EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000039652 (Gene tree)
Gene ID
208922
Gene Symbol
Cpeb3
Alias
4831444O18Rik
Full Name
cytoplasmic polyadenylation element binding protein 3
Gene Type
protein_coding
Species
Mus_musculus
Status
putative
Strand
Minus strand
Length
187311 bases
Position
chr19:37021291-37208601
Accession
2443075
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000115656RRM_1PF00076.221e-1111
ENSMUSP00000121987RRM_1PF00076.223.8e-1111
ENSMUSP00000120416RRM_1PF00076.223.9e-1111
ENSMUSP00000116309RRM_1PF00076.224e-1111
ENSMUSP00000078690RRM_1PF00076.224.3e-1111
ENSMUSP00000116172RRM_1PF00076.224.3e-1111
ENSMUSP00000118723RRM_1PF00076.224.3e-1111
ENSMUSP00000122442RRM_1PF00076.221.7e-0611
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000123727-2411XM_011247209ENSMUSP00000121987685 (aa)XP_011245511D3Z1R6
ENSMUST00000126188-4224XM_011247208ENSMUSP00000120416693 (aa)XP_011245510Q7TN99
ENSMUST00000142973-557-ENSMUSP00000117242127 (aa)-D3Z5F3
ENSMUST00000131917-665-ENSMUSP00000123080117 (aa)-D3YUL6
ENSMUST00000124158-4811-ENSMUSP00000115656415 (aa)-F6T0J8
ENSMUST00000154376-5671XM_006526829ENSMUSP00000116172716 (aa)XP_006526892A0A0R4J102
ENSMUST00000133988-659-ENSMUSP00000116749179 (aa)-D3Z3Z5
ENSMUST00000132580-3148XM_006526839ENSMUSP00000118723716 (aa)XP_006526902A0A0R4J102
ENSMUST00000126781-2095XM_011247210ENSMUSP00000122442561 (aa)XP_011245512Q7TN99
ENSMUST00000079754-5899XM_006526830ENSMUSP00000078690716 (aa)XP_006526893A0A0R4J102
ENSMUST00000136286-5260XM_011247207ENSMUSP00000116309699 (aa)XP_011245509D3Z5R9
ENSMUST00000128642-450-ENSMUSP0000011503895 (aa)-D3YXB8
Gene Model
Click here to download ENSMUSG00000039652's gene model file
Pathways
Pathway IDPathway NameSource
mmu04114Oocyte meiosisKEGG
mmu04914Progesterone-mediated oocyte maturationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000039652's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000039652Cpeb310078.037ENSMUSG00000039782Cpeb29961.736
ENSMUSG00000039652Cpeb310075.418ENSMUSG00000020300Cpeb49980.250
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000039652Cpeb310097.590ENSG00000107864CPEB310097.151Homo_sapiens
ENSMUSG00000039652Cpeb310089.157ENSAPOG00000003625cpeb310074.965Acanthochromis_polyacanthus
ENSMUSG00000039652Cpeb310097.636ENSAMEG00000014204CPEB310090.237Ailuropoda_melanoleuca
ENSMUSG00000039652Cpeb310087.470ENSACIG00000001933cpeb310074.619Amphilophus_citrinellus
ENSMUSG00000039652Cpeb310087.234ENSAOCG00000015423cpeb310074.896Amphiprion_ocellaris
ENSMUSG00000039652Cpeb310085.060ENSATEG00000010649cpeb310075.072Anabas_testudineus
ENSMUSG00000039652Cpeb37390.850ENSAPLG00000014437CPEB410090.850Anas_platyrhynchos
ENSMUSG00000039652Cpeb310096.690ENSACAG00000006335CPEB310085.535Anolis_carolinensis
ENSMUSG00000039652Cpeb310097.872ENSANAG00000037406CPEB310096.949Aotus_nancymaae
ENSMUSG00000039652Cpeb310086.998ENSACLG00000018590cpeb38974.480Astatotilapia_calliptera
ENSMUSG00000039652Cpeb310097.349ENSBTAG00000015450CPEB310097.147Bos_taurus
ENSMUSG00000039652Cpeb3100100.000ENSCJAG00000008495CPEB310097.214Callithrix_jacchus
ENSMUSG00000039652Cpeb310097.668ENSCAFG00000007423CPEB310097.668Canis_familiaris
ENSMUSG00000039652Cpeb310097.867ENSCAFG00020001981CPEB310096.792Canis_lupus_dingo
