EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000039620 (Gene tree)
Gene ID: 319582
Gene Symbol: Trmt9b
Alias: 6430573F11Rik
Full Name: tRNA methyltransferase 9B
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 59023 bases
Position: chr8:36457548-36516570
Accession: 2442328
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000119912	Methyltransf_31	PF13847.6	1.1e-09	1	1
ENSMUSP00000127875	Methyltransf_31	PF13847.6	1.1e-09	1	1
ENSMUSP00000119912	Methyltransf_8	PF05148.15	1.8e-05	1	1
ENSMUSP00000127875	Methyltransf_8	PF05148.15	1.8e-05	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000135373	-	2573	-	ENSMUSP00000120524	126 (aa)	-	D3YYA2
ENSMUST00000152039	-	889	-	ENSMUSP00000119288	110 (aa)	-	Q80WQ4
ENSMUST00000125492	-	1258	-	-	- (aa)	-	-
ENSMUST00000171777	-	1825	-	ENSMUSP00000127875	447 (aa)	-	Q80WQ4
ENSMUST00000147525	-	5820	XM_006509133	ENSMUSP00000119912	447 (aa)	XP_006509196	Q80WQ4

Gene Model

Click here to download ENSMUSG00000039620's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000039620's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000039620	Trmt9b	100	73.568	ENSG00000250305	TRMT9B	100	83.333	Homo_sapiens
ENSMUSG00000039620	Trmt9b	99	71.302	ENSAMEG00000007166	TRMT9B	99	71.082	Ailuropoda_melanoleuca
ENSMUSG00000039620	Trmt9b	99	56.087	ENSAPLG00000009756	TRMT9B	99	56.087	Anas_platyrhynchos
ENSMUSG00000039620	Trmt9b	100	73.348	ENSANAG00000021322	TRMT9B	100	73.348	Aotus_nancymaae
ENSMUSG00000039620	Trmt9b	100	68.433	ENSBTAG00000008950	TRMT9B	100	68.212	Bos_taurus
ENSMUSG00000039620	Trmt9b	100	73.348	ENSCJAG00000012066	TRMT9B	100	73.128	Callithrix_jacchus
ENSMUSG00000039620	Trmt9b	100	70.705	ENSCAFG00000006759	TRMT9B	100	70.485	Canis_familiaris
ENSMUSG00000039620	Trmt9b	100	69.536	ENSCHIG00000025183	TRMT9B	100	69.027	Capra_hircus
ENSMUSG00000039620	Trmt9b	100	72.687	ENSTSYG00000029308	TRMT9B	100	72.467	Carlito_syrichta
ENSMUSG00000039620	Trmt9b	99	67.920	ENSCPOG00000032099	TRMT9B	99	67.920	Cavia_porcellus
ENSMUSG00000039620	Trmt9b	100	73.128	ENSCCAG00000032783	TRMT9B	100	73.128	Cebus_capucinus
ENSMUSG00000039620	Trmt9b	100	73.348	ENSCATG00000037514	TRMT9B	100	73.348	Cercocebus_atys
ENSMUSG00000039620	Trmt9b	99	69.731	ENSCLAG00000000634	TRMT9B	99	69.507	Chinchilla_lanigera
ENSMUSG00000039620	Trmt9b	100	72.907	ENSCSAG00000016833	TRMT9B	100	72.907	Chlorocebus_sabaeus
ENSMUSG00000039620	Trmt9b	99	59.031	ENSCPBG00000025129	TRMT9B	97	59.031	Chrysemys_picta_bellii
ENSMUSG00000039620	Trmt9b	88	72.139	ENSCANG00000025271	TRMT9B	100	72.139	Colobus_angolensis_palliatus
