EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000039356 (Gene tree)
Gene ID
227715
Gene Symbol
Exosc2
Alias
Rrp4
Full Name
exosome component 2
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Plus strand
Length
10635 bases
Position
chr2:31670715-31681349
Accession
2385133
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000118770ECR1_NPF14382.66.7e-1511
ENSMUSP00000043519ECR1_NPF14382.68.5e-1511
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
23912277The RNA binding protein repertoire of embryonic stem cellsIC & mESC2013 Aug 4Kwon SCDOI: 10.1038/nsmb.2638
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000125883-518-ENSMUSP0000014140474 (aa)-A0A0A6YW57
ENSMUST00000038474-1686XM_006497944ENSMUSP00000043519293 (aa)XP_006498007Q8VBV3
ENSMUST00000146135-566--- (aa)--
ENSMUST00000192043-496--- (aa)--
ENSMUST00000149094-2076--- (aa)--
ENSMUST00000137156-747-ENSMUSP00000118770247 (aa)-A2AV19
Gene Model
Click here to download ENSMUSG00000039356's gene model file
Pathways
Pathway IDPathway NameSource
mmu03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000039356's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000039356Exosc210094.595ENSG00000130713EXOSC210093.857Homo_sapiens
ENSMUSG00000039356Exosc29673.592ENSAPOG00000008861exosc29776.981Acanthochromis_polyacanthus
ENSMUSG00000039356Exosc210094.595ENSAMEG00000016239EXOSC210093.857Ailuropoda_melanoleuca
ENSMUSG00000039356Exosc210076.451ENSACIG00000019054exosc210076.451Amphilophus_citrinellus
ENSMUSG00000039356Exosc210077.133ENSAOCG00000004983exosc210077.133Amphiprion_ocellaris
ENSMUSG00000039356Exosc210077.133ENSAOCG00000008577exosc210077.133Amphiprion_ocellaris
ENSMUSG00000039356Exosc210077.133ENSAPEG00000014088exosc210077.133Amphiprion_percula
ENSMUSG00000039356Exosc210077.474ENSATEG00000018680exosc210077.474Anabas_testudineus
ENSMUSG00000039356Exosc29689.362ENSAPLG00000012516EXOSC29789.362Anas_platyrhynchos
ENSMUSG00000039356Exosc29984.247ENSACAG00000002706EXOSC29984.247Anolis_carolinensis
ENSMUSG00000039356Exosc210075.768ENSACLG00000013613exosc210075.768Astatotilapia_calliptera
ENSMUSG00000039356Exosc210081.017ENSAMXG00000042605exosc210081.017Astyanax_mexicanus
ENSMUSG00000039356Exosc210097.297ENSBTAG00000048071EXOSC210094.539Bos_taurus
ENSMUSG00000039356Exosc29940.604WBGene00022232exos-29840.604Caenorhabditis_elegans
ENSMUSG00000039356Exosc210094.595ENSCJAG00000020537EXOSC210093.857Callithrix_jacchus
ENSMUSG00000039356Exosc210094.595ENSCAFG00000019941EXOSC29992.808Canis_familiaris
ENSMUSG00000039356Exosc210094.595ENSCAFG00020024047EXOSC210092.833Canis_lupus_dingo
ENSMUSG00000039356Exosc210097.297ENSCHIG00000021398EXOSC210094.881Capra_hircus
ENSMUSG00000039356Exosc210095.946ENSTSYG00000001805EXOSC210094.198Carlito_syrichta
ENSMUSG00000039356Exosc210090.785ENSCPOG00000005902EXOSC210090.785Cavia_porcellus
ENSMUSG00000039356Exosc210094.595ENSCCAG00000019749EXOSC210093.857Cebus_capucinus
