ocellaris
ENSMUSG00000039130Zc3hc19546.269ENSAPEG00000004907zc3hc19643.400Amphiprion_percula
ENSMUSG00000039130Zc3hc18446.462ENSATEG00000016898zc3hc18546.009Anabas_testudineus
ENSMUSG00000039130Zc3hc18859.234ENSAPLG00000003832ZC3HC19959.234Anas_platyrhynchos
ENSMUSG00000039130Zc3hc19560.408ENSACAG00000001638ZC3HC19560.408Anolis_carolinensis
ENSMUSG00000039130Zc3hc110084.455ENSANAG00000022213ZC3HC110084.455Aotus_nancymaae
ENSMUSG00000039130Zc3hc18746.906ENSACLG00000025033zc3hc19942.887Astatotilapia_calliptera
ENSMUSG00000039130Zc3hc19942.710ENSAMXG00000036792zc3hc110041.352Astyanax_mexicanus
ENSMUSG00000039130Zc3hc110084.861ENSBTAG00000011247ZC3HC110084.861Bos_taurus
ENSMUSG00000039130Zc3hc110084.064ENSCJAG00000010536ZC3HC19985.366Callithrix_jacchus
ENSMUSG00000039130Zc3hc110087.052ENSCAFG00000031850-10087.052Canis_familiaris
ENSMUSG00000039130Zc3hc110086.653ENSCAFG00000028735-10086.653Canis_familiaris
ENSMUSG00000039130Zc3hc110086.653ENSCAFG00000029401-9986.653Canis_familiaris
ENSMUSG00000039130Zc3hc110086.139ENSCAFG00000001499-9986.139Canis_familiaris
ENSMUSG00000039130Zc3hc110086.853ENSCAFG00020006829-10086.853Canis_lupus_dingo
ENSMUSG00000039130Zc3hc110085.119ENSCAFG00020023333-10085.119Canis_lupus_dingo
ENSMUSG00000039130Zc3hc110078.088ENSCHIG00000014103ZC3HC110078.088Capra_hircus
ENSMUSG00000039130Zc3hc110082.072ENSTSYG00000002843ZC3HC19982.530Carlito_syrichta
ENSMUSG00000039130Zc3hc19063.596ENSCAPG00000016300ZC3HC110062.175Cavia_aperea
ENSMUSG00000039130Zc3hc110080.742ENSCPOG00000014034ZC3HC110080.742Cavia_porcellus
ENSMUSG00000039130Zc3hc110067.729ENSCCAG00000020384ZC3HC110087.225Cebus_capucinus
ENSMUSG00000039130Zc3hc110085.857ENSCATG00000023130ZC3HC110085.857Cercocebus_atys
ENSMUSG00000039130Zc3hc110063.617ENSCLAG00000008260ZC3HC110063.261Chinchilla_lanigera
ENSMUSG00000039130Zc3hc17386.339ENSCSAG00000009881ZC3HC19786.339Chlorocebus_sabaeus
ENSMUSG00000039130Zc3hc18985.523ENSCHOG00000011846ZC3HC19985.523Choloepus_hoffmanni
ENSMUSG00000039130Zc3hc19665.638ENSCPBG00000017519ZC3HC19765.638Chrysemys_picta_bellii
ENSMUSG00000039130Zc3hc110085.458ENSCANG00000029091ZC3HC110085.458Colobus_angolensis_palliatus
ENSMUSG00000039130Zc3hc110090.852ENSCGRG00001018805Zc3hc110090.852Cricetulus_griseus_chok1gshd
ENSMUSG00000039130Zc3hc110089.621ENSCGRG00000017114Zc3hc110089.621Cricetulus_griseus_crigri
ENSMUSG00000039130Zc3hc19642.315ENSCSEG00000009284zc3hc19541.916Cynoglossus_semilaevis
ENSMUSG00000039130Zc3hc19345.732ENSCVAG00000011566zc3hc19542.626Cyprinodon_variegatus
ENSMUSG00000039130Zc3hc19647.166ENSDARG00000062651zc3hc19647.166Danio_rerio
ENSMUSG00000039130Zc3hc110083.665ENSDNOG00000045016ZC3HC110083.665Dasypus_novemcinctus
ENSMUSG00000039130Zc3hc110076.494ENSDORG00000008697Zc3hc110076.494Dipodomys_ordii
ENSMUSG00000039130Zc3hc19087.389ENSEASG00005008789ZC3HC19787.389Equus_asinus_asinus
ENSMUSG00000039130Zc3hc110085.288ENSECAG00000017886ZC3HC110085.288Equus_caballus
ENSMUSG00000039130Zc3hc19277.778ENSEEUG00000003123ZC3HC18477.778Erinaceus_europaeus
