EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000039680 (Gene tree)
Gene ID: 121022
Gene Symbol: Mrps6
Alias: -
Full Name: mitochondrial ribosomal protein S6
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 53958 bases
Position: chr16:92058270-92112227
Accession: 2153111
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000037631	Ribosomal_S6	PF01250.17	8.4e-16	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000047429	-	846	-	ENSMUSP00000037631	125 (aa)	-	P58064
ENSMUST00000232222	-	1115	-	-	- (aa)	-	-
ENSMUST00000138961	-	702	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000039680's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000039680's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000039680	Mrps6	50	100.000	ENSMUSG00000116930	AC144408.3	53	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000039680	Mrps6	100	85.600	ENSG00000243927	MRPS6	100	85.600	Homo_sapiens
ENSMUSG00000039680	Mrps6	76	68.421	ENSAPOG00000001860	mrps6	82	68.421	Acanthochromis_polyacanthus
ENSMUSG00000039680	Mrps6	97	78.512	ENSAMEG00000014707	MRPS6	100	78.512	Ailuropoda_melanoleuca
ENSMUSG00000039680	Mrps6	86	61.682	ENSACIG00000009753	mrps6	86	61.682	Amphilophus_citrinellus
ENSMUSG00000039680	Mrps6	76	65.263	ENSAOCG00000003466	mrps6	79	65.263	Amphiprion_ocellaris
ENSMUSG00000039680	Mrps6	86	59.813	ENSAPEG00000015740	mrps6	97	59.813	Amphiprion_percula
ENSMUSG00000039680	Mrps6	86	60.748	ENSATEG00000017579	mrps6	97	60.748	Anabas_testudineus
ENSMUSG00000039680	Mrps6	98	62.602	ENSACAG00000005071	MRPS6	100	62.602	Anolis_carolinensis
ENSMUSG00000039680	Mrps6	100	80.800	ENSANAG00000022450	MRPS6	100	80.800	Aotus_nancymaae
ENSMUSG00000039680	Mrps6	86	63.551	ENSACLG00000026010	mrps6	88	63.551	Astatotilapia_calliptera
ENSMUSG00000039680	Mrps6	76	65.263	ENSAMXG00000026285	mrps6	83	65.263	Astyanax_mexicanus
ENSMUSG00000039680	Mrps6	99	82.258	ENSBTAG00000012594	MRPS6	100	82.258	Bos_taurus
ENSMUSG00000039680	Mrps6	100	80.800	ENSCJAG00000043803	MRPS6	100	80.800	Callithrix_jacchus
ENSMUSG00000039680	Mrps6	99	82.258	ENSCAFG00000028779	MRPS6	100	82.258	Canis_familiaris
ENSMUSG00000039680	Mrps6	99	82.258	ENSCAFG00020024603	MRPS6	100	82.258	Canis_lupus_dingo
ENSMUSG00000039680	Mrps6	99	84.677	ENSCHIG00000020464	MRPS6	100	84.677	Capra_hircus
ENSMUSG00000039680	Mrps6	100	82.400	ENSTSYG00000004217	MRPS6	100	82.400	Carlito_syrichta
ENSMUSG00000039680	Mrps6	87	81.651	ENSCAPG00000003067	MRPS6	100	81.651	Cavia_aperea
ENSMUSG00000039680	Mrps6	87	81.651	ENSCPOG00000036980	MRPS6	100	81.651	Cavia_porcellus
