EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000039640 (Gene tree)
Gene ID: 56282
Gene Symbol: Mrpl12
Alias: 0610034O11Rik|1500031N16Rik|MRP-L12|Rpml12
Full Name: mitochondrial ribosomal protein L12
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 4453 bases
Position: chr11:120484613-120489065
Accession: 1926273
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000044417	Ribosomal_L12	PF00542.19	1.6e-17	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000043627	-	1316	-	ENSMUSP00000044417	201 (aa)	-	Q9DB15
ENSMUST00000137619	-	768	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000039640's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000039640's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000039640	Mrpl12	100	83.582	ENSG00000262814	MRPL12	100	84.080	Homo_sapiens
ENSMUSG00000039640	Mrpl12	97	68.687	ENSAPOG00000005018	mrpl12	97	68.687	Acanthochromis_polyacanthus
ENSMUSG00000039640	Mrpl12	97	63.636	ENSACIG00000006182	mrpl12	97	62.871	Amphilophus_citrinellus
ENSMUSG00000039640	Mrpl12	97	65.657	ENSAOCG00000003859	mrpl12	97	64.677	Amphiprion_ocellaris
ENSMUSG00000039640	Mrpl12	97	65.657	ENSAPEG00000005897	mrpl12	97	64.677	Amphiprion_percula
ENSMUSG00000039640	Mrpl12	97	62.944	ENSATEG00000023948	mrpl12	97	62.121	Anabas_testudineus
ENSMUSG00000039640	Mrpl12	87	69.714	ENSACAG00000010743	MRPL12	83	67.196	Anolis_carolinensis
ENSMUSG00000039640	Mrpl12	100	83.085	ENSANAG00000037237	-	100	82.587	Aotus_nancymaae
ENSMUSG00000039640	Mrpl12	100	82.090	ENSANAG00000020985	-	100	80.100	Aotus_nancymaae
ENSMUSG00000039640	Mrpl12	99	64.851	ENSACLG00000022963	mrpl12	98	62.000	Astatotilapia_calliptera
ENSMUSG00000039640	Mrpl12	86	68.605	ENSAMXG00000032543	mrpl12	87	69.186	Astyanax_mexicanus
ENSMUSG00000039640	Mrpl12	100	87.562	ENSBTAG00000000417	MRPL12	100	87.562	Bos_taurus
ENSMUSG00000039640	Mrpl12	82	41.860	WBGene00012361	mrpl-12	80	42.177	Caenorhabditis_elegans
ENSMUSG00000039640	Mrpl12	100	85.075	ENSCJAG00000001652	MRPL12	100	83.085	Callithrix_jacchus
ENSMUSG00000039640	Mrpl12	100	88.060	ENSCHIG00000027210	MRPL12	100	88.060	Capra_hircus
ENSMUSG00000039640	Mrpl12	100	84.080	ENSTSYG00000009746	MRPL12	100	84.577	Carlito_syrichta
ENSMUSG00000039640	Mrpl12	100	90.050	ENSCPOG00000035389	MRPL12	100	89.552	Cavia_porcellus
ENSMUSG00000039640	Mrpl12	100	85.572	ENSCCAG00000026887	MRPL12	100	83.582	Cebus_capucinus
ENSMUSG00000039640	Mrpl12	100	86.567	ENSCATG00000045041	MRPL12	100	84.577	Cercocebus_atys
ENSMUSG00000039640	Mrpl12	100	89.552	ENSCLAG00000012764	MRPL12	100	89.055	Chinchilla_lanigera