ENSMUSG00000039130Zc3hc19348.606ENSELUG00000023168zc3hc19843.545Esox_lucius
ENSMUSG00000039130Zc3hc110084.263ENSFCAG00000010429ZC3HC110084.263Felis_catus
ENSMUSG00000039130Zc3hc19057.051ENSFALG00000005006ZC3HC110057.051Ficedula_albicollis
ENSMUSG00000039130Zc3hc110082.367ENSFDAG00000019897ZC3HC110082.367Fukomys_damarensis
ENSMUSG00000039130Zc3hc19545.482ENSFHEG00000020149zc3hc19641.650Fundulus_heteroclitus
ENSMUSG00000039130Zc3hc19441.649ENSGMOG00000002914zc3hc19540.326Gadus_morhua
ENSMUSG00000039130Zc3hc19860.282ENSGALG00000008003ZC3HC19960.569Gallus_gallus
ENSMUSG00000039130Zc3hc19643.287ENSGAFG00000016095zc3hc19642.914Gambusia_affinis
ENSMUSG00000039130Zc3hc19443.967ENSGACG00000019706zc3hc19543.585Gasterosteus_aculeatus
ENSMUSG00000039130Zc3hc17766.244ENSGAGG00000016106ZC3HC110066.244Gopherus_agassizii
ENSMUSG00000039130Zc3hc19985.341ENSGGOG00000015504ZC3HC19985.341Gorilla_gorilla
ENSMUSG00000039130Zc3hc19345.897ENSHBUG00000008347zc3hc19542.394Haplochromis_burtoni
ENSMUSG00000039130Zc3hc110082.669ENSHGLG00000005085ZC3HC110082.669Heterocephalus_glaber_female
ENSMUSG00000039130Zc3hc110082.470ENSHGLG00100011395ZC3HC110082.470Heterocephalus_glaber_male
ENSMUSG00000039130Zc3hc19642.331ENSHCOG00000014309zc3hc19642.449Hippocampus_comes
ENSMUSG00000039130Zc3hc110084.861ENSSTOG00000023599-10084.861Ictidomys_tridecemlineatus
ENSMUSG00000039130Zc3hc19346.789ENSKMAG00000015315zc3hc18942.799Kryptolebias_marmoratus
ENSMUSG00000039130Zc3hc19445.161ENSLBEG00000017325zc3hc19642.460Labrus_bergylta
ENSMUSG00000039130Zc3hc18154.545ENSLACG00000013032ZC3HC19652.174Latimeria_chalumnae
ENSMUSG00000039130Zc3hc19953.468ENSLOCG00000015963zc3hc19652.138Lepisosteus_oculatus
ENSMUSG00000039130Zc3hc110082.609ENSLAFG00000001292ZC3HC110082.609Loxodonta_africana
ENSMUSG00000039130Zc3hc110085.657ENSMFAG00000030176ZC3HC110085.657Macaca_fascicularis
ENSMUSG00000039130Zc3hc110085.383ENSMMUG00000006155ZC3HC19986.538Macaca_mulatta
ENSMUSG00000039130Zc3hc110085.857ENSMNEG00000011833ZC3HC19888.462Macaca_nemestrina
ENSMUSG00000039130Zc3hc110085.857ENSMLEG00000027328ZC3HC110085.857Mandrillus_leucophaeus
ENSMUSG00000039130Zc3hc19546.450ENSMAMG00000010691zc3hc19643.426Mastacembelus_armatus
ENSMUSG00000039130Zc3hc19345.593ENSMZEG00005007142zc3hc19542.191Maylandia_zebra
ENSMUSG00000039130Zc3hc19859.960ENSMGAG00000002977ZC3HC110060.359Meleagris_gallopavo
ENSMUSG00000039130Zc3hc18283.816ENSMAUG00000017032Zc3hc19283.816Mesocricetus_auratus
ENSMUSG00000039130Zc3hc110084.661ENSMICG00000009167ZC3HC110084.661Microcebus_murinus
ENSMUSG00000039130Zc3hc110088.623ENSMOCG00000015239Zc3hc110088.623Microtus_ochrogaster
ENSMUSG00000039130Zc3hc18742.544ENSMMOG00000002204zc3hc19942.325Mola_mola
ENSMUSG00000039130Zc3hc110061.538ENSMODG00000014630ZC3HC110061.538Monodelphis_domestica
ENSMUSG00000039130Zc3hc19345.584ENSMALG00000014447zc3hc19643.195Monopterus_albus
ENSMUSG00000039130Zc3hc110096.732MGP_CAROLIEiJ_G0028183Zc3hc110096.732Mus_caroli
ENSMUSG00000039130Zc3hc110087.582MGP_PahariEiJ_G0021941Zc3hc110087.582Mus_pahari