ENSMUSG00000039680	Mrps6	100	82.400	ENSCCAG00000024506	MRPS6	100	82.400	Cebus_capucinus
ENSMUSG00000039680	Mrps6	100	82.400	ENSCATG00000005273	MRPS6	100	82.400	Cercocebus_atys
ENSMUSG00000039680	Mrps6	87	85.321	ENSCLAG00000004549	MRPS6	100	85.321	Chinchilla_lanigera
ENSMUSG00000039680	Mrps6	100	83.200	ENSCSAG00000009933	MRPS6	100	83.200	Chlorocebus_sabaeus
ENSMUSG00000039680	Mrps6	87	85.321	ENSCHOG00000003863	MRPS6	100	85.321	Choloepus_hoffmanni
ENSMUSG00000039680	Mrps6	88	80.909	ENSCANG00000041718	MRPS6	100	80.909	Colobus_angolensis_palliatus
ENSMUSG00000039680	Mrps6	100	90.400	ENSCGRG00001004615	Mrps6	100	90.400	Cricetulus_griseus_chok1gshd
ENSMUSG00000039680	Mrps6	88	89.091	ENSCGRG00000018105	Mrps6	100	89.091	Cricetulus_griseus_crigri
ENSMUSG00000039680	Mrps6	86	58.879	ENSCSEG00000011973	mrps6	97	58.879	Cynoglossus_semilaevis
ENSMUSG00000039680	Mrps6	76	69.474	ENSCVAG00000004108	mrps6	83	69.474	Cyprinodon_variegatus
ENSMUSG00000039680	Mrps6	86	55.556	ENSDARG00000039543	mrps6	92	55.556	Danio_rerio
ENSMUSG00000039680	Mrps6	99	83.065	ENSDNOG00000041980	MRPS6	100	83.065	Dasypus_novemcinctus
ENSMUSG00000039680	Mrps6	100	81.600	ENSDORG00000028219	Mrps6	100	81.600	Dipodomys_ordii
ENSMUSG00000039680	Mrps6	92	46.087	ENSEBUG00000001150	mrps6	100	45.968	Eptatretus_burgeri
ENSMUSG00000039680	Mrps6	87	85.321	ENSEASG00005006162	MRPS6	90	85.321	Equus_asinus_asinus
ENSMUSG00000039680	Mrps6	86	61.111	ENSELUG00000015914	mrps6	93	61.111	Esox_lucius
ENSMUSG00000039680	Mrps6	99	85.484	ENSFCAG00000035307	MRPS6	100	85.484	Felis_catus
ENSMUSG00000039680	Mrps6	97	63.636	ENSFALG00000005093	MRPS6	99	63.636	Ficedula_albicollis
ENSMUSG00000039680	Mrps6	87	81.651	ENSFDAG00000014986	MRPS6	100	81.651	Fukomys_damarensis
ENSMUSG00000039680	Mrps6	97	55.738	ENSFHEG00000005395	mrps6	100	55.738	Fundulus_heteroclitus
ENSMUSG00000039680	Mrps6	76	64.211	ENSGMOG00000019810	mrps6	81	64.211	Gadus_morhua
ENSMUSG00000039680	Mrps6	93	57.759	ENSGAFG00000006521	mrps6	100	57.759	Gambusia_affinis
ENSMUSG00000039680	Mrps6	98	63.115	ENSGAGG00000017604	MRPS6	100	63.115	Gopherus_agassizii
ENSMUSG00000039680	Mrps6	88	84.545	ENSGGOG00000043405	MRPS6	100	84.545	Gorilla_gorilla
ENSMUSG00000039680	Mrps6	86	63.551	ENSHBUG00000010529	mrps6	84	63.551	Haplochromis_burtoni
ENSMUSG00000039680	Mrps6	99	83.871	ENSHGLG00000011207	MRPS6	100	83.871	Heterocephalus_glaber_female
ENSMUSG00000039680	Mrps6	87	82.569	ENSHGLG00100016976	MRPS6	100	82.569	Heterocephalus_glaber_male
ENSMUSG00000039680	Mrps6	92	55.652	ENSHCOG00000012233	mrps6	99	55.652	Hippocampus_comes
