EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000040112 (Gene tree)
Gene ID: 232536
Gene Symbol: Mrps35
Alias: MDSO23|MRP-S28|MRPS28
Full Name: mitochondrial ribosomal protein S35
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 31228 bases
Position: chr6:147042764-147073991
Accession: 2385255
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000048348	MRP-S28	PF10213.9	1e-18	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000137556	-	331	-	ENSMUSP00000144920	85 (aa)	-	A0A0N4SV23
ENSMUST00000143204	-	573	-	-	- (aa)	-	-
ENSMUST00000036111	-	4162	XM_006507035	ENSMUSP00000048348	320 (aa)	XP_006507098	A0A0R4J0L6
ENSMUST00000123139	-	467	-	-	- (aa)	-	-
ENSMUST00000149660	-	4607	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000040112's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000040112's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000040112	Mrps35	93	62.876	ENSAPOG00000008300	mrps35	90	63.211	Acanthochromis_polyacanthus
ENSMUSG00000040112	Mrps35	96	78.778	ENSAMEG00000011553	MRPS35	99	77.778	Ailuropoda_melanoleuca
ENSMUSG00000040112	Mrps35	89	64.460	ENSACIG00000018701	mrps35	91	63.279	Amphilophus_citrinellus
ENSMUSG00000040112	Mrps35	95	61.111	ENSAOCG00000006741	mrps35	97	58.095	Amphiprion_ocellaris
ENSMUSG00000040112	Mrps35	95	61.111	ENSAPEG00000007022	mrps35	91	61.438	Amphiprion_percula
ENSMUSG00000040112	Mrps35	91	65.292	ENSATEG00000019646	mrps35	89	67.658	Anabas_testudineus
ENSMUSG00000040112	Mrps35	84	71.375	ENSAPLG00000013383	MRPS35	99	71.375	Anas_platyrhynchos
ENSMUSG00000040112	Mrps35	59	68.783	ENSACAG00000004291	-	85	68.783	Anolis_carolinensis
ENSMUSG00000040112	Mrps35	84	77.778	ENSANAG00000025188	MRPS35	99	75.874	Aotus_nancymaae
ENSMUSG00000040112	Mrps35	95	60.984	ENSACLG00000026388	mrps35	91	60.984	Astatotilapia_calliptera
ENSMUSG00000040112	Mrps35	93	62.126	ENSAMXG00000015124	mrps35	84	62.126	Astyanax_mexicanus
ENSMUSG00000040112	Mrps35	99	75.617	ENSBTAG00000006369	MRPS35	99	75.617	Bos_taurus
ENSMUSG00000040112	Mrps35	91	39.322	WBGene00012697	mrps-35	99	30.667	Caenorhabditis_elegans
ENSMUSG00000040112	Mrps35	95	78.176	ENSCJAG00000043200	MRPS35	99	76.708	Callithrix_jacchus
ENSMUSG00000040112	Mrps35	99	79.012	ENSCAFG00000010963	MRPS35	99	79.012	Canis_familiaris
ENSMUSG00000040112	Mrps35	99	79.012	ENSCAFG00020013510	MRPS35	99	79.012	Canis_lupus_dingo
ENSMUSG00000040112	Mrps35	99	76.543	ENSCHIG00000025620	-	99	76.543	Capra_hircus
ENSMUSG00000040112	Mrps35	99	72.840	ENSCHIG00000016426	-	99	72.840	Capra_hircus
ENSMUSG00000040112	Mrps35	99	77.882	ENSTSYG00000003293	MRPS35	99	77.882	Carlito_syrichta
ENSMUSG00000040112	Mrps35	88	80.565	ENSCPOG00000010714	MRPS35	98	80.565	Cavia_porcellus
ENSMUSG00000040112	Mrps35	99	75.389	ENSCCAG00000026788	MRPS35	99	75.389	Cebus_capucinus
ENSMUSG00000040112	Mrps35	99	76.398	ENSCATG00000019666	MRPS35	99	76.398	Cercocebus_atys