ENSMUSG00000039130Zc3hc110099.302MGP_SPRETEiJ_G0029183Zc3hc110099.302Mus_spretus
ENSMUSG00000039130Zc3hc110084.025ENSMPUG00000005297ZC3HC19584.551Mustela_putorius_furo
ENSMUSG00000039130Zc3hc110083.168ENSMLUG00000000063-10083.168Myotis_lucifugus
ENSMUSG00000039130Zc3hc16681.191ENSMLUG00000029228-9978.235Myotis_lucifugus
ENSMUSG00000039130Zc3hc110085.857ENSNGAG00000019014Zc3hc110085.857Nannospalax_galili
ENSMUSG00000039130Zc3hc19345.897ENSNBRG00000004577zc3hc19542.276Neolamprologus_brichardi
ENSMUSG00000039130Zc3hc19984.538ENSNLEG00000012698ZC3HC19984.538Nomascus_leucogenys
ENSMUSG00000039130Zc3hc110074.701ENSMEUG00000011023ZC3HC110074.701Notamacropus_eugenii
ENSMUSG00000039130Zc3hc17676.357ENSOPRG00000007867-6876.357Ochotona_princeps
ENSMUSG00000039130Zc3hc110080.478ENSODEG00000014604ZC3HC110080.278Octodon_degus
ENSMUSG00000039130Zc3hc19443.205ENSONIG00000011644zc3hc19542.799Oreochromis_niloticus
ENSMUSG00000039130Zc3hc19066.379ENSOANG00000011460ZC3HC110066.379Ornithorhynchus_anatinus
ENSMUSG00000039130Zc3hc110080.396ENSOCUG00000017137ZC3HC110080.396Oryctolagus_cuniculus
ENSMUSG00000039130Zc3hc19447.590ENSORLG00000014409zc3hc19543.725Oryzias_latipes
ENSMUSG00000039130Zc3hc19447.289ENSORLG00020015874zc3hc19543.522Oryzias_latipes_hni
ENSMUSG00000039130Zc3hc19147.975ENSORLG00015014641zc3hc19543.320Oryzias_latipes_hsok
ENSMUSG00000039130Zc3hc19543.867ENSOMEG00000000215zc3hc19544.239Oryzias_melastigma
ENSMUSG00000039130Zc3hc19543.867ENSOMEG00000020604zc3hc19544.239Oryzias_melastigma
ENSMUSG00000039130Zc3hc110078.486ENSOGAG00000026193ZC3HC110078.486Otolemur_garnettii
ENSMUSG00000039130Zc3hc110084.554ENSOARG00000004907ZC3HC19984.554Ovis_aries
ENSMUSG00000039130Zc3hc19985.542ENSPPAG00000043172ZC3HC19985.542Pan_paniscus
ENSMUSG00000039130Zc3hc19985.000ENSPPRG00000001004ZC3HC19983.936Panthera_pardus
ENSMUSG00000039130Zc3hc110084.064ENSPTIG00000007823ZC3HC110084.064Panthera_tigris_altaica
ENSMUSG00000039130Zc3hc19985.341ENSPTRG00000019685ZC3HC19985.341Pan_troglodytes
ENSMUSG00000039130Zc3hc110085.383ENSPANG00000014229ZC3HC110085.383Papio_anubis
ENSMUSG00000039130Zc3hc19550.625ENSPKIG00000007172zc3hc19646.830Paramormyrops_kingsleyae
ENSMUSG00000039130Zc3hc19263.087ENSPSIG00000016646ZC3HC19757.778Pelodiscus_sinensis
ENSMUSG00000039130Zc3hc19050.202ENSPMGG00000003548zc3hc19642.523Periophthalmus_magnuspinnatus
ENSMUSG00000039130Zc3hc110088.837ENSPEMG00000000514Zc3hc110088.837Peromyscus_maniculatus_bairdii
ENSMUSG00000039130Zc3hc19971.657ENSPCIG00000020619ZC3HC110075.321Phascolarctos_cinereus
ENSMUSG00000039130Zc3hc19545.646ENSPFOG00000003466zc3hc19642.715Poecilia_formosa
ENSMUSG00000039130Zc3hc19545.345ENSPLAG00000022211zc3hc19642.515Poecilia_latipinna
ENSMUSG00000039130Zc3hc19545.646ENSPMEG00000001458zc3hc19642.715Poecilia_mexicana
ENSMUSG00000039130Zc3hc19642.886ENSPREG00000004004zc3hc19642.515Poecilia_reticulata
ENSMUSG00000039130Zc3hc19977.400ENSPPYG00000017998ZC3HC19977.400Pongo_abelii
