EuRBPDB

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  • Description
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000039671 (Gene tree)
Gene ID
228880
Gene Symbol
Zmynd8
Alias
1110013E22Rik|2010005I16Rik|3632413B07Rik|Prkcbp1|RACK7|ZMYND8
Full Name
zinc finger%2C MYND-type containing 8
Gene Type
protein_coding
Species
Mus_musculus
Status
putative
Strand
Minus strand
Length
114865
Position
chr2: 165784152-165899016
Accession
1918025
RBP type
non-canonical RBP
Summary
-
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27768875High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem CellsnIC & mESC2016.09He CDOI: 10.1016/j.molcel.2016.09.034
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000139202-434--- (aa)--
ENSMUST00000170272-5076-ENSMUSP000001286801154 (aa)-Q3UH28
ENSMUST00000146204-527--- (aa)--
ENSMUST00000177633-5093XM_006499385ENSMUSP000001362111174 (aa)XP_006499463Q3U1M7
ENSMUST00000109269-6188XM_006499378ENSMUSP000001048921235 (aa)XP_006499441A2A484
ENSMUST00000152682-3817--- (aa)--
ENSMUST00000109266-5072XM_006499387ENSMUSP000001048891199 (aa)XP_006499450E9Q8D1
ENSMUST00000136842-629-ENSMUSP00000120631191 (aa)-A2A486
ENSMUST00000144530-311-ENSMUSP0000012136347 (aa)-A2A479
ENSMUST00000018050-4130XM_017317954ENSMUSP000000180501179 (aa)XP_017173443A2A483
ENSMUST00000134557-725--- (aa)--
ENSMUST00000109262-2515-ENSMUSP00000104885472 (aa)-A2A481
ENSMUST00000153655-2484XM_006499421ENSMUSP00000120932492 (aa)XP_006499484A2A480
ENSMUST00000150564-300--- (aa)--
ENSMUST00000088113-3757-ENSMUSP000000854361094 (aa)-A2A485
ENSMUST00000124085-960--- (aa)--
ENSMUST00000150871-515--- (aa)--
ENSMUST00000148674-663--- (aa)--
ENSMUST00000139907-584--- (aa)--
ENSMUST00000099084-5232XM_006499384ENSMUSP000000966831206 (aa)XP_006499447A2A482
ENSMUST00000149369-990--- (aa)--
Gene Model
Click here to download ENSMUSG00000039671's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000039671's network
Orthologs identified by RBPome
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000039671Zmynd89992.569ENSG00000101040ZMYND810096.000Homo_sapiens
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003714transcription corepressor activity-ISOFunction
GO:0005634nucleus-ISOComponent
GO:0005737cytoplasm-ISOComponent
GO:0008270zinc ion binding-ISOFunction
GO:0019904protein domain specific binding-ISOFunction
GO:0030336negative regulation of cell migration-ISOProcess
GO:0035064methylated histone binding-ISOFunction
GO:0043197dendritic spine-ISOComponent
GO:0043198dendritic shaft-ISOComponent
GO:0047485protein N-terminus binding-ISOFunction
GO:0051491positive regulation of filopodium assembly-ISOProcess
GO:0060999positive regulation of dendritic spine development-ISOProcess
GO:0070577lysine-acetylated histone binding-ISOFunction
GO:0098815modulation of excitatory postsynaptic potential-ISOProcess
GO:1902897regulation of postsynaptic density protein 95 clustering-ISOProcess
GO:1902952positive regulation of dendritic spine maintenance-ISOProcess

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