ENSMUSG00000040112	Mrps35	99	79.751	ENSCLAG00000000691	MRPS35	99	79.751	Chinchilla_lanigera
ENSMUSG00000040112	Mrps35	83	81.061	ENSCSAG00000007584	MRPS35	100	81.061	Chlorocebus_sabaeus
ENSMUSG00000040112	Mrps35	51	91.667	ENSCHOG00000005015	-	72	91.667	Choloepus_hoffmanni
ENSMUSG00000040112	Mrps35	96	65.723	ENSCPBG00000000621	MRPS35	91	65.723	Chrysemys_picta_bellii
ENSMUSG00000040112	Mrps35	81	44.981	ENSCING00000005753	-	94	44.981	Ciona_intestinalis
ENSMUSG00000040112	Mrps35	81	43.494	ENSCSAVG00000009395	-	80	43.494	Ciona_savignyi
ENSMUSG00000040112	Mrps35	99	77.019	ENSCANG00000028913	MRPS35	99	77.019	Colobus_angolensis_palliatus
ENSMUSG00000040112	Mrps35	100	87.227	ENSCGRG00001019645	Mrps35	100	87.227	Cricetulus_griseus_chok1gshd
ENSMUSG00000040112	Mrps35	89	89.123	ENSCGRG00000005952	Mrps35	100	89.123	Cricetulus_griseus_crigri
ENSMUSG00000040112	Mrps35	99	57.764	ENSCSEG00000009276	mrps35	96	57.764	Cynoglossus_semilaevis
ENSMUSG00000040112	Mrps35	84	65.799	ENSCVAG00000000647	mrps35	90	62.333	Cyprinodon_variegatus
ENSMUSG00000040112	Mrps35	91	62.543	ENSDARG00000038456	mrps35	87	62.543	Danio_rerio
ENSMUSG00000040112	Mrps35	85	78.755	ENSDNOG00000003068	MRPS35	84	78.755	Dasypus_novemcinctus
ENSMUSG00000040112	Mrps35	88	81.272	ENSDORG00000003486	Mrps35	99	81.272	Dipodomys_ordii
ENSMUSG00000040112	Mrps35	84	48.162	FBgn0035374	mRpS35	80	48.162	Drosophila_melanogaster
ENSMUSG00000040112	Mrps35	100	75.767	ENSETEG00000005034	MRPS35	100	75.767	Echinops_telfairi
ENSMUSG00000040112	Mrps35	68	60.829	ENSEBUG00000006842	mrps35	95	60.829	Eptatretus_burgeri
ENSMUSG00000040112	Mrps35	99	78.395	ENSEASG00005006645	MRPS35	99	78.395	Equus_asinus_asinus
ENSMUSG00000040112	Mrps35	99	78.086	ENSECAG00000010929	MRPS35	99	78.086	Equus_caballus
ENSMUSG00000040112	Mrps35	100	65.031	ENSEEUG00000008229	MRPS35	100	65.031	Erinaceus_europaeus
ENSMUSG00000040112	Mrps35	84	64.312	ENSELUG00000008083	mrps35	90	60.328	Esox_lucius
ENSMUSG00000040112	Mrps35	99	77.329	ENSFCAG00000029524	MRPS35	99	77.329	Felis_catus
ENSMUSG00000040112	Mrps35	82	72.243	ENSFALG00000004625	MRPS35	99	72.243	Ficedula_albicollis
ENSMUSG00000040112	Mrps35	90	80.903	ENSFDAG00000007336	MRPS35	100	80.903	Fukomys_damarensis
ENSMUSG00000040112	Mrps35	93	61.130	ENSFHEG00000002470	mrps35	88	61.462	Fundulus_heteroclitus
ENSMUSG00000040112	Mrps35	84	62.230	ENSGMOG00000004718	mrps35	86	62.230	Gadus_morhua
ENSMUSG00000040112	Mrps35	96	65.506	ENSGALG00000036730	MRPS35	80	65.506	Gallus_gallus
ENSMUSG00000040112	Mrps35	84	62.825	ENSGAFG00000003842	mrps35	91	58.689	Gambusia_affinis
ENSMUSG00000040112	Mrps35	99	58.025	ENSGACG00000003757	mrps35	96	58.025	Gasterosteus_aculeatus
ENSMUSG00000040112	Mrps35	86	72.263	ENSGAGG00000017587	MRPS35	80	72.263	Gopherus_agassizii
ENSMUSG00000040112	Mrps35	99	75.155	ENSGGOG00000003193	MRPS35	99	75.155	Gorilla_gorilla