ENSMUSG00000039680	Mrps6	87	80.734	ENSSTOG00000028147	MRPS6	100	80.734	Ictidomys_tridecemlineatus
ENSMUSG00000039680	Mrps6	100	81.600	ENSJJAG00000019018	Mrps6	100	81.600	Jaculus_jaculus
ENSMUSG00000039680	Mrps6	76	64.211	ENSKMAG00000015801	mrps6	80	64.211	Kryptolebias_marmoratus
ENSMUSG00000039680	Mrps6	76	60.000	ENSLBEG00000012963	mrps6	78	60.000	Labrus_bergylta
ENSMUSG00000039680	Mrps6	98	60.163	ENSLACG00000011712	MRPS6	100	60.163	Latimeria_chalumnae
ENSMUSG00000039680	Mrps6	86	60.185	ENSLOCG00000018238	mrps6	90	60.185	Lepisosteus_oculatus
ENSMUSG00000039680	Mrps6	91	74.561	ENSLAFG00000020645	MRPS6	92	74.561	Loxodonta_africana
ENSMUSG00000039680	Mrps6	88	80.909	ENSMFAG00000032733	MRPS6	95	80.909	Macaca_fascicularis
ENSMUSG00000039680	Mrps6	88	80.909	ENSMMUG00000023156	MRPS6	95	80.909	Macaca_mulatta
ENSMUSG00000039680	Mrps6	88	79.091	ENSMNEG00000004266	MRPS6	95	79.091	Macaca_nemestrina
ENSMUSG00000039680	Mrps6	88	80.909	ENSMLEG00000042372	MRPS6	100	80.909	Mandrillus_leucophaeus
ENSMUSG00000039680	Mrps6	86	61.682	ENSMAMG00000019881	mrps6	93	61.682	Mastacembelus_armatus
ENSMUSG00000039680	Mrps6	86	63.551	ENSMZEG00005008327	mrps6	88	63.551	Maylandia_zebra
ENSMUSG00000039680	Mrps6	86	60.185	ENSMGAG00000016139	MRPS6	100	60.185	Meleagris_gallopavo
ENSMUSG00000039680	Mrps6	100	85.600	ENSMICG00000027621	MRPS6	100	85.600	Microcebus_murinus
ENSMUSG00000039680	Mrps6	100	93.600	ENSMOCG00000006588	Mrps6	100	93.600	Microtus_ochrogaster
ENSMUSG00000039680	Mrps6	86	62.617	ENSMMOG00000003410	mrps6	80	62.617	Mola_mola
ENSMUSG00000039680	Mrps6	87	74.312	ENSMODG00000021054	MRPS6	92	74.312	Monodelphis_domestica
ENSMUSG00000039680	Mrps6	76	67.368	ENSMALG00000002531	mrps6	86	67.368	Monopterus_albus
ENSMUSG00000039680	Mrps6	100	100.000	MGP_CAROLIEiJ_G0020970	Mrps6	100	100.000	Mus_caroli
ENSMUSG00000039680	Mrps6	100	97.600	MGP_PahariEiJ_G0016675	Mrps6	100	97.600	Mus_pahari
ENSMUSG00000039680	Mrps6	100	100.000	MGP_SPRETEiJ_G0021876	Mrps6	100	100.000	Mus_spretus
ENSMUSG00000039680	Mrps6	99	85.484	ENSMPUG00000001330	MRPS6	100	85.484	Mustela_putorius_furo
ENSMUSG00000039680	Mrps6	89	84.685	ENSMLUG00000027328	MRPS6	100	84.685	Myotis_lucifugus
ENSMUSG00000039680	Mrps6	100	88.000	ENSNGAG00000004525	Mrps6	100	88.000	Nannospalax_galili
ENSMUSG00000039680	Mrps6	86	62.617	ENSNBRG00000015785	mrps6	88	62.617	Neolamprologus_brichardi
ENSMUSG00000039680	Mrps6	99	83.065	ENSNLEG00000033707	MRPS6	100	83.065	Nomascus_leucogenys
ENSMUSG00000039680	Mrps6	98	77.049	ENSMEUG00000006954	MRPS6	71	77.049	Notamacropus_eugenii
