EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000039361 (Gene tree)
Gene ID: 233489
Gene Symbol: Picalm
Alias: fit-1|fit1
Full Name: phosphatidylinositol binding clathrin assembly protein
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 83253
Position: chr7: 90130213-90213465
Accession: 2385902
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000208127	-	574	-	-	- (aa)	-	-
ENSMUST00000208684	-	334	-	ENSMUSP00000146408	85 (aa)	-	A0A140LHG9
ENSMUST00000209068	-	3511	XM_006507602	ENSMUSP00000146386	610 (aa)	XP_006507665	Q7M6Y3
ENSMUST00000208891	-	763	-	-	- (aa)	-	-
ENSMUST00000207197	-	3807	-	-	- (aa)	-	-
ENSMUST00000207484	-	8209	XM_006507594	ENSMUSP00000146501	660 (aa)	XP_006507657	Q7M6Y3
ENSMUST00000208742	-	3361	XM_006507597	ENSMUSP00000147016	652 (aa)	XP_006507660	Q7M6Y3
ENSMUST00000207084	-	2929	-	ENSMUSP00000146509	531 (aa)	-	A0A140LHQ8
ENSMUST00000207106	-	1873	-	-	- (aa)	-	-
ENSMUST00000207596	-	1858	-	-	- (aa)	-	-
ENSMUST00000207225	-	3489	XM_006507604	ENSMUSP00000146659	597 (aa)	XP_006507667	Q7M6Y3
ENSMUST00000049537	-	3528	XM_006507595	ENSMUSP00000051092	655 (aa)	XP_006507658	Q7M6Y3
ENSMUST00000207949	-	700	-	-	- (aa)	-	-
ENSMUST00000208089	-	2743	-	ENSMUSP00000150861	404 (aa)	-	A0A1L1SUR7
ENSMUST00000208730	-	3427	XM_006507603	ENSMUSP00000146541	605 (aa)	XP_006507666	Q7M6Y3

Gene Model

Click here to download ENSMUSG00000039361's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000039361's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000149	SNARE binding	21873635.	IBA	Function
GO:0000149	SNARE binding	-	ISO	Function
GO:0005543	phospholipid binding	-	IEA	Function
GO:0005545	1-phosphatidylinositol binding	21873635.	IBA	Function
GO:0005545	1-phosphatidylinositol binding	-	ISO	Function
GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	21873635.	IBA	Function
GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	-	ISO	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005768	endosome	-	ISO	Component
GO:0005769	early endosome	-	ISO	Component
GO:0005794	Golgi apparatus	-	IEA	Component
GO:0005886	plasma membrane	21873635.	IBA	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0005905	clathrin-coated pit	21873635.	IBA	Component
GO:0005905	clathrin-coated pit	12832620.	IDA	Component
GO:0005905	clathrin-coated pit	-	ISO	Component
GO:0006897	endocytosis	21873635.	IBA	Process
GO:0006897	endocytosis	-	ISO	Process
GO:0006898	receptor-mediated endocytosis	12832620.	IDA	Process
GO:0006898	receptor-mediated endocytosis	-	ISO	Process
GO:0006900	vesicle budding from membrane	21873635.	IBA	Process
GO:0006900	vesicle budding from membrane	-	ISO	Process
GO:0007275	multicellular organism development	-	IEA	Process
GO:0007409	axonogenesis	18842885.	IMP	Process
GO:0007409	axonogenesis	-	ISO	Process
GO:0007611	learning or memory	26005850.	IGI	Process
GO:0008021	synaptic vesicle	21873635.	IBA	Component
GO:0008021	synaptic vesicle	-	ISO	Component
GO:0009986	cell surface	-	ISO	Component
GO:0010629	negative regulation of gene expression	-	ISO	Process
GO:0014069	postsynaptic density	-	ISO	Component
GO:0016020	membrane	-	IEA	Component
GO:0016185	synaptic vesicle budding from presynaptic endocytic zone membrane	21873635.	IBA	Process
GO:0016188	synaptic vesicle maturation	22851330.	IMP	Process
GO:0016192	vesicle-mediated transport	-	ISO	Process
GO:0016197	endosomal transport	-	ISO	Process
GO:0017124	SH3 domain binding	-	ISO	Function
GO:0017137	Rab GTPase binding	-	ISO	Function
GO:0030097	hemopoiesis	12832620.	IMP	Process
GO:0030100	regulation of endocytosis	-	ISO	Process
GO:0030122	AP-2 adaptor complex	-	ISO	Component
GO:0030132	clathrin coat of coated pit	-	ISO	Component
GO:0030136	clathrin-coated vesicle	21873635.	IBA	Component
GO:0030136	clathrin-coated vesicle	-	ISO	Component
GO:0030276	clathrin binding	-	ISO	Function
GO:0031224	intrinsic component of membrane	-	ISO	Component
GO:0031410	cytoplasmic vesicle	-	IEA	Component
GO:0031623	receptor internalization	-	ISO	Process