ENSMUSG00000040112	Mrps35	93	62.000	ENSHBUG00000014651	mrps35	89	62.000	Haplochromis_burtoni
ENSMUSG00000040112	Mrps35	99	75.692	ENSHGLG00000001828	-	99	75.692	Heterocephalus_glaber_female
ENSMUSG00000040112	Mrps35	99	71.517	ENSHGLG00000020219	-	93	71.517	Heterocephalus_glaber_female
ENSMUSG00000040112	Mrps35	99	69.846	ENSHGLG00000015265	-	96	69.846	Heterocephalus_glaber_female
ENSMUSG00000040112	Mrps35	96	65.924	ENSHGLG00000009273	-	98	65.924	Heterocephalus_glaber_female
ENSMUSG00000040112	Mrps35	99	75.692	ENSHGLG00100011411	-	99	75.692	Heterocephalus_glaber_male
ENSMUSG00000040112	Mrps35	99	72.100	ENSHGLG00100002513	-	99	72.100	Heterocephalus_glaber_male
ENSMUSG00000040112	Mrps35	93	61.279	ENSHCOG00000004614	mrps35	88	61.279	Hippocampus_comes
ENSMUSG00000040112	Mrps35	95	64.262	ENSIPUG00000011432	mrps35	100	56.627	Ictalurus_punctatus
ENSMUSG00000040112	Mrps35	100	66.875	ENSSTOG00000011940	-	100	66.875	Ictidomys_tridecemlineatus
ENSMUSG00000040112	Mrps35	88	78.292	ENSJJAG00000010633	Mrps35	98	78.292	Jaculus_jaculus
ENSMUSG00000040112	Mrps35	88	62.898	ENSKMAG00000017026	mrps35	85	62.898	Kryptolebias_marmoratus
ENSMUSG00000040112	Mrps35	93	60.943	ENSLBEG00000022639	mrps35	89	60.943	Labrus_bergylta
ENSMUSG00000040112	Mrps35	97	62.500	ENSLOCG00000016692	mrps35	91	62.500	Lepisosteus_oculatus
ENSMUSG00000040112	Mrps35	85	81.985	ENSLAFG00000010490	MRPS35	100	81.985	Loxodonta_africana
ENSMUSG00000040112	Mrps35	99	77.329	ENSMFAG00000030289	MRPS35	99	77.329	Macaca_fascicularis
ENSMUSG00000040112	Mrps35	99	77.019	ENSMMUG00000047645	MRPS35	99	77.019	Macaca_mulatta
ENSMUSG00000040112	Mrps35	99	77.329	ENSMNEG00000043409	MRPS35	99	77.329	Macaca_nemestrina
ENSMUSG00000040112	Mrps35	99	77.019	ENSMLEG00000014861	MRPS35	99	77.019	Mandrillus_leucophaeus
ENSMUSG00000040112	Mrps35	95	60.984	ENSMAMG00000023147	mrps35	91	60.984	Mastacembelus_armatus
ENSMUSG00000040112	Mrps35	95	61.311	ENSMZEG00005010120	mrps35	91	61.311	Maylandia_zebra
ENSMUSG00000040112	Mrps35	84	71.481	ENSMGAG00000013862	MRPS35	99	71.481	Meleagris_gallopavo
ENSMUSG00000040112	Mrps35	95	77.377	ENSMICG00000032618	-	96	76.510	Microcebus_murinus
ENSMUSG00000040112	Mrps35	96	79.805	ENSMICG00000017686	-	99	78.997	Microcebus_murinus
ENSMUSG00000040112	Mrps35	100	86.250	ENSMOCG00000000925	Mrps35	100	86.250	Microtus_ochrogaster
ENSMUSG00000040112	Mrps35	85	64.469	ENSMMOG00000001035	mrps35	87	64.469	Mola_mola
ENSMUSG00000040112	Mrps35	100	69.018	ENSMODG00000014424	MRPS35	85	69.018	Monodelphis_domestica
ENSMUSG00000040112	Mrps35	93	61.667	ENSMALG00000013767	mrps35	91	62.000	Monopterus_albus
ENSMUSG00000040112	Mrps35	100	97.188	MGP_CAROLIEiJ_G0029064	Mrps35	100	97.188	Mus_caroli
ENSMUSG00000040112	Mrps35	100	98.750	MGP_SPRETEiJ_G0030119	Mrps35	100	98.750	Mus_spretus
ENSMUSG00000040112	Mrps35	99	66.358	ENSMPUG00000005878	-	99	66.358	Mustela_putorius_furo