ENSMUSG00000039356Exosc210094.595ENSCATG00000025389-10094.198Cercocebus_atys
ENSMUSG00000039356Exosc210095.951ENSCLAG00000006195EXOSC210095.951Chinchilla_lanigera
ENSMUSG00000039356Exosc210094.595ENSCSAG00000014760EXOSC210094.198Chlorocebus_sabaeus
ENSMUSG00000039356Exosc210092.491ENSCHOG00000000858EXOSC210092.491Choloepus_hoffmanni
ENSMUSG00000039356Exosc29986.301ENSCPBG00000022626EXOSC29986.301Chrysemys_picta_bellii
ENSMUSG00000039356Exosc29660.627ENSCING00000014934-9460.627Ciona_intestinalis
ENSMUSG00000039356Exosc210056.410ENSCSAVG00000003684-10063.406Ciona_savignyi
ENSMUSG00000039356Exosc29985.959ENSCANG00000029298-9985.959Colobus_angolensis_palliatus
ENSMUSG00000039356Exosc210094.595ENSCANG00000039828-10094.198Colobus_angolensis_palliatus
ENSMUSG00000039356Exosc210098.649ENSCGRG00001013981Exosc210098.635Cricetulus_griseus_chok1gshd
ENSMUSG00000039356Exosc210098.785ENSCGRG00000017629Exosc210098.785Cricetulus_griseus_crigri
ENSMUSG00000039356Exosc210076.792ENSCSEG00000016539exosc210076.792Cynoglossus_semilaevis
ENSMUSG00000039356Exosc210075.427ENSCVAG00000022260exosc210075.427Cyprinodon_variegatus
ENSMUSG00000039356Exosc210077.966ENSDARG00000028688exosc210077.966Danio_rerio
ENSMUSG00000039356Exosc210093.243ENSDNOG00000025767-10094.382Dasypus_novemcinctus
ENSMUSG00000039356Exosc210094.539ENSDORG00000009238Exosc210094.539Dipodomys_ordii
ENSMUSG00000039356Exosc29357.664FBgn0034879Rrp49258.029Drosophila_melanogaster
ENSMUSG00000039356Exosc29576.173ENSETEG00000016130-10076.173Echinops_telfairi
ENSMUSG00000039356Exosc210095.946ENSEASG00005008475EXOSC28695.222Equus_asinus_asinus
ENSMUSG00000039356Exosc210095.946ENSECAG00000007897EXOSC28695.222Equus_caballus
ENSMUSG00000039356Exosc210077.966ENSELUG00000013641exosc210077.966Esox_lucius
ENSMUSG00000039356Exosc210094.595ENSFCAG00000025936EXOSC210093.515Felis_catus
ENSMUSG00000039356Exosc29884.669ENSFALG00000001446EXOSC29884.669Ficedula_albicollis
ENSMUSG00000039356Exosc210093.927ENSFDAG00000017196EXOSC210093.927Fukomys_damarensis
ENSMUSG00000039356Exosc210076.109ENSFHEG00000018571exosc210076.109Fundulus_heteroclitus
ENSMUSG00000039356Exosc210072.696ENSGMOG00000011785exosc29972.696Gadus_morhua
ENSMUSG00000039356Exosc29987.671ENSGALG00000040373EXOSC29987.671Gallus_gallus
ENSMUSG00000039356Exosc29975.000ENSGAFG00000010283exosc29975.000Gambusia_affinis
ENSMUSG00000039356Exosc210075.768ENSGACG00000016805exosc29977.108Gasterosteus_aculeatus
ENSMUSG00000039356Exosc28789.412ENSGAGG00000021026EXOSC29689.412Gopherus_agassizii
ENSMUSG00000039356Exosc210094.595ENSGGOG00000010578EXOSC210093.174Gorilla_gorilla
ENSMUSG00000039356Exosc210076.451ENSHBUG00000022437exosc210076.451Haplochromis_burtoni
ENSMUSG00000039356Exosc210095.547ENSHGLG00000012834EXOSC210095.547Heterocephalus_glaber_female
ENSMUSG00000039356Exosc210095.547ENSHGLG00100007092EXOSC210095.547Heterocephalus_glaber_male
ENSMUSG00000039356Exosc210075.768ENSHCOG00000019130exosc210075.768Hippocampus_comes