ENSMUSG00000039680	Mrps6	88	80.909	ENSOPRG00000018417	-	61	80.909	Ochotona_princeps
ENSMUSG00000039680	Mrps6	99	80.645	ENSODEG00000019042	-	100	80.645	Octodon_degus
ENSMUSG00000039680	Mrps6	99	80.645	ENSODEG00000019820	-	100	80.645	Octodon_degus
ENSMUSG00000039680	Mrps6	99	82.258	ENSODEG00000003176	-	100	82.258	Octodon_degus
ENSMUSG00000039680	Mrps6	86	62.617	ENSONIG00000009920	mrps6	91	62.617	Oreochromis_niloticus
ENSMUSG00000039680	Mrps6	88	80.000	ENSOCUG00000025692	MRPS6	99	80.000	Oryctolagus_cuniculus
ENSMUSG00000039680	Mrps6	76	69.474	ENSORLG00000011435	mrps6	79	69.474	Oryzias_latipes
ENSMUSG00000039680	Mrps6	76	70.526	ENSORLG00020016619	mrps6	83	70.526	Oryzias_latipes_hni
ENSMUSG00000039680	Mrps6	76	70.526	ENSORLG00015001426	mrps6	87	70.526	Oryzias_latipes_hsok
ENSMUSG00000039680	Mrps6	93	60.345	ENSOMEG00000022340	mrps6	99	60.345	Oryzias_melastigma
ENSMUSG00000039680	Mrps6	99	81.452	ENSOGAG00000031219	MRPS6	100	81.452	Otolemur_garnettii
ENSMUSG00000039680	Mrps6	88	82.727	ENSOARG00000012707	MRPS6	97	76.423	Ovis_aries
ENSMUSG00000039680	Mrps6	88	84.545	ENSPPAG00000033507	MRPS6	100	84.545	Pan_paniscus
ENSMUSG00000039680	Mrps6	87	84.404	ENSPPRG00000011728	MRPS6	88	84.404	Panthera_pardus
ENSMUSG00000039680	Mrps6	87	84.404	ENSPTIG00000000875	MRPS6	88	84.404	Panthera_tigris_altaica
ENSMUSG00000039680	Mrps6	100	85.600	ENSPTRG00000013877	MRPS6	100	85.600	Pan_troglodytes
ENSMUSG00000039680	Mrps6	100	83.200	ENSPANG00000033815	MRPS6	100	83.200	Papio_anubis
ENSMUSG00000039680	Mrps6	93	56.034	ENSPKIG00000006507	mrps6	93	56.034	Paramormyrops_kingsleyae
ENSMUSG00000039680	Mrps6	91	54.386	ENSPSIG00000017909	MRPS6	99	56.731	Pelodiscus_sinensis
ENSMUSG00000039680	Mrps6	93	88.793	ENSPEMG00000023075	Mrps6	100	91.818	Peromyscus_maniculatus_bairdii
ENSMUSG00000039680	Mrps6	98	77.869	ENSPCIG00000008946	MRPS6	100	77.869	Phascolarctos_cinereus
ENSMUSG00000039680	Mrps6	76	67.368	ENSPFOG00000016295	mrps6	87	67.368	Poecilia_formosa
ENSMUSG00000039680	Mrps6	76	67.368	ENSPLAG00000003859	mrps6	79	67.368	Poecilia_latipinna
ENSMUSG00000039680	Mrps6	76	66.316	ENSPMEG00000019989	mrps6	82	66.316	Poecilia_mexicana
ENSMUSG00000039680	Mrps6	76	65.263	ENSPREG00000023188	mrps6	86	65.263	Poecilia_reticulata
ENSMUSG00000039680	Mrps6	86	80.556	ENSPPYG00000011386	MRPS6	88	79.646	Pongo_abelii
ENSMUSG00000039680	Mrps6	88	79.091	ENSPCAG00000002299	MRPS6	100	79.091	Procavia_capensis
ENSMUSG00000039680	Mrps6	96	85.833	ENSPCOG00000013816	MRPS6	100	84.800	Propithecus_coquereli
ENSMUSG00000039680	Mrps6	99	84.677	ENSPVAG00000013059	MRPS6	67	84.677	Pteropus_vampyrus