ENSMUSG00000040112	Mrps35	99	77.846	ENSMLUG00000003279	MRPS35	99	77.846	Myotis_lucifugus
ENSMUSG00000040112	Mrps35	89	80.139	ENSNGAG00000000169	Mrps35	97	80.139	Nannospalax_galili
ENSMUSG00000040112	Mrps35	95	61.639	ENSNBRG00000018774	mrps35	91	61.639	Neolamprologus_brichardi
ENSMUSG00000040112	Mrps35	99	75.155	ENSNLEG00000036292	MRPS35	99	75.155	Nomascus_leucogenys
ENSMUSG00000040112	Mrps35	99	56.211	ENSOPRG00000007903	MRPS35	99	56.211	Ochotona_princeps
ENSMUSG00000040112	Mrps35	85	80.882	ENSODEG00000006203	MRPS35	94	80.882	Octodon_degus
ENSMUSG00000040112	Mrps35	95	62.295	ENSONIG00000008827	mrps35	91	62.295	Oreochromis_niloticus
ENSMUSG00000040112	Mrps35	84	74.265	ENSOANG00000010504	MRPS35	93	74.265	Ornithorhynchus_anatinus
ENSMUSG00000040112	Mrps35	99	76.235	ENSOCUG00000016214	MRPS35	99	76.235	Oryctolagus_cuniculus
ENSMUSG00000040112	Mrps35	96	58.521	ENSORLG00000024981	mrps35	92	58.521	Oryzias_latipes
ENSMUSG00000040112	Mrps35	96	58.521	ENSORLG00020019856	mrps35	92	58.521	Oryzias_latipes_hni
ENSMUSG00000040112	Mrps35	95	59.211	ENSORLG00015012791	mrps35	89	59.211	Oryzias_latipes_hsok
ENSMUSG00000040112	Mrps35	88	61.566	ENSOMEG00000007741	mrps35	91	61.566	Oryzias_melastigma
ENSMUSG00000040112	Mrps35	96	78.387	ENSOGAG00000010630	MRPS35	99	77.329	Otolemur_garnettii
ENSMUSG00000040112	Mrps35	99	76.235	ENSOARG00000019704	MRPS35	99	76.235	Ovis_aries
ENSMUSG00000040112	Mrps35	99	75.155	ENSPPAG00000024107	-	99	75.155	Pan_paniscus
ENSMUSG00000040112	Mrps35	99	75.466	ENSPPAG00000008983	-	99	75.466	Pan_paniscus
ENSMUSG00000040112	Mrps35	99	77.329	ENSPPRG00000022747	MRPS35	99	77.329	Panthera_pardus
ENSMUSG00000040112	Mrps35	88	82.206	ENSPTIG00000016892	MRPS35	99	80.272	Panthera_tigris_altaica
ENSMUSG00000040112	Mrps35	99	75.466	ENSPTRG00000004792	MRPS35	99	75.466	Pan_troglodytes
ENSMUSG00000040112	Mrps35	99	76.708	ENSPANG00000004580	MRPS35	99	76.708	Papio_anubis
ENSMUSG00000040112	Mrps35	95	60.726	ENSPKIG00000007441	mrps35	100	60.726	Paramormyrops_kingsleyae
ENSMUSG00000040112	Mrps35	84	72.015	ENSPSIG00000006351	MRPS35	98	72.015	Pelodiscus_sinensis
ENSMUSG00000040112	Mrps35	93	61.873	ENSPMGG00000005809	mrps35	91	61.333	Periophthalmus_magnuspinnatus
ENSMUSG00000040112	Mrps35	100	90.000	ENSPEMG00000005515	Mrps35	100	90.000	Peromyscus_maniculatus_bairdii
ENSMUSG00000040112	Mrps35	99	66.154	ENSPCIG00000008273	-	99	66.154	Phascolarctos_cinereus
ENSMUSG00000040112	Mrps35	94	55.049	ENSPCIG00000016492	-	78	55.049	Phascolarctos_cinereus
ENSMUSG00000040112	Mrps35	95	58.361	ENSPFOG00000012166	mrps35	91	58.361	Poecilia_formosa
ENSMUSG00000040112	Mrps35	93	58.923	ENSPLAG00000005985	mrps35	89	58.923	Poecilia_latipinna
ENSMUSG00000040112	Mrps35	93	58.586	ENSPMEG00000015699	mrps35	89	58.586	Poecilia_mexicana
ENSMUSG00000040112	Mrps35	99	55.031	ENSPREG00000019306	mrps35	95	55.031	Poecilia_reticulata