ENSMUSG00000039640	Mrpl12	100	84.080	ENSCSAG00000002234	MRPL12	100	83.582	Chlorocebus_sabaeus
ENSMUSG00000039640	Mrpl12	87	74.286	ENSCPBG00000011476	MRPL12	100	71.782	Chrysemys_picta_bellii
ENSMUSG00000039640	Mrpl12	72	45.833	ENSCING00000012945	-	73	49.306	Ciona_intestinalis
ENSMUSG00000039640	Mrpl12	100	84.080	ENSCANG00000029130	MRPL12	100	84.577	Colobus_angolensis_palliatus
ENSMUSG00000039640	Mrpl12	96	91.192	ENSCGRG00001005393	Mrpl12	100	90.196	Cricetulus_griseus_chok1gshd
ENSMUSG00000039640	Mrpl12	96	88.601	ENSCGRG00000015907	Mrpl12	100	87.745	Cricetulus_griseus_crigri
ENSMUSG00000039640	Mrpl12	100	61.951	ENSCSEG00000009238	mrpl12	99	62.871	Cynoglossus_semilaevis
ENSMUSG00000039640	Mrpl12	98	63.500	ENSCVAG00000008710	mrpl12	98	63.636	Cyprinodon_variegatus
ENSMUSG00000039640	Mrpl12	94	63.351	ENSDARG00000038768	mrpl12	95	62.827	Danio_rerio
ENSMUSG00000039640	Mrpl12	100	84.080	ENSDNOG00000042484	MRPL12	100	84.080	Dasypus_novemcinctus
ENSMUSG00000039640	Mrpl12	100	87.562	ENSDORG00000008074	Mrpl12	100	86.567	Dipodomys_ordii
ENSMUSG00000039640	Mrpl12	69	41.727	FBgn0011787	mRpL12	98	35.638	Drosophila_melanogaster
ENSMUSG00000039640	Mrpl12	100	85.075	ENSEASG00005005780	MRPL12	100	86.070	Equus_asinus_asinus
ENSMUSG00000039640	Mrpl12	100	85.075	ENSECAG00000009323	MRPL12	100	86.070	Equus_caballus
ENSMUSG00000039640	Mrpl12	100	76.119	ENSEEUG00000015613	MRPL12	100	76.119	Erinaceus_europaeus
ENSMUSG00000039640	Mrpl12	96	63.131	ENSELUG00000010073	mrpl12	96	63.684	Esox_lucius
ENSMUSG00000039640	Mrpl12	87	88.000	ENSFDAG00000014977	MRPL12	100	87.429	Fukomys_damarensis
ENSMUSG00000039640	Mrpl12	97	64.796	ENSFHEG00000014518	mrpl12	99	63.265	Fundulus_heteroclitus
ENSMUSG00000039640	Mrpl12	96	61.500	ENSGMOG00000008213	mrpl12	98	58.706	Gadus_morhua
ENSMUSG00000039640	Mrpl12	89	67.582	ENSGALG00000045753	MRPL12	87	69.822	Gallus_gallus
ENSMUSG00000039640	Mrpl12	99	63.768	ENSGAFG00000003529	mrpl12	95	63.768	Gambusia_affinis
ENSMUSG00000039640	Mrpl12	100	60.199	ENSGACG00000010541	mrpl12	100	57.711	Gasterosteus_aculeatus
ENSMUSG00000039640	Mrpl12	100	75.248	ENSGAGG00000013180	MRPL12	100	74.752	Gopherus_agassizii
ENSMUSG00000039640	Mrpl12	100	84.577	ENSGGOG00000009356	MRPL12	100	84.080	Gorilla_gorilla
ENSMUSG00000039640	Mrpl12	99	62.121	ENSHBUG00000004986	mrpl12	97	63.077	Haplochromis_burtoni
ENSMUSG00000039640	Mrpl12	100	85.572	ENSHGLG00000009470	MRPL12	99	86.070	Heterocephalus_glaber_female
ENSMUSG00000039640	Mrpl12	89	88.202	ENSHGLG00100005034	MRPL12	94	87.895	Heterocephalus_glaber_male