ENSMUSG00000039130Zc3hc19280.217ENSPCAG00000001182ZC3HC110080.217Procavia_capensis
ENSMUSG00000039130Zc3hc110085.060ENSPCOG00000017354ZC3HC110085.060Propithecus_coquereli
ENSMUSG00000039130Zc3hc110080.080ENSPVAG00000003195ZC3HC110080.279Pteropus_vampyrus
ENSMUSG00000039130Zc3hc19345.593ENSPNYG00000020692zc3hc19542.191Pundamilia_nyererei
ENSMUSG00000039130Zc3hc19345.374ENSPNAG00000020746zc3hc19543.697Pygocentrus_nattereri
ENSMUSG00000039130Zc3hc110092.629ENSRNOG00000010154Zc3hc110092.629Rattus_norvegicus
ENSMUSG00000039130Zc3hc19086.976ENSRBIG00000029409ZC3HC110086.976Rhinopithecus_bieti
ENSMUSG00000039130Zc3hc110085.458ENSRROG00000041831ZC3HC110085.458Rhinopithecus_roxellana
ENSMUSG00000039130Zc3hc19376.316ENSSBOG00000032787ZC3HC19986.341Saimiri_boliviensis_boliviensis
ENSMUSG00000039130Zc3hc19274.839ENSSHAG00000002529ZC3HC110074.839Sarcophilus_harrisii
ENSMUSG00000039130Zc3hc19649.385ENSSFOG00015003667zc3hc19249.080Scleropages_formosus
ENSMUSG00000039130Zc3hc19541.683ENSSMAG00000000647zc3hc18641.800Scophthalmus_maximus
ENSMUSG00000039130Zc3hc19546.726ENSSDUG00000004241zc3hc19443.800Seriola_dumerili
ENSMUSG00000039130Zc3hc19546.429ENSSLDG00000025056zc3hc19443.600Seriola_lalandi_dorsalis
ENSMUSG00000039130Zc3hc19974.251ENSSARG00000012013ZC3HC19974.251Sorex_araneus
ENSMUSG00000039130Zc3hc19056.720ENSSPUG00000000778ZC3HC18662.690Sphenodon_punctatus
ENSMUSG00000039130Zc3hc19545.970ENSSPAG00000020041zc3hc19643.600Stegastes_partitus
ENSMUSG00000039130Zc3hc110084.263ENSSSCG00000016565ZC3HC110084.833Sus_scrofa
ENSMUSG00000039130Zc3hc19542.566ENSTRUG00000020077zc3hc19542.363Takifugu_rubripes
ENSMUSG00000039130Zc3hc19346.914ENSTNIG00000007585zc3hc19941.736Tetraodon_nigroviridis
ENSMUSG00000039130Zc3hc19974.900ENSTBEG00000005216ZC3HC19974.900Tupaia_belangeri
ENSMUSG00000039130Zc3hc19585.417ENSTTRG00000008458ZC3HC110085.417Tursiops_truncatus
ENSMUSG00000039130Zc3hc110085.657ENSUAMG00000020249ZC3HC110085.657Ursus_americanus
ENSMUSG00000039130Zc3hc110085.060ENSUMAG00000009268ZC3HC110085.060Ursus_maritimus
ENSMUSG00000039130Zc3hc19087.755ENSVPAG00000010846ZC3HC17787.755Vicugna_pacos
ENSMUSG00000039130Zc3hc110085.685ENSVVUG00000012386ZC3HC110085.685Vulpes_vulpes
ENSMUSG00000039130Zc3hc19552.248ENSXETG00000033900zc3hc19652.248Xenopus_tropicalis
ENSMUSG00000039130Zc3hc19642.369ENSXCOG00000013570zc3hc19643.367Xiphophorus_couchianus
ENSMUSG00000039130Zc3hc18744.176ENSXMAG00000010979zc3hc19543.764Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0005515protein binding12748172.IPIFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005634nucleus12748172.IDAComponent
GO:0005634nucleus-ISOComponent
GO:0007049cell cycle-IEAProcess
GO:0008270zinc ion binding-IEAFunction
GO:0019901protein kinase binding-ISOFunction
GO:0031965nuclear membrane-ISOComponent
GO:0046872metal ion binding-IEAFunction
GO:0051301cell division-IEAProcess
GO:2001240negative regulation of extrinsic apoptotic signaling pathway in absence of ligand12748172.IDAProcess

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