EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000039286 (Gene tree)
Gene ID: 72007
Gene Symbol: Fndc3b
Alias: 1600019O04Rik|fad104
Full Name: fibronectin type III domain containing 3B
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 295146
Position: chr3: 27416162-27711307
Accession: 1919257
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000191684	-	5631	-	-	- (aa)	-	-
ENSMUST00000195008	-	6886	XM_006535543	ENSMUSP00000141620	1207 (aa)	XP_006535606	A0A0R4J0H8
ENSMUST00000193779	-	505	-	ENSMUSP00000141888	119 (aa)	-	A0A0A6YX88
ENSMUST00000046157	-	6875	XM_006535541	ENSMUSP00000041495	1207 (aa)	XP_006535604	A0A0R4J0H8

Gene Model

Click here to download ENSMUSG00000039286's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000039286's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000039286	Fndc3b	100	98.387	ENSG00000075420	FNDC3B	100	92.543	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005783	endoplasmic reticulum	19138685.	IDA	Component
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0016477	cell migration	19138685.	IMP	Process
GO:0034446	substrate adhesion-dependent cell spreading	19138685.	IMP	Process
GO:0045600	positive regulation of fat cell differentiation	15527760.	IDA	Process
GO:0045600	positive regulation of fat cell differentiation	20493170.	IMP	Process
GO:0045668	negative regulation of osteoblast differentiation	20493170.	IMP	Process
GO:0048146	positive regulation of fibroblast proliferation	19138685.	IMP	Process
GO:0060510	type II pneumocyte differentiation	21704616.	IMP	Process