ENSMUSG00000039652Cpeb310097.636ENSCHIG00000017337CPEB310097.493Capra_hircus
ENSMUSG00000039652Cpeb310097.590ENSTSYG00000003928CPEB383100.000Carlito_syrichta
ENSMUSG00000039652Cpeb310097.872ENSCCAG00000033267CPEB310097.357Cebus_capucinus
ENSMUSG00000039652Cpeb310097.872ENSCATG00000038447CPEB310097.083Cercocebus_atys
ENSMUSG00000039652Cpeb3100100.000ENSCLAG00000011817CPEB310097.600Chinchilla_lanigera
ENSMUSG00000039652Cpeb310097.093ENSCSAG00000006579CPEB310097.093Chlorocebus_sabaeus
ENSMUSG00000039652Cpeb39087.634ENSCHOG00000000272-10090.083Choloepus_hoffmanni
ENSMUSG00000039652Cpeb310098.313ENSCPBG00000023779CPEB310085.515Chrysemys_picta_bellii
ENSMUSG00000039652Cpeb310097.872ENSCANG00000040306CPEB310097.218Colobus_angolensis_palliatus
ENSMUSG00000039652Cpeb310099.024ENSCGRG00001003846Cpeb310099.024Cricetulus_griseus_chok1gshd
ENSMUSG00000039652Cpeb310099.759ENSCGRG00000002839Cpeb310099.759Cricetulus_griseus_crigri
ENSMUSG00000039652Cpeb310076.786ENSCSEG00000008423cpeb310072.516Cynoglossus_semilaevis
ENSMUSG00000039652Cpeb310084.670ENSCVAG00000005998cpeb310070.874Cyprinodon_variegatus
ENSMUSG00000039652Cpeb310080.516ENSDARG00000060103cpeb310067.385Danio_rerio
ENSMUSG00000039652Cpeb310091.148ENSDNOG00000048639CPEB310091.051Dasypus_novemcinctus
ENSMUSG00000039652Cpeb310097.872ENSDORG00000028940Cpeb38999.793Dipodomys_ordii
ENSMUSG00000039652Cpeb310089.639ENSETEG00000000111CPEB310089.586Echinops_telfairi
ENSMUSG00000039652Cpeb39976.303ENSEBUG00000010745cpeb37963.158Eptatretus_burgeri
ENSMUSG00000039652Cpeb310099.759ENSEASG00005011095CPEB310098.326Equus_asinus_asinus
ENSMUSG00000039652Cpeb310099.759ENSECAG00000000077CPEB310098.187Equus_caballus
ENSMUSG00000039652Cpeb310090.120ENSELUG00000019251cpeb310075.180Esox_lucius
ENSMUSG00000039652Cpeb310097.636ENSFCAG00000032380CPEB310097.490Felis_catus
ENSMUSG00000039652Cpeb310091.489ENSFALG00000007952CPEB38785.612Ficedula_albicollis
ENSMUSG00000039652Cpeb310097.872ENSFDAG00000016459CPEB388100.000Fukomys_damarensis
ENSMUSG00000039652Cpeb310086.811ENSFHEG00000021371cpeb310070.000Fundulus_heteroclitus
ENSMUSG00000039652Cpeb38287.356ENSGMOG00000008307cpeb39971.340Gadus_morhua
ENSMUSG00000039652Cpeb310098.795ENSGALG00000006912CPEB310085.933Gallus_gallus
ENSMUSG00000039652Cpeb39986.667ENSGACG00000002944cpeb39974.090Gasterosteus_aculeatus
ENSMUSG00000039652Cpeb310098.313ENSGAGG00000008528CPEB310085.097Gopherus_agassizii
ENSMUSG00000039652Cpeb3100100.000ENSGGOG00000016441CPEB310097.218Gorilla_gorilla
ENSMUSG00000039652Cpeb310089.157ENSHBUG00000004097cpeb39374.619Haplochromis_burtoni
ENSMUSG00000039652Cpeb310097.872ENSHGLG00000014022CPEB310096.806Heterocephalus_glaber_female
ENSMUSG00000039652Cpeb310097.636ENSHGLG00100005200CPEB310088.734Heterocephalus_glaber_male
ENSMUSG00000039652Cpeb310087.470ENSHCOG00000005747cpeb310071.031Hippocampus_comes
ENSMUSG00000039652Cpeb310090.120ENSIPUG00000018571cpeb310074.652Ictalurus_punctatus
ENSMUSG00000039652Cpeb310097.872ENSSTOG00000028061CPEB310095.404Ictidomys_tridecemlineatus
ENSMUSG00000039652Cpeb3100100.000ENSJJAG00000009135Cpeb3100100.000Jaculus_jaculus
ENSMUSG00000039652Cpeb310089.157ENSLBEG00000025961cpeb310074.757Labrus_bergylta