ENSMUSG00000039620	Trmt9b	100	85.906	ENSCGRG00001019764	Trmt9b	100	85.906	Cricetulus_griseus_chok1gshd
ENSMUSG00000039620	Trmt9b	100	85.906	ENSCGRG00000012855	Trmt9b	100	85.906	Cricetulus_griseus_crigri
ENSMUSG00000039620	Trmt9b	100	64.758	ENSDNOG00000000297	TRMT9B	100	64.758	Dasypus_novemcinctus
ENSMUSG00000039620	Trmt9b	100	71.145	ENSEASG00005017014	TRMT9B	100	71.145	Equus_asinus_asinus
ENSMUSG00000039620	Trmt9b	100	70.640	ENSECAG00000013811	TRMT9B	100	70.640	Equus_caballus
ENSMUSG00000039620	Trmt9b	100	70.925	ENSFCAG00000041381	TRMT9B	100	70.705	Felis_catus
ENSMUSG00000039620	Trmt9b	99	55.677	ENSFALG00000003704	TRMT9B	98	55.677	Ficedula_albicollis
ENSMUSG00000039620	Trmt9b	99	69.556	ENSFDAG00000020217	TRMT9B	99	69.556	Fukomys_damarensis
ENSMUSG00000039620	Trmt9b	99	57.205	ENSGALG00000042726	TRMT9B	99	57.205	Gallus_gallus
ENSMUSG00000039620	Trmt9b	99	57.018	ENSGAGG00000006042	TRMT9B	99	57.018	Gopherus_agassizii
ENSMUSG00000039620	Trmt9b	100	74.009	ENSGGOG00000037983	TRMT9B	100	74.009	Gorilla_gorilla
ENSMUSG00000039620	Trmt9b	99	72.000	ENSHGLG00000004927	TRMT9B	99	71.556	Heterocephalus_glaber_female
ENSMUSG00000039620	Trmt9b	99	72.000	ENSHGLG00100001579	TRMT9B	99	71.556	Heterocephalus_glaber_male
ENSMUSG00000039620	Trmt9b	99	55.217	ENSLACG00000009737	TRMT9B	99	54.348	Latimeria_chalumnae
ENSMUSG00000039620	Trmt9b	100	73.128	ENSMFAG00000043419	TRMT9B	100	73.128	Macaca_fascicularis
ENSMUSG00000039620	Trmt9b	100	73.128	ENSMMUG00000043856	TRMT9B	100	73.128	Macaca_mulatta
ENSMUSG00000039620	Trmt9b	100	73.128	ENSMNEG00000037430	TRMT9B	100	73.128	Macaca_nemestrina
ENSMUSG00000039620	Trmt9b	100	72.907	ENSMLEG00000037379	TRMT9B	100	72.907	Mandrillus_leucophaeus
ENSMUSG00000039620	Trmt9b	99	57.205	ENSMGAG00000011654	TRMT9B	99	57.205	Meleagris_gallopavo
ENSMUSG00000039620	Trmt9b	100	82.998	ENSMAUG00000017514	Trmt9b	100	82.998	Mesocricetus_auratus
ENSMUSG00000039620	Trmt9b	99	70.354	ENSMICG00000012942	TRMT9B	99	70.133	Microcebus_murinus
ENSMUSG00000039620	Trmt9b	99	84.045	ENSMOCG00000013997	Trmt9b	100	84.045	Microtus_ochrogaster
ENSMUSG00000039620	Trmt9b	100	97.315	MGP_CAROLIEiJ_G0030985	Trmt9b	100	97.315	Mus_caroli
ENSMUSG00000039620	Trmt9b	100	93.289	MGP_PahariEiJ_G0021453	Trmt9b	100	93.289	Mus_pahari
ENSMUSG00000039620	Trmt9b	100	98.658	MGP_SPRETEiJ_G0032101	Trmt9b	100	98.658	Mus_spretus
ENSMUSG00000039620	Trmt9b	100	69.757	ENSMPUG00000011528	TRMT9B	100	69.757	Mustela_putorius_furo
ENSMUSG00000039620	Trmt9b	100	70.485	ENSMLUG00000013029	TRMT9B	100	70.485	Myotis_lucifugus
ENSMUSG00000039620	Trmt9b	100	73.789	ENSNLEG00000031644	TRMT9B	100	73.789	Nomascus_leucogenys
