EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000040354 (Gene tree)
Gene ID: 216443
Gene Symbol: Mars
Alias: MetRS|methionine tRNA ligase|methionyl-tRNA synthetase
Full Name: methionine-tRNA synthetase
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 15566 bases
Position: chr10:127296221-127311786
Accession: 1345633
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000037446	tRNA-synt_1g	PF09334.11	2.2e-146	1	1
ENSMUSP00000130666	tRNA-synt_1g	PF09334.11	2.2e-146	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000037290	-	2939	-	ENSMUSP00000037446	902 (aa)	-	Q68FL6
ENSMUST00000134778	-	621	-	ENSMUSP00000118031	184 (aa)	-	F6W0G8
ENSMUST00000139683	-	467	-	-	- (aa)	-	-
ENSMUST00000128369	-	574	-	-	- (aa)	-	-
ENSMUST00000171564	-	2962	XM_006513568	ENSMUSP00000130666	910 (aa)	XP_006513631	E9QB02
ENSMUST00000145275	-	3065	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000040354's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00450	Selenocompound metabolism	KEGG
mmu00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000040354's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000040354	Mars	100	89.468	ENSG00000166986	MARS	100	89.468	Homo_sapiens
ENSMUSG00000040354	Mars	100	62.378	ENSAPOG00000020238	mars	100	62.907	Acanthochromis_polyacanthus
ENSMUSG00000040354	Mars	100	89.690	ENSAMEG00000004962	MARS	100	89.690	Ailuropoda_melanoleuca
ENSMUSG00000040354	Mars	99	63.646	ENSACIG00000016271	mars	100	66.307	Amphilophus_citrinellus
ENSMUSG00000040354	Mars	100	62.352	ENSAOCG00000011411	mars	100	62.907	Amphiprion_ocellaris
ENSMUSG00000040354	Mars	100	62.229	ENSAPEG00000008610	mars	100	62.798	Amphiprion_percula
ENSMUSG00000040354	Mars	99	62.054	ENSATEG00000025019	mars	100	61.905	Anabas_testudineus
ENSMUSG00000040354	Mars	93	70.843	ENSAPLG00000014821	MARS	100	70.877	Anas_platyrhynchos
ENSMUSG00000040354	Mars	99	66.740	ENSACAG00000006698	MARS	99	66.556	Anolis_carolinensis
ENSMUSG00000040354	Mars	100	89.416	ENSANAG00000027589	MARS	100	89.416	Aotus_nancymaae
ENSMUSG00000040354	Mars	99	62.907	ENSACLG00000018937	mars	100	62.798	Astatotilapia_calliptera
ENSMUSG00000040354	Mars	99	63.617	ENSAMXG00000017335	mars	100	61.800	Astyanax_mexicanus
ENSMUSG00000040354	Mars	100	89.024	ENSBTAG00000018405	MARS	100	89.024	Bos_taurus
ENSMUSG00000040354	Mars	73	54.247	WBGene00003415	mars-1	89	57.947	Caenorhabditis_elegans
ENSMUSG00000040354	Mars	100	89.024	ENSCJAG00000007249	MARS	100	89.024	Callithrix_jacchus
ENSMUSG00000040354	Mars	100	89.579	ENSCAFG00000000229	MARS	100	89.800	Canis_familiaris
ENSMUSG00000040354	Mars	100	89.579	ENSCAFG00020023661	MARS	100	89.800	Canis_lupus_dingo
ENSMUSG00000040354	Mars	100	88.692	ENSCHIG00000027023	MARS	100	88.692	Capra_hircus
ENSMUSG00000040354	Mars	100	88.692	ENSTSYG00000005193	MARS	100	88.692	Carlito_syrichta
ENSMUSG00000040354	Mars	83	81.110	ENSCAPG00000014448	MARS	99	81.110	Cavia_aperea
ENSMUSG00000040354	Mars	100	87.694	ENSCPOG00000012866	MARS	100	87.694	Cavia_porcellus