ENSMUSG00000039652Cpeb310089.598ENSLACG00000011307CPEB39281.385Latimeria_chalumnae
ENSMUSG00000039652Cpeb310088.180ENSLOCG00000007131cpeb310075.833Lepisosteus_oculatus
ENSMUSG00000039652Cpeb310097.400ENSLAFG00000018716CPEB310096.662Loxodonta_africana
ENSMUSG00000039652Cpeb310097.590ENSMFAG00000025613CPEB310089.557Macaca_fascicularis
ENSMUSG00000039652Cpeb310097.872ENSMMUG00000015050CPEB310096.940Macaca_mulatta
ENSMUSG00000039652Cpeb310097.872ENSMNEG00000045465CPEB310096.949Macaca_nemestrina
ENSMUSG00000039652Cpeb310097.590ENSMLEG00000031794CPEB310095.787Mandrillus_leucophaeus
ENSMUSG00000039652Cpeb310089.639ENSMAMG00000012794cpeb310074.131Mastacembelus_armatus
ENSMUSG00000039652Cpeb310088.916ENSMZEG00005012068cpeb310074.480Maylandia_zebra
ENSMUSG00000039652Cpeb310091.489ENSMGAG00000009148CPEB39985.468Meleagris_gallopavo
ENSMUSG00000039652Cpeb310098.889ENSMAUG00000002789Cpeb310098.889Mesocricetus_auratus
ENSMUSG00000039652Cpeb310099.759ENSMICG00000026866CPEB310096.245Microcebus_murinus
ENSMUSG00000039652Cpeb310099.164ENSMOCG00000016486Cpeb310099.164Microtus_ochrogaster
ENSMUSG00000039652Cpeb39484.439ENSMMOG00000008209cpeb38873.906Mola_mola
ENSMUSG00000039652Cpeb310091.726ENSMODG00000006673CPEB310084.563Monodelphis_domestica
ENSMUSG00000039652Cpeb310087.711ENSMALG00000009305cpeb39395.270Monopterus_albus
ENSMUSG00000039652Cpeb3100100.000MGP_CAROLIEiJ_G0022910Cpeb3100100.000Mus_caroli
ENSMUSG00000039652Cpeb3100100.000MGP_PahariEiJ_G0014405Cpeb3100100.000Mus_pahari
ENSMUSG00000039652Cpeb3100100.000MGP_SPRETEiJ_G0023829Cpeb3100100.000Mus_spretus
ENSMUSG00000039652Cpeb310097.266ENSMPUG00000017227CPEB310097.266Mustela_putorius_furo
ENSMUSG00000039652Cpeb310099.759ENSNGAG00000015621Cpeb310097.905Nannospalax_galili
ENSMUSG00000039652Cpeb310083.848ENSNBRG00000018343cpeb39173.420Neolamprologus_brichardi
ENSMUSG00000039652Cpeb310097.872ENSNLEG00000012600CPEB310097.357Nomascus_leucogenys
ENSMUSG00000039652Cpeb39090.591ENSMEUG00000009948-7592.837Notamacropus_eugenii
ENSMUSG00000039652Cpeb310097.872ENSODEG00000004591CPEB310095.890Octodon_degus
ENSMUSG00000039652Cpeb37895.758ENSOANG00000015723-10098.485Ornithorhynchus_anatinus
ENSMUSG00000039652Cpeb310097.872ENSOCUG00000010454CPEB310097.214Oryctolagus_cuniculus
ENSMUSG00000039652Cpeb310082.494ENSORLG00000000726cpeb310071.988Oryzias_latipes
ENSMUSG00000039652Cpeb310083.373ENSORLG00020004475cpeb310072.806Oryzias_latipes_hni
ENSMUSG00000039652Cpeb310086.571ENSORLG00015011683cpeb310072.806Oryzias_latipes_hsok
ENSMUSG00000039652Cpeb310083.133ENSOMEG00000018265cpeb39371.511Oryzias_melastigma
ENSMUSG00000039652Cpeb310095.809ENSOGAG00000002002CPEB310095.809Otolemur_garnettii
ENSMUSG00000039652Cpeb310097.376ENSOARG00000016671CPEB310097.376Ovis_aries
ENSMUSG00000039652Cpeb310097.349ENSPPAG00000031528CPEB310097.996Pan_paniscus
ENSMUSG00000039652Cpeb310097.376ENSPPRG00000015654CPEB310097.376Panthera_pardus
ENSMUSG00000039652Cpeb310097.349ENSPTIG00000012018CPEB39799.655Panthera_tigris_altaica
ENSMUSG00000039652Cpeb310097.872ENSPTRG00000002753CPEB310097.083Pan_troglodytes
ENSMUSG00000039652Cpeb310097.590ENSPANG00000021561CPEB310096.154Papio_anubis
ENSMUSG00000039652Cpeb310090.361ENSPKIG00000015878cpeb310077.443Paramormyrops_kingsleyae
ENSMUSG00000039652Cpeb310081.055ENSPMGG00000022722cpeb310064.892Periophthalmus_magnuspinnatus
