EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000039981 (Gene tree)
Gene ID: 237256
Gene Symbol: Zc3h12d
Alias: D730019B10Rik|TFL
Full Name: zinc finger CCCH type containing 12D
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 37927 bases
Position: chr10:7832470-7870396
Accession: 3045313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000040217	RNase_Zc3h12a	PF11977.8	4.1e-65	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000039484	-	4092	XM_006512723	ENSMUSP00000040217	533 (aa)	XP_006512786	E9QNR7

Gene Model

Click here to download ENSMUSG00000039981's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000039981's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000039981	Zc3h12d	56	60.535	ENSMUSG00000035045	Zc3h12b	81	55.102

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000039981	Zc3h12d	100	63.803	ENSG00000178199	ZC3H12D	98	91.346	Homo_sapiens
ENSMUSG00000039981	Zc3h12d	50	85.714	ENSAMEG00000018283	-	100	85.714	Ailuropoda_melanoleuca
ENSMUSG00000039981	Zc3h12d	57	71.242	ENSAPLG00000008379	ZC3H12D	94	71.242	Anas_platyrhynchos
ENSMUSG00000039981	Zc3h12d	56	66.555	ENSACAG00000006984	ZC3H12D	91	66.555	Anolis_carolinensis
ENSMUSG00000039981	Zc3h12d	100	63.934	ENSANAG00000020234	ZC3H12D	100	65.306	Aotus_nancymaae
ENSMUSG00000039981	Zc3h12d	99	60.323	ENSBTAG00000007388	ZC3H12D	99	60.323	Bos_taurus
ENSMUSG00000039981	Zc3h12d	100	64.286	ENSCJAG00000019606	ZC3H12D	89	77.483	Callithrix_jacchus
ENSMUSG00000039981	Zc3h12d	50	84.644	ENSCAFG00000000375	ZC3H12D	69	84.644	Canis_familiaris
ENSMUSG00000039981	Zc3h12d	99	60.286	ENSCHIG00000025964	ZC3H12D	99	60.286	Capra_hircus
ENSMUSG00000039981	Zc3h12d	95	57.730	ENSCAPG00000014473	ZC3H12D	99	57.730	Cavia_aperea
ENSMUSG00000039981	Zc3h12d	95	63.601	ENSCPOG00000014608	ZC3H12D	99	63.601	Cavia_porcellus
ENSMUSG00000039981	Zc3h12d	100	62.795	ENSCCAG00000013595	ZC3H12D	87	76.159	Cebus_capucinus
ENSMUSG00000039981	Zc3h12d	100	63.553	ENSCATG00000038224	ZC3H12D	89	76.821	Cercocebus_atys
ENSMUSG00000039981	Zc3h12d	95	65.020	ENSCLAG00000002831	ZC3H12D	99	65.217	Chinchilla_lanigera
ENSMUSG00000039981	Zc3h12d	99	62.591	ENSCSAG00000017217	ZC3H12D	99	62.591	Chlorocebus_sabaeus
ENSMUSG00000039981	Zc3h12d	100	62.637	ENSCANG00000028774	ZC3H12D	89	76.821	Colobus_angolensis_palliatus
ENSMUSG00000039981	Zc3h12d	100	81.227	ENSCGRG00001019159	Zc3h12d	100	81.227	Cricetulus_griseus_chok1gshd
ENSMUSG00000039981	Zc3h12d	100	81.227	ENSCGRG00000006178	Zc3h12d	100	81.227	Cricetulus_griseus_crigri
ENSMUSG00000039981	Zc3h12d	57	83.280	ENSDORG00000027483	-	99	83.280	Dipodomys_ordii
ENSMUSG00000039981	Zc3h12d	84	66.170	ENSEASG00005008940	ZC3H12D	79	82.759	Equus_asinus_asinus
ENSMUSG00000039981	Zc3h12d	100	62.321	ENSECAG00000017135	ZC3H12D	98	62.679	Equus_caballus
ENSMUSG00000039981	Zc3h12d	85	75.497	ENSEEUG00000000087	-	84	75.497	Erinaceus_europaeus
ENSMUSG00000039981	Zc3h12d	99	63.119	ENSFCAG00000011290	ZC3H12D	94	76.774	Felis_catus
ENSMUSG00000039981	Zc3h12d	58	72.168	ENSFALG00000013127	ZC3H12D	98	72.168	Ficedula_albicollis
ENSMUSG00000039981	Zc3h12d	54	86.111	ENSFDAG00000000874	ZC3H12D	74	86.111	Fukomys_damarensis
ENSMUSG00000039981	Zc3h12d	100	63.985	ENSGGOG00000005511	ZC3H12D	89	77.483	Gorilla_gorilla
ENSMUSG00000039981	Zc3h12d	100	72.472	ENSSTOG00000013975	ZC3H12D	100	72.472	Ictidomys_tridecemlineatus
ENSMUSG00000039981	Zc3h12d	56	65.657	ENSLACG00000016816	ZC3H12D	94	65.657	Latimeria_chalumnae
ENSMUSG00000039981	Zc3h12d	59	81.587	ENSLAFG00000021535	-	98	81.587	Loxodonta_africana
ENSMUSG00000039981	Zc3h12d	100	63.370	ENSMFAG00000034693	ZC3H12D	89	76.159	Macaca_fascicularis
ENSMUSG00000039981	Zc3h12d	100	63.139	ENSMNEG00000004043	ZC3H12D	89	76.159	Macaca_nemestrina
ENSMUSG00000039981	Zc3h12d	57	68.954	ENSMGAG00000012594	ZC3H12D	95	68.954	Meleagris_gallopavo
