EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000039236 (Gene tree)
Gene ID: 57444
Gene Symbol: Isg20
Alias: 1600023I01Rik|2010107M23Rik|20kDa|DnaQl|HEM45
Full Name: interferon-stimulated protein
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 6973 bases
Position: chr7:78913424-78920396
Accession: 1928895
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000040080	RNase_T	PF00929.24	3.5e-16	1	1
ENSMUSP00000112480	RNase_T	PF00929.24	3.5e-16	1	1
ENSMUSP00000113255	RNase_T	PF00929.24	3.5e-16	1	1
ENSMUSP00000145840	RNase_T	PF00929.24	1.8e-11	1	1
ENSMUSP00000112621	RNase_T	PF00929.24	1.7e-10	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000121645	-	1087	XM_006541026	ENSMUSP00000112621	300 (aa)	XP_006541089	Q9JL16
ENSMUST00000118867	-	697	-	ENSMUSP00000112480	181 (aa)	-	Q9JL16
ENSMUST00000133042	-	801	-	-	- (aa)	-	-
ENSMUST00000120331	-	845	-	ENSMUSP00000113255	181 (aa)	-	Q9JL16
ENSMUST00000038142	-	1083	-	ENSMUSP00000040080	181 (aa)	-	Q9JL16
ENSMUST00000205981	-	834	-	ENSMUSP00000145840	145 (aa)	-	A0A0U1RP59

Gene Model

Click here to download ENSMUSG00000039236's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000039236's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000039236	Isg20	94	56.934	ENSMUSG00000030609	Aen	68	56.911

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000039236	Isg20	99	84.028	ENSG00000172183	ISG20	100	81.768	Homo_sapiens
ENSMUSG00000039236	Isg20	100	69.655	ENSAMEG00000012803	ISG20	100	70.760	Ailuropoda_melanoleuca
ENSMUSG00000039236	Isg20	94	50.725	ENSACIG00000012040	isg20	71	47.414	Amphilophus_citrinellus
ENSMUSG00000039236	Isg20	87	39.264	ENSACAG00000013905	-	59	38.788	Anolis_carolinensis
ENSMUSG00000039236	Isg20	99	72.917	ENSBTAG00000014762	ISG20	100	71.345	Bos_taurus
ENSMUSG00000039236	Isg20	99	80.556	ENSCJAG00000034923	ISG20	100	79.006	Callithrix_jacchus
ENSMUSG00000039236	Isg20	99	75.000	ENSCAFG00000011525	ISG20	100	73.099	Canis_familiaris
ENSMUSG00000039236	Isg20	99	75.524	ENSCAFG00020018837	ISG20	100	73.099	Canis_lupus_dingo
ENSMUSG00000039236	Isg20	99	72.917	ENSCHIG00000014526	ISG20	100	71.345	Capra_hircus
ENSMUSG00000039236	Isg20	99	79.861	ENSTSYG00000030528	ISG20	97	77.714	Carlito_syrichta
ENSMUSG00000039236	Isg20	99	75.000	ENSCAPG00000011672	ISG20	100	73.481	Cavia_aperea
ENSMUSG00000039236	Isg20	99	75.000	ENSCPOG00000036489	ISG20	100	72.928	Cavia_porcellus
ENSMUSG00000039236	Isg20	99	81.250	ENSCCAG00000025395	ISG20	100	79.006	Cebus_capucinus
ENSMUSG00000039236	Isg20	99	82.639	ENSCATG00000042494	ISG20	100	80.110	Cercocebus_atys
ENSMUSG00000039236	Isg20	99	76.389	ENSCLAG00000008100	ISG20	100	74.033	Chinchilla_lanigera
ENSMUSG00000039236	Isg20	99	83.333	ENSCSAG00000017194	ISG20	100	80.663	Chlorocebus_sabaeus