ENSMUSG00000039652Cpeb310099.164ENSPEMG00000008448Cpeb310099.164Peromyscus_maniculatus_bairdii
ENSMUSG00000039652Cpeb310099.036ENSPCIG00000017302CPEB310086.345Phascolarctos_cinereus
ENSMUSG00000039652Cpeb310081.368ENSPFOG00000011231cpeb310070.791Poecilia_formosa
ENSMUSG00000039652Cpeb310087.019ENSPLAG00000002852cpeb310071.845Poecilia_latipinna
ENSMUSG00000039652Cpeb310087.019ENSPMEG00000021572cpeb310072.677Poecilia_mexicana
ENSMUSG00000039652Cpeb310087.260ENSPREG00000003085cpeb310072.816Poecilia_reticulata
ENSMUSG00000039652Cpeb310092.733ENSPPYG00000002481CPEB310092.733Pongo_abelii
ENSMUSG00000039652Cpeb310091.084ENSPCAG00000012417CPEB310090.409Procavia_capensis
ENSMUSG00000039652Cpeb310097.636ENSPCOG00000023690CPEB310096.932Propithecus_coquereli
ENSMUSG00000039652Cpeb39096.505ENSPVAG00000007664CPEB38099.174Pteropus_vampyrus
ENSMUSG00000039652Cpeb310089.157ENSPNYG00000005300cpeb310074.619Pundamilia_nyererei
ENSMUSG00000039652Cpeb310089.398ENSPNAG00000012111cpeb310076.283Pygocentrus_nattereri
ENSMUSG00000039652Cpeb310096.901ENSRNOG00000020689Cpeb39496.901Rattus_norvegicus
ENSMUSG00000039652Cpeb310097.872ENSRBIG00000041079CPEB310096.940Rhinopithecus_bieti
ENSMUSG00000039652Cpeb3100100.000ENSRROG00000031558CPEB310096.940Rhinopithecus_roxellana
ENSMUSG00000039652Cpeb310093.735ENSSBOG00000035843CPEB310097.872Saimiri_boliviensis_boliviensis
ENSMUSG00000039652Cpeb35399.087ENSSHAG00000018596-9699.087Sarcophilus_harrisii
ENSMUSG00000039652Cpeb310077.197ENSSFOG00015018275-9980.637Scleropages_formosus
ENSMUSG00000039652Cpeb310086.506ENSSFOG00015004974cpeb310074.569Scleropages_formosus
ENSMUSG00000039652Cpeb310089.880ENSSMAG00000013924cpeb310075.360Scophthalmus_maximus
ENSMUSG00000039652Cpeb310085.542ENSSDUG00000019766cpeb310074.640Seriola_dumerili
ENSMUSG00000039652Cpeb310089.639ENSSLDG00000021438cpeb310074.638Seriola_lalandi_dorsalis
ENSMUSG00000039652Cpeb39097.043ENSSARG00000001994CPEB310099.725Sorex_araneus
ENSMUSG00000039652Cpeb37398.671ENSSPUG00000003601CPEB39499.087Sphenodon_punctatus
ENSMUSG00000039652Cpeb310089.639ENSSPAG00000004725cpeb310075.519Stegastes_partitus
ENSMUSG00000039652Cpeb310099.759ENSSSCG00000010468CPEB310097.106Sus_scrofa
ENSMUSG00000039652Cpeb310096.690ENSTGUG00000008988CPEB310085.933Taeniopygia_guttata
ENSMUSG00000039652Cpeb35392.760ENSTRUG00000011309cpeb38892.760Takifugu_rubripes
ENSMUSG00000039652Cpeb310090.602ENSTBEG00000013125-6092.548Tupaia_belangeri
ENSMUSG00000039652Cpeb310093.253ENSTTRG00000012334CPEB310092.735Tursiops_truncatus
ENSMUSG00000039652Cpeb310097.867ENSUAMG00000010827CPEB310094.553Ursus_americanus
ENSMUSG00000039652Cpeb37396.358ENSUMAG00000001870-9798.951Ursus_maritimus
ENSMUSG00000039652Cpeb310097.695ENSVVUG00000021375CPEB310097.695Vulpes_vulpes
ENSMUSG00000039652Cpeb310087.943ENSXETG00000012190cpeb39877.396Xenopus_tropicalis
ENSMUSG00000039652Cpeb310083.173ENSXCOG00000006122cpeb310072.012Xiphophorus_couchianus
ENSMUSG00000039652Cpeb310084.375ENSXMAG00000007652cpeb39493.836Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000122negative regulation of transcription by RNA polymerase II-ISOProcess
GO:0000900translation repressor activity, mRNA regulatory element binding21873635.IBAFunction