ENSMUSG00000039640	Mrpl12	97	65.816	ENSHCOG00000018775	mrpl12	97	64.179	Hippocampus_comes
ENSMUSG00000039640	Mrpl12	96	65.464	ENSIPUG00000007392	Mrpl12	96	65.263	Ictalurus_punctatus
ENSMUSG00000039640	Mrpl12	100	88.557	ENSSTOG00000031761	MRPL12	100	88.557	Ictidomys_tridecemlineatus
ENSMUSG00000039640	Mrpl12	100	88.670	ENSJJAG00000018729	Mrpl12	100	86.700	Jaculus_jaculus
ENSMUSG00000039640	Mrpl12	97	63.131	ENSKMAG00000012978	mrpl12	97	62.626	Kryptolebias_marmoratus
ENSMUSG00000039640	Mrpl12	98	62.000	ENSLBEG00000024610	mrpl12	98	62.626	Labrus_bergylta
ENSMUSG00000039640	Mrpl12	100	86.070	ENSLAFG00000004594	MRPL12	100	86.567	Loxodonta_africana
ENSMUSG00000039640	Mrpl12	100	86.070	ENSMFAG00000042253	MRPL12	100	84.080	Macaca_fascicularis
ENSMUSG00000039640	Mrpl12	100	86.070	ENSMNEG00000016503	MRPL12	100	84.080	Macaca_nemestrina
ENSMUSG00000039640	Mrpl12	100	85.075	ENSMLEG00000041715	MRPL12	100	83.085	Mandrillus_leucophaeus
ENSMUSG00000039640	Mrpl12	97	62.887	ENSMAMG00000020677	mrpl12	97	62.944	Mastacembelus_armatus
ENSMUSG00000039640	Mrpl12	99	64.851	ENSMZEG00005011802	mrpl12	98	62.000	Maylandia_zebra
ENSMUSG00000039640	Mrpl12	99	64.851	ENSMZEG00005021473	mrpl12	98	62.000	Maylandia_zebra
ENSMUSG00000039640	Mrpl12	99	89.500	ENSMAUG00000002006	Mrpl12	99	89.500	Mesocricetus_auratus
ENSMUSG00000039640	Mrpl12	100	85.572	ENSMICG00000047418	MRPL12	100	87.562	Microcebus_murinus
ENSMUSG00000039640	Mrpl12	100	91.584	ENSMOCG00000019919	Mrpl12	100	92.079	Microtus_ochrogaster
ENSMUSG00000039640	Mrpl12	95	65.445	ENSMMOG00000011266	mrpl12	100	61.307	Mola_mola
ENSMUSG00000039640	Mrpl12	99	79.899	ENSMODG00000002902	MRPL12	99	79.397	Monodelphis_domestica
ENSMUSG00000039640	Mrpl12	97	64.467	ENSMALG00000001391	mrpl12	97	62.944	Monopterus_albus
ENSMUSG00000039640	Mrpl12	100	99.502	MGP_CAROLIEiJ_G0017522	Mrpl12	100	99.502	Mus_caroli
ENSMUSG00000039640	Mrpl12	100	98.507	MGP_PahariEiJ_G0018648	Mrpl12	100	98.507	Mus_pahari
ENSMUSG00000039640	Mrpl12	100	100.000	MGP_SPRETEiJ_G0018366	Mrpl12	100	100.000	Mus_spretus
ENSMUSG00000039640	Mrpl12	100	86.765	ENSNGAG00000010189	Mrpl12	100	87.745	Nannospalax_galili
ENSMUSG00000039640	Mrpl12	99	63.861	ENSNBRG00000020817	mrpl12	98	64.824	Neolamprologus_brichardi
ENSMUSG00000039640	Mrpl12	100	84.577	ENSNLEG00000035133	MRPL12	100	85.075	Nomascus_leucogenys
ENSMUSG00000039640	Mrpl12	85	69.006	ENSMEUG00000010783	-	100	69.591	Notamacropus_eugenii
ENSMUSG00000039640	Mrpl12	100	86.567	ENSODEG00000008765	MRPL12	100	86.070	Octodon_degus
ENSMUSG00000039640	Mrpl12	67	34.752	ENSOANG00000021537	-	100	34.752	Ornithorhynchus_anatinus