ENSMUSG00000039236	Isg20	94	38.028	ENSCING00000004431	-	81	40.123	Ciona_intestinalis
ENSMUSG00000039236	Isg20	99	82.639	ENSCANG00000032616	ISG20	100	80.663	Colobus_angolensis_palliatus
ENSMUSG00000039236	Isg20	99	86.713	ENSCGRG00001016300	-	98	86.713	Cricetulus_griseus_chok1gshd
ENSMUSG00000039236	Isg20	99	86.111	ENSCGRG00000000609	-	99	85.165	Cricetulus_griseus_crigri
ENSMUSG00000039236	Isg20	90	50.000	ENSCVAG00000009300	isg20	76	50.311	Cyprinodon_variegatus
ENSMUSG00000039236	Isg20	94	47.368	ENSDARG00000102266	isg20l2	53	47.368	Danio_rerio
ENSMUSG00000039236	Isg20	99	72.028	ENSDNOG00000049229	ISG20	99	68.333	Dasypus_novemcinctus
ENSMUSG00000039236	Isg20	94	45.985	ENSEBUG00000010461	ISG20	56	48.734	Eptatretus_burgeri
ENSMUSG00000039236	Isg20	95	49.640	ENSEBUG00000009658	-	84	47.429	Eptatretus_burgeri
ENSMUSG00000039236	Isg20	99	74.306	ENSEASG00005015360	ISG20	99	75.148	Equus_asinus_asinus
ENSMUSG00000039236	Isg20	99	74.306	ENSECAG00000019499	ISG20	99	75.148	Equus_caballus
ENSMUSG00000039236	Isg20	99	72.222	ENSFCAG00000005151	ISG20	100	71.930	Felis_catus
ENSMUSG00000039236	Isg20	99	75.694	ENSFDAG00000007444	ISG20	100	74.033	Fukomys_damarensis
ENSMUSG00000039236	Isg20	87	49.686	ENSFHEG00000018658	isg20	69	44.915	Fundulus_heteroclitus
ENSMUSG00000039236	Isg20	94	45.652	ENSGMOG00000001258	isg20	73	46.541	Gadus_morhua
ENSMUSG00000039236	Isg20	94	49.635	ENSGALG00000044204	ISG20	63	50.633	Gallus_gallus
ENSMUSG00000039236	Isg20	94	50.725	ENSGAFG00000005685	isg20	72	52.174	Gambusia_affinis
ENSMUSG00000039236	Isg20	95	48.201	ENSGACG00000007047	isg20	50	50.000	Gasterosteus_aculeatus
ENSMUSG00000039236	Isg20	99	56.944	ENSGAGG00000013542	ISG20	96	56.287	Gopherus_agassizii
ENSMUSG00000039236	Isg20	99	84.028	ENSGGOG00000010365	ISG20	100	81.768	Gorilla_gorilla
ENSMUSG00000039236	Isg20	99	76.389	ENSHGLG00000009077	ISG20	100	75.138	Heterocephalus_glaber_female
ENSMUSG00000039236	Isg20	99	76.389	ENSHGLG00100005004	ISG20	100	75.138	Heterocephalus_glaber_male
ENSMUSG00000039236	Isg20	98	44.444	ENSHCOG00000013913	isg20l2	82	43.709	Hippocampus_comes
ENSMUSG00000039236	Isg20	99	79.167	ENSSTOG00000020467	ISG20	97	78.857	Ictidomys_tridecemlineatus
ENSMUSG00000039236	Isg20	99	79.861	ENSJJAG00000010531	-	96	80.347	Jaculus_jaculus
ENSMUSG00000039236	Isg20	94	48.905	ENSLACG00000018339	-	56	50.000	Latimeria_chalumnae
ENSMUSG00000039236	Isg20	95	49.640	ENSLOCG00000014240	isg20	73	49.693	Lepisosteus_oculatus
ENSMUSG00000039236	Isg20	99	82.639	ENSMFAG00000032331	ISG20	100	80.110	Macaca_fascicularis
ENSMUSG00000039236	Isg20	99	82.639	ENSMMUG00000007669	ISG20	100	80.110	Macaca_mulatta
ENSMUSG00000039236	Isg20	99	82.639	ENSMNEG00000030310	ISG20	100	80.110	Macaca_nemestrina
ENSMUSG00000039236	Isg20	99	82.639	ENSMLEG00000038761	ISG20	100	80.110	Mandrillus_leucophaeus