ENSMUSG00000039620	Trmt9b	99	70.222	ENSODEG00000004422	TRMT9B	99	70.222	Octodon_degus
ENSMUSG00000039620	Trmt9b	57	59.846	ENSOANG00000002169	-	96	52.160	Ornithorhynchus_anatinus
ENSMUSG00000039620	Trmt9b	100	67.912	ENSOCUG00000024898	TRMT9B	100	67.912	Oryctolagus_cuniculus
ENSMUSG00000039620	Trmt9b	99	67.699	ENSOGAG00000012709	TRMT9B	99	67.699	Otolemur_garnettii
ENSMUSG00000039620	Trmt9b	99	70.510	ENSOARG00000009832	TRMT9B	99	69.778	Ovis_aries
ENSMUSG00000039620	Trmt9b	100	73.568	ENSPPAG00000030027	TRMT9B	100	73.568	Pan_paniscus
ENSMUSG00000039620	Trmt9b	100	71.145	ENSPPRG00000012143	TRMT9B	100	71.145	Panthera_pardus
ENSMUSG00000039620	Trmt9b	100	71.145	ENSPTIG00000001444	TRMT9B	100	71.145	Panthera_tigris_altaica
ENSMUSG00000039620	Trmt9b	100	74.009	ENSPTRG00000041473	TRMT9B	100	74.009	Pan_troglodytes
ENSMUSG00000039620	Trmt9b	100	73.128	ENSPANG00000008717	TRMT9B	100	73.128	Papio_anubis
ENSMUSG00000039620	Trmt9b	99	83.596	ENSPEMG00000021287	Trmt9b	100	83.596	Peromyscus_maniculatus_bairdii
ENSMUSG00000039620	Trmt9b	100	71.209	ENSPCOG00000020130	TRMT9B	100	70.989	Propithecus_coquereli
ENSMUSG00000039620	Trmt9b	100	89.262	ENSRNOG00000011253	Trmt9b	100	89.262	Rattus_norvegicus
ENSMUSG00000039620	Trmt9b	100	73.348	ENSRBIG00000040588	TRMT9B	100	73.348	Rhinopithecus_bieti
ENSMUSG00000039620	Trmt9b	100	72.907	ENSRROG00000005726	TRMT9B	100	72.907	Rhinopithecus_roxellana
ENSMUSG00000039620	Trmt9b	100	72.907	ENSSBOG00000029215	TRMT9B	100	72.687	Saimiri_boliviensis_boliviensis
ENSMUSG00000039620	Trmt9b	98	51.570	ENSSHAG00000001652	TRMT9B	98	51.570	Sarcophilus_harrisii
ENSMUSG00000039620	Trmt9b	100	69.824	ENSSSCG00000006969	TRMT9B	100	69.604	Sus_scrofa
ENSMUSG00000039620	Trmt9b	99	55.022	ENSTGUG00000007372	TRMT9B	99	55.022	Taeniopygia_guttata
ENSMUSG00000039620	Trmt9b	100	70.925	ENSUMAG00000020549	TRMT9B	100	70.705	Ursus_maritimus
ENSMUSG00000039620	Trmt9b	100	69.824	ENSVVUG00000019651	TRMT9B	100	69.604	Vulpes_vulpes
ENSMUSG00000039620	Trmt9b	99	52.203	ENSXETG00000005622	kiaa1456l	99	51.982	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	21873635.	IBA	Function
GO:0002098	tRNA wobble uridine modification	21873635.	IBA	Process
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0008033	tRNA processing	-	IEA	Process
GO:0008168	methyltransferase activity	-	IEA	Function
GO:0008175	tRNA methyltransferase activity	-	ISO	Function
GO:0016300	tRNA (uracil) methyltransferase activity	21873635.	IBA	Function
GO:0016706	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	21873635.	IBA	Function
GO:0016740	transferase activity	-	IEA	Function
GO:0032259	methylation	-	IEA	Process