ENSMUSG00000039981	Zc3h12d	100	64.234	ENSMICG00000044838	ZC3H12D	100	64.781	Microcebus_murinus
ENSMUSG00000039981	Zc3h12d	100	80.748	ENSMOCG00000015590	Zc3h12d	100	80.748	Microtus_ochrogaster
ENSMUSG00000039981	Zc3h12d	56	78.738	ENSMODG00000016829	-	95	78.738	Monodelphis_domestica
ENSMUSG00000039981	Zc3h12d	100	94.559	MGP_CAROLIEiJ_G0015104	Zc3h12d	100	94.559	Mus_caroli
ENSMUSG00000039981	Zc3h12d	100	91.557	MGP_PahariEiJ_G0023723	Zc3h12d	100	91.557	Mus_pahari
ENSMUSG00000039981	Zc3h12d	100	97.561	MGP_SPRETEiJ_G0015911	Zc3h12d	100	97.561	Mus_spretus
ENSMUSG00000039981	Zc3h12d	51	82.482	ENSMPUG00000018072	-	99	82.482	Mustela_putorius_furo
ENSMUSG00000039981	Zc3h12d	58	83.226	ENSMLUG00000029238	ZC3H12D	99	83.226	Myotis_lucifugus
ENSMUSG00000039981	Zc3h12d	92	64.848	ENSNGAG00000010502	Zc3h12d	97	64.848	Nannospalax_galili
ENSMUSG00000039981	Zc3h12d	95	63.793	ENSNLEG00000015313	-	89	76.821	Nomascus_leucogenys
ENSMUSG00000039981	Zc3h12d	53	78.014	ENSMEUG00000004686	-	99	78.014	Notamacropus_eugenii
ENSMUSG00000039981	Zc3h12d	100	61.049	ENSOPRG00000014034	ZC3H12D	100	62.172	Ochotona_princeps
ENSMUSG00000039981	Zc3h12d	89	65.618	ENSODEG00000002553	ZC3H12D	91	65.828	Octodon_degus
ENSMUSG00000039981	Zc3h12d	50	86.466	ENSOCUG00000007690	-	85	86.466	Oryctolagus_cuniculus
ENSMUSG00000039981	Zc3h12d	99	61.808	ENSOGAG00000031025	ZC3H12D	99	61.808	Otolemur_garnettii
ENSMUSG00000039981	Zc3h12d	95	57.926	ENSOARG00000002626	ZC3H12D	99	57.926	Ovis_aries
ENSMUSG00000039981	Zc3h12d	100	64.168	ENSPPAG00000041304	ZC3H12D	89	77.483	Pan_paniscus
ENSMUSG00000039981	Zc3h12d	99	60.550	ENSPPRG00000004536	ZC3H12D	94	76.129	Panthera_pardus
ENSMUSG00000039981	Zc3h12d	100	64.168	ENSPTRG00000050357	ZC3H12D	89	77.483	Pan_troglodytes
ENSMUSG00000039981	Zc3h12d	100	63.553	ENSPANG00000034987	ZC3H12D	89	76.821	Papio_anubis
ENSMUSG00000039981	Zc3h12d	55	68.562	ENSPSIG00000016475	ZC3H12D	97	68.562	Pelodiscus_sinensis
ENSMUSG00000039981	Zc3h12d	100	80.374	ENSPEMG00000010962	Zc3h12d	100	80.374	Peromyscus_maniculatus_bairdii
ENSMUSG00000039981	Zc3h12d	100	64.991	ENSPPYG00000017087	ZC3H12D	100	64.991	Pongo_abelii
ENSMUSG00000039981	Zc3h12d	100	54.545	ENSPCAG00000002991	ZC3H12D	100	54.545	Procavia_capensis
ENSMUSG00000039981	Zc3h12d	100	63.636	ENSPCOG00000017645	ZC3H12D	100	63.636	Propithecus_coquereli
ENSMUSG00000039981	Zc3h12d	100	86.304	ENSRNOG00000016041	Zc3h12d	100	86.304	Rattus_norvegicus
ENSMUSG00000039981	Zc3h12d	100	61.931	ENSRBIG00000012478	ZC3H12D	89	76.159	Rhinopithecus_bieti
ENSMUSG00000039981	Zc3h12d	100	61.931	ENSRROG00000038053	ZC3H12D	89	76.159	Rhinopithecus_roxellana
ENSMUSG00000039981	Zc3h12d	100	63.620	ENSSBOG00000023337	ZC3H12D	89	76.821	Saimiri_boliviensis_boliviensis
ENSMUSG00000039981	Zc3h12d	58	77.597	ENSSHAG00000017000	ZC3H12D	62	74.847	Sarcophilus_harrisii
ENSMUSG00000039981	Zc3h12d	100	60.550	ENSSSCG00000004109	ZC3H12D	98	60.550	Sus_scrofa
ENSMUSG00000039981	Zc3h12d	58	69.551	ENSTGUG00000010664	ZC3H12D	98	69.551	Taeniopygia_guttata
ENSMUSG00000039981	Zc3h12d	58	79.545	ENSTBEG00000000892	-	99	79.545	Tupaia_belangeri

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000932	P-body	-	ISO	Component
GO:0003674	molecular_function	-	ND	Function
GO:0004518	nuclease activity	-	IEA	Function
GO:0004519	endonuclease activity	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0006402	mRNA catabolic process	24415781.	IMP	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0030308	negative regulation of cell growth	-	ISO	Process
GO:0036464	cytoplasmic ribonucleoprotein granule	-	ISO	Component
GO:0042130	negative regulation of T cell proliferation	24415781.	IMP	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0061158	3'-UTR-mediated mRNA destabilization	26134560.	IDA	Process
GO:2000134	negative regulation of G1/S transition of mitotic cell cycle	-	ISO	Process