ENSMUSG00000039640	Mrpl12	98	66.337	ENSORLG00000007092	mrpl12	98	65.000	Oryzias_latipes
ENSMUSG00000039640	Mrpl12	98	66.337	ENSORLG00020001351	mrpl12	98	65.000	Oryzias_latipes_hni
ENSMUSG00000039640	Mrpl12	98	66.832	ENSORLG00015012065	mrpl12	98	65.500	Oryzias_latipes_hsok
ENSMUSG00000039640	Mrpl12	98	66.337	ENSOMEG00000006871	mrpl12	98	65.500	Oryzias_melastigma
ENSMUSG00000039640	Mrpl12	100	85.644	ENSOGAG00000005297	MRPL12	100	85.644	Otolemur_garnettii
ENSMUSG00000039640	Mrpl12	99	87.374	ENSOARG00000018221	MRPL12	87	87.374	Ovis_aries
ENSMUSG00000039640	Mrpl12	100	84.080	ENSPPAG00000042009	MRPL12	100	84.577	Pan_paniscus
ENSMUSG00000039640	Mrpl12	100	83.582	ENSPPRG00000002570	MRPL12	100	83.582	Panthera_pardus
ENSMUSG00000039640	Mrpl12	88	85.876	ENSPTIG00000019530	MRPL12	88	85.876	Panthera_tigris_altaica
ENSMUSG00000039640	Mrpl12	100	84.080	ENSPTRG00000043438	MRPL12	100	84.577	Pan_troglodytes
ENSMUSG00000039640	Mrpl12	100	85.572	ENSPANG00000019331	MRPL12	100	83.582	Papio_anubis
ENSMUSG00000039640	Mrpl12	85	70.588	ENSPKIG00000012772	mrpl12	86	67.647	Paramormyrops_kingsleyae
ENSMUSG00000039640	Mrpl12	98	64.824	ENSPSIG00000018211	MRPL12	99	66.332	Pelodiscus_sinensis
ENSMUSG00000039640	Mrpl12	98	64.677	ENSPMGG00000008509	mrpl12	98	65.000	Periophthalmus_magnuspinnatus
ENSMUSG00000039640	Mrpl12	100	91.542	ENSPEMG00000005848	Mrpl12	100	91.542	Peromyscus_maniculatus_bairdii
ENSMUSG00000039640	Mrpl12	89	59.890	ENSPMAG00000001357	mrpl12	85	59.890	Petromyzon_marinus
ENSMUSG00000039640	Mrpl12	98	77.778	ENSPCIG00000029585	MRPL12	99	80.303	Phascolarctos_cinereus
ENSMUSG00000039640	Mrpl12	99	63.285	ENSPFOG00000024338	mrpl12	95	63.768	Poecilia_formosa
ENSMUSG00000039640	Mrpl12	97	64.467	ENSPLAG00000002664	mrpl12	97	64.975	Poecilia_latipinna
ENSMUSG00000039640	Mrpl12	97	64.467	ENSPMEG00000021484	mrpl12	97	64.975	Poecilia_mexicana
ENSMUSG00000039640	Mrpl12	88	67.045	ENSPREG00000004225	mrpl12	93	67.614	Poecilia_reticulata
ENSMUSG00000039640	Mrpl12	100	84.577	ENSPPYG00000008744	MRPL12	100	85.075	Pongo_abelii
ENSMUSG00000039640	Mrpl12	100	73.134	ENSPCAG00000015148	MRPL12	100	73.134	Procavia_capensis
ENSMUSG00000039640	Mrpl12	100	87.562	ENSPCOG00000016998	MRPL12	100	88.557	Propithecus_coquereli
ENSMUSG00000039640	Mrpl12	100	83.582	ENSPVAG00000011002	MRPL12	100	83.582	Pteropus_vampyrus
ENSMUSG00000039640	Mrpl12	99	63.819	ENSPNYG00000008879	mrpl12	98	61.929	Pundamilia_nyererei
ENSMUSG00000039640	Mrpl12	86	69.186	ENSPNAG00000003320	mrpl12	87	69.186	Pygocentrus_nattereri