ENSMUSG00000039356Exosc210077.891ENSIPUG00000015397exosc210077.891Ictalurus_punctatus
ENSMUSG00000039356Exosc210095.222ENSSTOG00000005999EXOSC210095.222Ictidomys_tridecemlineatus
ENSMUSG00000039356Exosc210097.297ENSJJAG00000003188Exosc210096.246Jaculus_jaculus
ENSMUSG00000039356Exosc29976.027ENSKMAG00000017397exosc29976.027Kryptolebias_marmoratus
ENSMUSG00000039356Exosc210075.768ENSLBEG00000019269exosc210075.768Labrus_bergylta
ENSMUSG00000039356Exosc210082.653ENSLACG00000015530EXOSC210082.653Latimeria_chalumnae
ENSMUSG00000039356Exosc210093.878ENSLAFG00000006984EXOSC210093.878Loxodonta_africana
ENSMUSG00000039356Exosc210079.863ENSMFAG00000034160-8479.863Macaca_fascicularis
ENSMUSG00000039356Exosc210094.595ENSMFAG00000000597-10094.198Macaca_fascicularis
ENSMUSG00000039356Exosc210093.927ENSMMUG00000012498EXOSC210091.126Macaca_mulatta
ENSMUSG00000039356Exosc210094.595ENSMNEG00000031861-10094.198Macaca_nemestrina
ENSMUSG00000039356Exosc210080.546ENSMNEG00000028704-9180.546Macaca_nemestrina
ENSMUSG00000039356Exosc210094.595ENSMLEG00000042587-10094.198Mandrillus_leucophaeus
ENSMUSG00000039356Exosc210079.522ENSMLEG00000029891-9179.522Mandrillus_leucophaeus
ENSMUSG00000039356Exosc210076.792ENSMAMG00000012466exosc210076.792Mastacembelus_armatus
ENSMUSG00000039356Exosc210075.085ENSMZEG00005018737exosc210075.085Maylandia_zebra
ENSMUSG00000039356Exosc29986.986ENSMGAG00000005450EXOSC29986.986Meleagris_gallopavo
ENSMUSG00000039356Exosc210098.649ENSMAUG00000008299Exosc210098.381Mesocricetus_auratus
ENSMUSG00000039356Exosc210095.946ENSMICG00000015495EXOSC210094.881Microcebus_murinus
ENSMUSG00000039356Exosc210099.190ENSMOCG00000008262Exosc210099.190Microtus_ochrogaster
ENSMUSG00000039356Exosc210077.133ENSMMOG00000009616exosc210077.133Mola_mola
ENSMUSG00000039356Exosc210090.785ENSMODG00000012114EXOSC210090.785Monodelphis_domestica
ENSMUSG00000039356Exosc210077.133ENSMALG00000022132exosc210077.133Monopterus_albus
ENSMUSG00000039356Exosc2100100.000MGP_CAROLIEiJ_G0023415Exosc2100100.000Mus_caroli
ENSMUSG00000039356Exosc2100100.000MGP_PahariEiJ_G0024872Exosc2100100.000Mus_pahari
ENSMUSG00000039356Exosc2100100.000MGP_SPRETEiJ_G0024332Exosc2100100.000Mus_spretus
ENSMUSG00000039356Exosc210094.595ENSMPUG00000012686EXOSC210093.174Mustela_putorius_furo
ENSMUSG00000039356Exosc210093.898ENSMLUG00000008776EXOSC210093.898Myotis_lucifugus
ENSMUSG00000039356Exosc210095.951ENSNGAG00000019383Exosc210095.951Nannospalax_galili
ENSMUSG00000039356Exosc210076.109ENSNBRG00000005453exosc210076.109Neolamprologus_brichardi
ENSMUSG00000039356Exosc210094.595ENSNLEG00000012533EXOSC210093.857Nomascus_leucogenys
ENSMUSG00000039356Exosc210070.307ENSMEUG00000000795EXOSC210070.307Notamacropus_eugenii
ENSMUSG00000039356Exosc210093.243ENSOPRG00000008688EXOSC26596.970Ochotona_princeps
ENSMUSG00000039356Exosc210092.833ENSODEG00000016880-10092.833Octodon_degus
ENSMUSG00000039356Exosc28794.094ENSODEG00000019513-10094.094Octodon_degus