ENSMUSG00000039680	Mrps6	86	63.551	ENSPNYG00000017777	mrps6	88	63.551	Pundamilia_nyererei
ENSMUSG00000039680	Mrps6	76	64.211	ENSPNAG00000027225	mrps6	76	64.211	Pygocentrus_nattereri
ENSMUSG00000039680	Mrps6	100	96.000	ENSRNOG00000059381	Mrps6	100	96.000	Rattus_norvegicus
ENSMUSG00000039680	Mrps6	88	81.818	ENSRBIG00000003438	MRPS6	100	81.818	Rhinopithecus_bieti
ENSMUSG00000039680	Mrps6	88	80.909	ENSRROG00000040127	MRPS6	88	80.909	Rhinopithecus_roxellana
ENSMUSG00000039680	Mrps6	89	80.180	ENSSBOG00000034972	MRPS6	99	80.180	Saimiri_boliviensis_boliviensis
ENSMUSG00000039680	Mrps6	77	65.625	ENSSFOG00015003890	mrps6	75	65.625	Scleropages_formosus
ENSMUSG00000039680	Mrps6	76	65.263	ENSSMAG00000008876	mrps6	82	65.263	Scophthalmus_maximus
ENSMUSG00000039680	Mrps6	76	66.316	ENSSDUG00000005175	mrps6	88	66.316	Seriola_dumerili
ENSMUSG00000039680	Mrps6	86	60.748	ENSSLDG00000023246	mrps6	97	60.748	Seriola_lalandi_dorsalis
ENSMUSG00000039680	Mrps6	80	55.000	ENSSPUG00000013319	MRPS6	100	55.000	Sphenodon_punctatus
ENSMUSG00000039680	Mrps6	76	67.368	ENSSPAG00000010499	mrps6	86	67.368	Stegastes_partitus
ENSMUSG00000039680	Mrps6	99	83.871	ENSSSCG00000026981	MRPS6	100	83.871	Sus_scrofa
ENSMUSG00000039680	Mrps6	97	62.810	ENSTGUG00000000454	MRPS6	99	62.810	Taeniopygia_guttata
ENSMUSG00000039680	Mrps6	86	61.111	ENSTRUG00000021829	mrps6	95	61.111	Takifugu_rubripes
ENSMUSG00000039680	Mrps6	87	87.156	ENSTTRG00000004878	MRPS6	100	87.156	Tursiops_truncatus
ENSMUSG00000039680	Mrps6	92	80.000	ENSUAMG00000028318	MRPS6	100	80.000	Ursus_americanus
ENSMUSG00000039680	Mrps6	97	76.860	ENSUMAG00000020133	MRPS6	98	76.860	Ursus_maritimus
ENSMUSG00000039680	Mrps6	87	72.477	ENSVPAG00000009160	MRPS6	100	72.477	Vicugna_pacos
ENSMUSG00000039680	Mrps6	92	79.130	ENSVVUG00000022921	MRPS6	100	79.130	Vulpes_vulpes
ENSMUSG00000039680	Mrps6	99	55.645	ENSXETG00000032139	MRPS6	100	60.000	Xenopus_tropicalis
ENSMUSG00000039680	Mrps6	76	67.368	ENSXMAG00000019807	mrps6	86	67.368	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	11402041.	ISS	Function
GO:0005739	mitochondrion	14651853.18614015.	HDA	Component
GO:0005763	mitochondrial small ribosomal subunit	21873635.	IBA	Component
GO:0005763	mitochondrial small ribosomal subunit	-	ISO	Component
GO:0005763	mitochondrial small ribosomal subunit	11402041.	ISS	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	-	IEA	Process
GO:0019843	rRNA binding	-	IEA	Function
GO:0032543	mitochondrial translation	11402041.	ISS	Process
GO:0070181	small ribosomal subunit rRNA binding	21873635.	IBA	Function