GO:0000900translation repressor activity, mRNA regulatory element binding22157746.IDAFunction
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding17024188.IDAFunction
GO:0003723RNA binding-ISOFunction
GO:0003730mRNA 3'-UTR binding21873635.IBAFunction
GO:0003730mRNA 3'-UTR binding22153079.22711986.24155305.IDAFunction
GO:0003730mRNA 3'-UTR binding-ISOFunction
GO:0005515protein binding22153079.22157746.22496444.26074071.IPIFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005634nucleus20937770.IDAComponent
GO:0005634nucleus-ISOComponent
GO:0005737cytoplasm21873635.IBAComponent
GO:0005737cytoplasm20937770.22711986.IDAComponent
GO:0005737cytoplasm-ISOComponent
GO:0005886plasma membrane-IEAComponent
GO:0006417regulation of translation-IEAProcess
GO:0007616long-term memory24155305.26074003.IMPProcess
GO:0008135translation factor activity, RNA binding21873635.IBAFunction
GO:0008135translation factor activity, RNA binding22153079.24155305.IDAFunction
GO:0008135translation factor activity, RNA binding-ISOFunction
GO:0016020membrane-IEAComponent
GO:0017148negative regulation of translation17024188.26074071.IDAProcess
GO:0017148negative regulation of translation17024188.IMPProcess
GO:0017148negative regulation of translation-ISOProcess
GO:0030014CCR4-NOT complex-ISOComponent
GO:0030054cell junction-IEAComponent
GO:0030425dendrite17024188.IDAComponent
GO:0030425dendrite-ISOComponent
GO:0035613RNA stem-loop binding17024188.IDAFunction
GO:0035925mRNA 3'-UTR AU-rich region binding17024188.IDAFunction
GO:0042995cell projection-IEAComponent
GO:0043005neuron projection21873635.IBAComponent
GO:0043005neuron projection22711986.IDAComponent
GO:0043005neuron projection-ISOComponent
GO:0043022ribosome binding21873635.IBAFunction
GO:0045182translation regulator activity-IEAFunction
GO:0045202synapse21873635.IBAComponent
GO:0045202synapse17024188.22711986.IDAComponent
GO:0045211postsynaptic membrane-IEAComponent
GO:0045727positive regulation of translation22153079.26074071.IDAProcess
GO:0045727positive regulation of translation26074003.IMPProcess
GO:0048167regulation of synaptic plasticity24155305.IMPProcess
GO:0050955thermoception26915043.IMPProcess
GO:0060213positive regulation of nuclear-transcribed mRNA poly(A) tail shortening-ISOProcess
GO:0060998regulation of dendritic spine development24155305.IMPProcess
GO:0060999positive regulation of dendritic spine development22153079.IDAProcess
GO:00611583'-UTR-mediated mRNA destabilization-ISOProcess
GO:0071230cellular response to amino acid stimulus17024188.20937770.22153079.22711986.IDAProcess
GO:0071230cellular response to amino acid stimulus-ISOProcess
GO:0097440apical dendrite22153079.IDAComponent
GO:0098794postsynapse-ISOComponent
GO:1900153positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay-ISOProcess
GO:1900248negative regulation of cytoplasmic translational elongation22157746.IDAProcess
GO:1900273positive regulation of long-term synaptic potentiation26074003.IMPProcess
GO:1900365positive regulation of mRNA polyadenylation22153079.IDAProcess
GO:1990124messenger ribonucleoprotein complex21873635.IBAComponent
GO:2000766negative regulation of cytoplasmic translation21873635.IBAProcess

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