ENSMUSG00000039356Exosc210076.109ENSONIG00000014086exosc210076.109Oreochromis_niloticus
ENSMUSG00000039356Exosc210085.324ENSOANG00000001044EXOSC210085.324Ornithorhynchus_anatinus
ENSMUSG00000039356Exosc210093.515ENSOCUG00000007138EXOSC210093.515Oryctolagus_cuniculus
ENSMUSG00000039356Exosc210076.792ENSORLG00000007443exosc210076.792Oryzias_latipes
ENSMUSG00000039356Exosc210076.792ENSORLG00020018902exosc210076.792Oryzias_latipes_hni
ENSMUSG00000039356Exosc210077.133ENSORLG00015006767exosc210077.133Oryzias_latipes_hsok
ENSMUSG00000039356Exosc210075.768ENSOMEG00000003533exosc210075.768Oryzias_melastigma
ENSMUSG00000039356Exosc210094.539ENSOGAG00000007558EXOSC210094.539Otolemur_garnettii
ENSMUSG00000039356Exosc210094.737ENSOARG00000007438EXOSC210093.898Ovis_aries
ENSMUSG00000039356Exosc210094.595ENSPPAG00000034796EXOSC210093.857Pan_paniscus
ENSMUSG00000039356Exosc210094.595ENSPPRG00000001089EXOSC210093.857Panthera_pardus
ENSMUSG00000039356Exosc210094.595ENSPTIG00000021163EXOSC210093.857Panthera_tigris_altaica
ENSMUSG00000039356Exosc210094.595ENSPTRG00000045766-10093.857Pan_troglodytes
ENSMUSG00000039356Exosc210094.595ENSPTRG00000021476EXOSC210093.857Pan_troglodytes
ENSMUSG00000039356Exosc210094.595ENSPANG00000025966EXOSC210094.198Papio_anubis
ENSMUSG00000039356Exosc29977.855ENSPKIG00000004271exosc29877.855Paramormyrops_kingsleyae
ENSMUSG00000039356Exosc29987.329ENSPSIG00000006743EXOSC29987.329Pelodiscus_sinensis
ENSMUSG00000039356Exosc28678.261ENSPMGG00000010980exosc29978.261Periophthalmus_magnuspinnatus
ENSMUSG00000039356Exosc210098.649ENSPEMG00000006345Exosc210098.294Peromyscus_maniculatus_bairdii
ENSMUSG00000039356Exosc210076.271ENSPMAG00000001280exosc210076.271Petromyzon_marinus
ENSMUSG00000039356Exosc210090.785ENSPCIG00000024122EXOSC29790.785Phascolarctos_cinereus
ENSMUSG00000039356Exosc29975.427ENSPFOG00000019819exosc29975.427Poecilia_formosa
ENSMUSG00000039356Exosc29975.685ENSPLAG00000004605exosc29975.685Poecilia_latipinna
ENSMUSG00000039356Exosc29975.685ENSPMEG00000010976exosc29975.685Poecilia_mexicana
ENSMUSG00000039356Exosc29975.342ENSPREG00000014306exosc29975.342Poecilia_reticulata
ENSMUSG00000039356Exosc210094.595ENSPPYG00000019695EXOSC210093.515Pongo_abelii
ENSMUSG00000039356Exosc210094.198ENSPCAG00000013400EXOSC210094.198Procavia_capensis
ENSMUSG00000039356Exosc210094.332ENSPCOG00000017639EXOSC210094.198Propithecus_coquereli
ENSMUSG00000039356Exosc210094.595ENSPVAG00000001513EXOSC210092.833Pteropus_vampyrus
ENSMUSG00000039356Exosc210076.451ENSPNYG00000007383exosc210076.451Pundamilia_nyererei
ENSMUSG00000039356Exosc210078.912ENSPNAG00000014281exosc210078.912Pygocentrus_nattereri
ENSMUSG00000039356Exosc210098.649ENSRNOG00000009245Exosc210097.270Rattus_norvegicus
ENSMUSG00000039356Exosc29986.644ENSRBIG00000029791-9986.644Rhinopithecus_bieti
ENSMUSG00000039356Exosc210094.595ENSRBIG00000031203-10093.857Rhinopithecus_bieti
ENSMUSG00000039356Exosc29984.932ENSRROG00000043609-9984.932Rhinopithecus_roxellana