ENSMUSG00000040112	Mrps35	74	76.763	ENSPPYG00000004383	-	99	76.763	Pongo_abelii
ENSMUSG00000040112	Mrps35	100	75.692	ENSPCAG00000004150	MRPS35	100	75.692	Procavia_capensis
ENSMUSG00000040112	Mrps35	96	71.383	ENSPVAG00000016544	MRPS35	99	70.405	Pteropus_vampyrus
ENSMUSG00000040112	Mrps35	95	61.639	ENSPNYG00000007276	mrps35	91	61.639	Pundamilia_nyererei
ENSMUSG00000040112	Mrps35	95	63.399	ENSPNAG00000024495	mrps35	91	63.399	Pygocentrus_nattereri
ENSMUSG00000040112	Mrps35	100	93.750	ENSRNOG00000001842	Mrps35	100	93.750	Rattus_norvegicus
ENSMUSG00000040112	Mrps35	89	77.972	ENSRBIG00000027610	MRPS35	85	77.972	Rhinopithecus_bieti
ENSMUSG00000040112	Mrps35	95	78.571	ENSRROG00000042830	MRPS35	99	77.329	Rhinopithecus_roxellana
ENSMUSG00000040112	Mrps35	99	76.324	ENSSBOG00000031588	MRPS35	99	76.324	Saimiri_boliviensis_boliviensis
ENSMUSG00000040112	Mrps35	89	66.438	ENSSFOG00015002462	mrps35	88	66.438	Scleropages_formosus
ENSMUSG00000040112	Mrps35	86	62.182	ENSSMAG00000006888	mrps35	82	62.545	Scophthalmus_maximus
ENSMUSG00000040112	Mrps35	84	62.731	ENSSDUG00000023352	mrps35	79	62.731	Seriola_dumerili
ENSMUSG00000040112	Mrps35	95	61.967	ENSSLDG00000023837	mrps35	91	61.967	Seriola_lalandi_dorsalis
ENSMUSG00000040112	Mrps35	96	64.706	ENSSPUG00000018562	MRPS35	97	69.343	Sphenodon_punctatus
ENSMUSG00000040112	Mrps35	93	59.933	ENSSPAG00000012617	mrps35	89	60.269	Stegastes_partitus
ENSMUSG00000040112	Mrps35	100	77.231	ENSSSCG00000000547	MRPS35	89	77.231	Sus_scrofa
ENSMUSG00000040112	Mrps35	85	71.956	ENSTGUG00000012692	-	99	71.956	Taeniopygia_guttata
ENSMUSG00000040112	Mrps35	93	59.197	ENSTRUG00000016486	mrps35	79	59.532	Takifugu_rubripes
ENSMUSG00000040112	Mrps35	88	65.018	ENSTNIG00000003413	mrps35	84	65.371	Tetraodon_nigroviridis
ENSMUSG00000040112	Mrps35	96	70.227	ENSTBEG00000000314	MRPS35	99	69.255	Tupaia_belangeri
ENSMUSG00000040112	Mrps35	99	77.019	ENSTTRG00000012432	MRPS35	99	77.019	Tursiops_truncatus
ENSMUSG00000040112	Mrps35	95	78.065	ENSUAMG00000024912	MRPS35	99	76.852	Ursus_americanus
ENSMUSG00000040112	Mrps35	95	68.710	ENSUMAG00000001347	MRPS35	98	68.710	Ursus_maritimus
ENSMUSG00000040112	Mrps35	88	67.845	ENSVPAG00000012174	MRPS35	99	67.845	Vicugna_pacos
ENSMUSG00000040112	Mrps35	99	78.704	ENSVVUG00000030237	MRPS35	99	78.704	Vulpes_vulpes
ENSMUSG00000040112	Mrps35	97	49.521	ENSXETG00000001312	mrps35	93	49.521	Xenopus_tropicalis
ENSMUSG00000040112	Mrps35	84	63.197	ENSXCOG00000020893	mrps35	89	63.197	Xiphophorus_couchianus
ENSMUSG00000040112	Mrps35	86	61.455	ENSXMAG00000023627	mrps35	91	58.361	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005763	mitochondrial small ribosomal subunit	21873635.	IBA	Component
GO:0005840	ribosome	-	IEA	Component
GO:0008150	biological_process	-	ND	Process
GO:0032543	mitochondrial translation	-	IEA	Process