ENSMUSG00000039236	Isg20	99	84.722	ENSMAUG00000015001	-	99	83.516	Mesocricetus_auratus
ENSMUSG00000039236	Isg20	99	79.861	ENSMICG00000027508	ISG20	100	78.363	Microcebus_murinus
ENSMUSG00000039236	Isg20	99	79.888	ENSMOCG00000005940	-	100	79.888	Microtus_ochrogaster
ENSMUSG00000039236	Isg20	94	47.101	ENSMMOG00000019013	isg20	77	56.000	Mola_mola
ENSMUSG00000039236	Isg20	96	64.748	ENSMODG00000019583	ISG20	93	66.463	Monodelphis_domestica
ENSMUSG00000039236	Isg20	100	99.448	MGP_CAROLIEiJ_G0029873	-	100	99.448	Mus_caroli
ENSMUSG00000039236	Isg20	100	97.931	MGP_PahariEiJ_G0013095	-	100	97.931	Mus_pahari
ENSMUSG00000039236	Isg20	100	99.448	MGP_SPRETEiJ_G0030975	-	100	99.448	Mus_spretus
ENSMUSG00000039236	Isg20	99	64.336	ENSMPUG00000015816	ISG20	100	66.082	Mustela_putorius_furo
ENSMUSG00000039236	Isg20	99	87.500	ENSNGAG00000019782	-	99	87.429	Nannospalax_galili
ENSMUSG00000039236	Isg20	91	79.878	ENSNLEG00000033379	ISG20	100	79.878	Nomascus_leucogenys
ENSMUSG00000039236	Isg20	99	75.000	ENSODEG00000015032	ISG20	97	73.714	Octodon_degus
ENSMUSG00000039236	Isg20	97	45.390	ENSONIG00000001534	isg20l2	89	47.561	Oreochromis_niloticus
ENSMUSG00000039236	Isg20	99	64.583	ENSOANG00000006380	ISG20	79	64.138	Ornithorhynchus_anatinus
ENSMUSG00000039236	Isg20	99	77.083	ENSOCUG00000023346	ISG20	100	75.691	Oryctolagus_cuniculus
ENSMUSG00000039236	Isg20	95	48.921	ENSORLG00000029585	isg20	81	49.112	Oryzias_latipes
ENSMUSG00000039236	Isg20	95	49.640	ENSORLG00015016089	isg20	71	49.704	Oryzias_latipes_hsok
ENSMUSG00000039236	Isg20	95	48.201	ENSOMEG00000003990	isg20	95	48.521	Oryzias_melastigma
ENSMUSG00000039236	Isg20	99	81.250	ENSOGAG00000004742	ISG20	100	79.532	Otolemur_garnettii
ENSMUSG00000039236	Isg20	96	60.920	ENSOARG00000010964	ISG20	95	60.920	Ovis_aries
ENSMUSG00000039236	Isg20	99	83.916	ENSPPAG00000028868	ISG20	100	80.663	Pan_paniscus
ENSMUSG00000039236	Isg20	99	72.917	ENSPPRG00000023560	ISG20	100	73.099	Panthera_pardus
ENSMUSG00000039236	Isg20	92	76.692	ENSPTIG00000018498	ISG20	71	74.638	Panthera_tigris_altaica
ENSMUSG00000039236	Isg20	99	84.028	ENSPTRG00000044668	ISG20	100	81.768	Pan_troglodytes
ENSMUSG00000039236	Isg20	99	81.944	ENSPANG00000034658	ISG20	100	79.558	Papio_anubis
ENSMUSG00000039236	Isg20	99	44.521	ENSPMGG00000021232	isg20	78	49.057	Periophthalmus_magnuspinnatus
ENSMUSG00000039236	Isg20	99	87.500	ENSPEMG00000020302	-	99	84.615	Peromyscus_maniculatus_bairdii
ENSMUSG00000039236	Isg20	99	46.897	ENSPMAG00000001569	ISG20	91	47.619	Petromyzon_marinus
ENSMUSG00000039236	Isg20	93	47.059	ENSPMAG00000000577	isg20	87	46.541	Petromyzon_marinus
ENSMUSG00000039236	Isg20	96	63.309	ENSPCIG00000006405	ISG20	89	64.458	Phascolarctos_cinereus
ENSMUSG00000039236	Isg20	94	51.449	ENSPLAG00000005932	isg20	78	51.299	Poecilia_latipinna