ENSMUSG00000039640	Mrpl12	96	94.792	ENSRNOG00000036695	Mrpl12	74	92.118	Rattus_norvegicus
ENSMUSG00000039640	Mrpl12	100	84.577	ENSRBIG00000029573	MRPL12	100	84.080	Rhinopithecus_bieti
ENSMUSG00000039640	Mrpl12	100	84.577	ENSRROG00000010180	MRPL12	100	84.080	Rhinopithecus_roxellana
ENSMUSG00000039640	Mrpl12	69	46.000	YGL068W	-	74	43.448	Saccharomyces_cerevisiae
ENSMUSG00000039640	Mrpl12	95	83.158	ENSSBOG00000033734	MRPL12	97	81.053	Saimiri_boliviensis_boliviensis
ENSMUSG00000039640	Mrpl12	97	61.735	ENSSFOG00015023051	mrpl12	83	64.671	Scleropages_formosus
ENSMUSG00000039640	Mrpl12	96	62.121	ENSSFOG00015023998	mrpl12	100	61.616	Scleropages_formosus
ENSMUSG00000039640	Mrpl12	99	63.861	ENSSMAG00000001700	mrpl12	99	62.376	Scophthalmus_maximus
ENSMUSG00000039640	Mrpl12	99	66.834	ENSSDUG00000014547	mrpl12	99	65.327	Seriola_dumerili
ENSMUSG00000039640	Mrpl12	97	66.497	ENSSLDG00000003829	mrpl12	97	65.990	Seriola_lalandi_dorsalis
ENSMUSG00000039640	Mrpl12	92	69.189	ENSSPUG00000011062	MRPL12	97	68.108	Sphenodon_punctatus
ENSMUSG00000039640	Mrpl12	97	66.667	ENSSPAG00000010692	mrpl12	97	64.975	Stegastes_partitus
ENSMUSG00000039640	Mrpl12	100	80.100	ENSSSCG00000033148	MRPL12	100	80.597	Sus_scrofa
ENSMUSG00000039640	Mrpl12	79	60.127	ENSTGUG00000003446	MRPL12	100	60.127	Taeniopygia_guttata
ENSMUSG00000039640	Mrpl12	96	62.500	ENSTRUG00000021764	mrpl12	78	62.000	Takifugu_rubripes
ENSMUSG00000039640	Mrpl12	95	68.041	ENSTNIG00000010438	mrpl12	92	65.464	Tetraodon_nigroviridis
ENSMUSG00000039640	Mrpl12	98	81.726	ENSTBEG00000010871	MRPL12	98	81.218	Tupaia_belangeri
ENSMUSG00000039640	Mrpl12	100	82.587	ENSTTRG00000007611	MRPL12	100	83.085	Tursiops_truncatus
ENSMUSG00000039640	Mrpl12	100	68.852	ENSUAMG00000016771	MRPL12	100	68.852	Ursus_americanus
ENSMUSG00000039640	Mrpl12	88	84.181	ENSUMAG00000016332	MRPL12	74	83.616	Ursus_maritimus
ENSMUSG00000039640	Mrpl12	100	83.582	ENSVVUG00000020000	MRPL12	100	83.582	Vulpes_vulpes
ENSMUSG00000039640	Mrpl12	97	67.513	ENSXMAG00000028444	mrpl12	97	65.990	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	10600119.	ISS	Function
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005761	mitochondrial ribosome	10600119.	ISS	Component
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISO	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006390	mitochondrial transcription	21873635.	IBA	Process
GO:0006390	mitochondrial transcription	-	ISO	Process
GO:0006412	translation	10600119.	ISS	Process
GO:0045893	positive regulation of transcription, DNA-templated	-	ISO	Process