ENSMUSG00000039356Exosc210094.595ENSRROG00000010827-10093.857Rhinopithecus_roxellana
ENSMUSG00000039356Exosc28940.541YHR069C-8240.541Saccharomyces_cerevisiae
ENSMUSG00000039356Exosc210093.522ENSSBOG00000022712EXOSC210093.515Saimiri_boliviensis_boliviensis
ENSMUSG00000039356Exosc210090.444ENSSHAG00000016050EXOSC210090.444Sarcophilus_harrisii
ENSMUSG00000039356Exosc210077.133ENSSFOG00015011245exosc210077.133Scleropages_formosus
ENSMUSG00000039356Exosc210075.768ENSSMAG00000003112exosc210075.768Scophthalmus_maximus
ENSMUSG00000039356Exosc210075.676ENSSDUG00000004634exosc210075.676Seriola_dumerili
ENSMUSG00000039356Exosc210076.451ENSSLDG00000010616exosc210076.451Seriola_lalandi_dorsalis
ENSMUSG00000039356Exosc29985.763ENSSPUG00000013391EXOSC29985.763Sphenodon_punctatus
ENSMUSG00000039356Exosc210076.451ENSSPAG00000022947exosc210076.451Stegastes_partitus
ENSMUSG00000039356Exosc210094.595ENSSSCG00000005704EXOSC210094.539Sus_scrofa
ENSMUSG00000039356Exosc29983.904ENSTGUG00000004697EXOSC29983.904Taeniopygia_guttata
ENSMUSG00000039356Exosc210072.696ENSTRUG00000022436exosc210072.696Takifugu_rubripes
ENSMUSG00000039356Exosc210093.243ENSTTRG00000015159EXOSC210086.348Tursiops_truncatus
ENSMUSG00000039356Exosc210093.243ENSUAMG00000009651EXOSC29992.058Ursus_americanus
ENSMUSG00000039356Exosc210093.515ENSUMAG00000018726EXOSC210093.515Ursus_maritimus
ENSMUSG00000039356Exosc210094.595ENSVVUG00000027665EXOSC210092.833Vulpes_vulpes
ENSMUSG00000039356Exosc210079.181ENSXETG00000001340exosc210079.181Xenopus_tropicalis
ENSMUSG00000039356Exosc29975.685ENSXMAG00000005265exosc29975.685Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000176nuclear exosome (RNase complex)21873635.IBAComponent
GO:0000176nuclear exosome (RNase complex)-ISOComponent
GO:0000177cytoplasmic exosome (RNase complex)21873635.IBAComponent
GO:0000178exosome (RNase complex)21873635.IBAComponent
GO:0000178exosome (RNase complex)-ISOComponent
GO:0000467exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)21873635.IBAProcess
GO:0003723RNA binding21873635.IBAFunction
GO:0005634nucleus-ISOComponent
GO:0005730nucleolus-ISOComponent
GO:0005737cytoplasm-ISOComponent
GO:0006364rRNA processing-IEAProcess
GO:0030307positive regulation of cell growth-ISOProcess
GO:0034427nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'21873635.IBAProcess
GO:0034475U4 snRNA 3'-end processing21873635.IBAProcess
GO:0043928exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay21873635.IBAProcess
GO:0071034CUT catabolic process21873635.IBAProcess
GO:0071035nuclear polyadenylation-dependent rRNA catabolic process21873635.IBAProcess
GO:0071038nuclear polyadenylation-dependent tRNA catabolic process21873635.IBAProcess
GO:0071049nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription21873635.IBAProcess
GO:0071051polyadenylation-dependent snoRNA 3'-end processing21873635.IBAProcess

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