ENSMUSG00000039236	Isg20	94	51.449	ENSPMEG00000016899	isg20	72	52.795	Poecilia_mexicana
ENSMUSG00000039236	Isg20	86	50.400	ENSPREG00000005954	isg20	64	50.714	Poecilia_reticulata
ENSMUSG00000039236	Isg20	99	83.333	ENSPPYG00000006756	ISG20	100	81.215	Pongo_abelii
ENSMUSG00000039236	Isg20	99	78.472	ENSPCOG00000015727	ISG20	97	78.107	Propithecus_coquereli
ENSMUSG00000039236	Isg20	99	89.674	ENSRNOG00000054561	Isg20	99	92.398	Rattus_norvegicus
ENSMUSG00000039236	Isg20	99	82.639	ENSRBIG00000041506	ISG20	100	80.663	Rhinopithecus_bieti
ENSMUSG00000039236	Isg20	99	82.639	ENSRROG00000043326	ISG20	100	80.663	Rhinopithecus_roxellana
ENSMUSG00000039236	Isg20	99	81.250	ENSSBOG00000031539	ISG20	100	77.901	Saimiri_boliviensis_boliviensis
ENSMUSG00000039236	Isg20	96	64.748	ENSSHAG00000017049	ISG20	97	65.060	Sarcophilus_harrisii
ENSMUSG00000039236	Isg20	94	49.275	ENSSMAG00000004520	isg20	50	50.943	Scophthalmus_maximus
ENSMUSG00000039236	Isg20	99	61.806	ENSSPUG00000012061	ISG20	97	61.677	Sphenodon_punctatus
ENSMUSG00000039236	Isg20	99	75.694	ENSSSCG00000024867	ISG20	100	73.684	Sus_scrofa
ENSMUSG00000039236	Isg20	98	45.833	ENSTRUG00000021768	isg20l2	51	49.091	Takifugu_rubripes
ENSMUSG00000039236	Isg20	90	50.382	ENSTNIG00000010389	isg20	75	51.316	Tetraodon_nigroviridis
ENSMUSG00000039236	Isg20	99	71.329	ENSUAMG00000019065	ISG20	97	71.528	Ursus_americanus
ENSMUSG00000039236	Isg20	99	72.917	ENSVVUG00000012013	ISG20	100	72.515	Vulpes_vulpes
ENSMUSG00000039236	Isg20	94	52.555	ENSXETG00000007588	aen	62	53.165	Xenopus_tropicalis
ENSMUSG00000039236	Isg20	94	51.449	ENSXMAG00000013066	isg20	51	52.795	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000175	3'-5'-exoribonuclease activity	-	ISO	Function
GO:0000738	DNA catabolic process, exonucleolytic	-	ISO	Process
GO:0002376	immune system process	-	IEA	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0004518	nuclease activity	-	IEA	Function
GO:0004527	exonuclease activity	-	ISO	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0006364	rRNA processing	-	IEA	Process
GO:0006401	RNA catabolic process	-	ISO	Process
GO:0008310	single-stranded DNA 3'-5' exodeoxyribonuclease activity	-	ISO	Function
GO:0008859	exoribonuclease II activity	-	IEA	Function
GO:0009615	response to virus	-	ISO	Process
GO:0015030	Cajal body	-	ISO	Component
GO:0016605	PML body	-	ISO	Component
GO:0016787	hydrolase activity	-	IEA	Function
GO:0030619	U1 snRNA binding	-	ISO	Function
GO:0030620	U2 snRNA binding	-	ISO	Function
GO:0034511	U3 snoRNA binding	-	ISO	Function
GO:0045071	negative regulation of viral genome replication	-	ISO	Process
GO:0045087	innate immune response	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0051607	defense response to virus	-	ISO	Process