GO:0031982	vesicle	22539346.	IDA	Component
GO:0032050	clathrin heavy chain binding	21873635.	IBA	Function
GO:0032050	clathrin heavy chain binding	-	ISO	Function
GO:0032880	regulation of protein localization	-	ISO	Process
GO:0035459	cargo loading into vesicle	22539346.	IMP	Process
GO:0035459	cargo loading into vesicle	-	ISO	Process
GO:0042734	presynaptic membrane	21873635.	IBA	Component
GO:0042734	presynaptic membrane	-	ISO	Component
GO:0042802	identical protein binding	-	ISO	Function
GO:0043005	neuron projection	-	ISO	Component
GO:0043025	neuronal cell body	-	ISO	Component
GO:0043231	intracellular membrane-bounded organelle	-	ISO	Component
GO:0043547	positive regulation of GTPase activity	-	ISO	Process
GO:0045202	synapse	-	ISO	Component
GO:0045211	postsynaptic membrane	-	ISO	Component
GO:0045893	positive regulation of transcription, DNA-templated	-	ISO	Process
GO:0048156	tau protein binding	-	ISO	Function
GO:0048261	negative regulation of receptor-mediated endocytosis	-	ISO	Process
GO:0048268	clathrin coat assembly	-	ISO	Process
GO:0048471	perinuclear region of cytoplasm	18182011.	IDA	Component
GO:0048488	synaptic vesicle endocytosis	21873635.	IBA	Process
GO:0048488	synaptic vesicle endocytosis	-	ISO	Process
GO:0048813	dendrite morphogenesis	18842885.	IMP	Process
GO:0048813	dendrite morphogenesis	-	ISO	Process
GO:0050750	low-density lipoprotein particle receptor binding	-	ISO	Function
GO:0050772	positive regulation of axonogenesis	-	ISO	Process
GO:0051223	regulation of protein transport	-	ISO	Process
GO:0055072	iron ion homeostasis	-	ISO	Process
GO:0070381	endosome to plasma membrane transport vesicle	-	ISO	Component
GO:0072583	clathrin-dependent endocytosis	21873635.	IBA	Process
GO:0072583	clathrin-dependent endocytosis	22539346.	IMP	Process
GO:0072583	clathrin-dependent endocytosis	-	ISO	Process
GO:0090647	modulation of age-related behavioral decline	26005850.	IGI	Process
GO:0097418	neurofibrillary tangle	-	ISO	Component
GO:0097494	regulation of vesicle size	-	ISO	Process
GO:0097753	membrane bending	-	ISO	Process
GO:0098685	Schaffer collateral - CA1 synapse	-	ISO	Component
GO:0098688	parallel fiber to Purkinje cell synapse	-	ISO	Component
GO:0098711	iron ion import across plasma membrane	21873635.	IBA	Process
GO:0098794	postsynapse	-	ISO	Component
GO:0098894	extrinsic component of presynaptic endocytic zone membrane	21873635.	IBA	Component
GO:0098894	extrinsic component of presynaptic endocytic zone membrane	-	ISO	Component
GO:0150093	amyloid-beta clearance by transcytosis	26005850.	IGI	Process
GO:0150093	amyloid-beta clearance by transcytosis	26005850.	IMP	Process
GO:0150093	amyloid-beta clearance by transcytosis	-	ISO	Process
GO:1900242	regulation of synaptic vesicle endocytosis	-	ISO	Process
GO:1900244	positive regulation of synaptic vesicle endocytosis	-	ISO	Process
GO:1901216	positive regulation of neuron death	-	ISO	Process
GO:1902003	regulation of amyloid-beta formation	26005850.	IGI	Process
GO:1902004	positive regulation of amyloid-beta formation	22539346.24577224.	IMP	Process
GO:1902004	positive regulation of amyloid-beta formation	-	ISO	Process
GO:1902803	regulation of synaptic vesicle transport	-	ISO	Process
GO:1902959	regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process	-	ISO	Process
GO:1902961	positive regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process	22539346.	IMP	Process
GO:1902963	negative regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process	22539346.	IMP	Process
GO:1903077	negative regulation of protein localization to plasma membrane	-	ISO	Process
GO:1903861	positive regulation of dendrite extension	-	ISO	Process
GO:1905224	clathrin-coated pit assembly	-	ISO	Process
GO:2000009	negative regulation of protein localization to cell surface	-	ISO	Process
GO:2000331	regulation of terminal button organization	-	ISO	Process
GO:2000809	positive regulation of synaptic vesicle clustering	-	ISO	Process