EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000040225 (Gene tree)
Gene ID: 226562
Gene Symbol: Prrc2c
Alias: 1810043M20Rik|9630039I18Rik|Bat2d|Bat2l2
Full Name: proline-rich coiled-coil 2C
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 69832
Position: chr1: 162670725-162740556
Accession: 1913754
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000182535	-	593	-	-	- (aa)	-	-
ENSMUST00000028016	-	8815	XM_006496767	ENSMUSP00000028016	2844 (aa)	XP_006496830	A0A0A0MQ79
ENSMUST00000182331	-	670	-	ENSMUSP00000138556	149 (aa)	-	S4R298
ENSMUST00000182660	-	11502	XM_006496766	ENSMUSP00000138433	2846 (aa)	XP_006496829	Q3TLH4
ENSMUST00000182288	-	1342	-	-	- (aa)	-	-
ENSMUST00000182308	-	548	-	-	- (aa)	-	-
ENSMUST00000183223	-	5448	-	ENSMUSP00000138698	1276 (aa)	-	S4R2L9
ENSMUST00000182593	-	9022	XM_006496771	ENSMUSP00000138674	2765 (aa)	XP_006496834	S4R2J9
ENSMUST00000183286	-	342	-	-	- (aa)	-	-
ENSMUST00000183011	-	1827	XM_011238786	ENSMUSP00000138609	564 (aa)	XP_011237088	S4R2E2
ENSMUST00000182149	-	11289	XM_006496770	ENSMUSP00000138548	2724 (aa)	XP_006496833	S4R294
ENSMUST00000182393	-	6367	-	ENSMUSP00000138451	1515 (aa)	-	S4R209
ENSMUST00000182448	-	1215	-	-	- (aa)	-	-
ENSMUST00000193937	-	2105	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000040225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000040225's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000040225	Prrc2c	99	71.698	ENSDARG00000057583	prrc2c	55	61.506	Danio_rerio
ENSMUSG00000040225	Prrc2c	100	57.222	ENSDARG00000031494	prrc2a	81	73.750	Danio_rerio
ENSMUSG00000040225	Prrc2c	100	95.455	ENSG00000117523	PRRC2C	99	95.238	Homo_sapiens
ENSMUSG00000040225	Prrc2c	100	47.802	ENSG00000130723	PRRC2B	100	57.895	Homo_sapiens
ENSMUSG00000040225	Prrc2c	100	48.066	ENSMUSG00000039262	Prrc2b	90	45.556	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002244	hematopoietic progenitor cell differentiation	21873635.	IBA	Process
GO:0002244	hematopoietic progenitor cell differentiation	24029230.	IGI	Process
GO:0005829	cytosol	-	ISO	Component
GO:0008022	protein C-terminus binding	-	ISO	Function