ENSMUSG00000040354	Mars	100	89.670	ENSCCAG00000032206	MARS	100	89.670	Cebus_capucinus
ENSMUSG00000040354	Mars	100	89.341	ENSCATG00000038907	MARS	100	89.341	Cercocebus_atys
ENSMUSG00000040354	Mars	97	89.294	ENSCLAG00000012164	MARS	99	89.269	Chinchilla_lanigera
ENSMUSG00000040354	Mars	100	88.436	ENSCSAG00000004852	MARS	100	88.436	Chlorocebus_sabaeus
ENSMUSG00000040354	Mars	100	66.520	ENSCPBG00000017136	MARS	100	66.520	Chrysemys_picta_bellii
ENSMUSG00000040354	Mars	72	60.836	ENSCING00000018550	-	99	60.746	Ciona_intestinalis
ENSMUSG00000040354	Mars	63	63.047	ENSCSAVG00000006145	-	98	62.872	Ciona_savignyi
ENSMUSG00000040354	Mars	100	89.724	ENSCANG00000034583	MARS	100	89.724	Colobus_angolensis_palliatus
ENSMUSG00000040354	Mars	100	92.088	ENSCGRG00001019238	Mars	100	92.088	Cricetulus_griseus_chok1gshd
ENSMUSG00000040354	Mars	100	92.088	ENSCGRG00000017321	Mars	100	92.088	Cricetulus_griseus_crigri
ENSMUSG00000040354	Mars	99	63.239	ENSCSEG00000010816	mars	99	63.428	Cynoglossus_semilaevis
ENSMUSG00000040354	Mars	99	62.555	ENSCVAG00000009314	mars	99	62.555	Cyprinodon_variegatus
ENSMUSG00000040354	Mars	100	63.428	ENSDARG00000034396	mars	97	63.210	Danio_rerio
ENSMUSG00000040354	Mars	100	87.912	ENSDNOG00000017502	MARS	100	87.912	Dasypus_novemcinctus
ENSMUSG00000040354	Mars	100	89.024	ENSDORG00000007127	Mars	100	89.024	Dipodomys_ordii
ENSMUSG00000040354	Mars	98	49.109	FBgn0034401	MetRS	82	50.462	Drosophila_melanogaster
ENSMUSG00000040354	Mars	59	86.940	ENSETEG00000007106	MARS	100	86.940	Echinops_telfairi
ENSMUSG00000040354	Mars	61	59.455	ENSEBUG00000010439	mars	88	59.455	Eptatretus_burgeri
ENSMUSG00000040354	Mars	100	89.341	ENSEASG00005007208	MARS	100	89.341	Equus_asinus_asinus
ENSMUSG00000040354	Mars	100	89.341	ENSECAG00000015175	MARS	100	89.341	Equus_caballus
ENSMUSG00000040354	Mars	89	86.408	ENSEEUG00000015503	MARS	89	86.408	Erinaceus_europaeus
ENSMUSG00000040354	Mars	100	62.541	ENSELUG00000010453	mars	100	62.541	Esox_lucius
ENSMUSG00000040354	Mars	100	90.355	ENSFCAG00000002083	MARS	100	90.355	Felis_catus
ENSMUSG00000040354	Mars	100	86.813	ENSFDAG00000010217	MARS	100	86.813	Fukomys_damarensis
ENSMUSG00000040354	Mars	99	62.581	ENSFHEG00000016374	mars	100	63.232	Fundulus_heteroclitus
ENSMUSG00000040354	Mars	99	61.555	ENSGMOG00000007987	mars	100	61.446	Gadus_morhua
ENSMUSG00000040354	Mars	92	67.913	ENSGALG00000039315	MARS	95	65.993	Gallus_gallus
ENSMUSG00000040354	Mars	99	62.432	ENSGAFG00000013461	mars	100	62.159	Gambusia_affinis
ENSMUSG00000040354	Mars	99	62.148	ENSGACG00000006474	mars	100	62.148	Gasterosteus_aculeatus
ENSMUSG00000040354	Mars	96	70.218	ENSGAGG00000011640	MARS	97	70.218	Gopherus_agassizii
ENSMUSG00000040354	Mars	100	89.468	ENSGGOG00000001982	MARS	100	89.468	Gorilla_gorilla
ENSMUSG00000040354	Mars	91	69.968	ENSHBUG00000009575	mars	95	69.968	Haplochromis_burtoni
ENSMUSG00000040354	Mars	99	75.506	ENSHGLG00000019739	-	96	75.618	Heterocephalus_glaber_female
ENSMUSG00000040354	Mars	100	89.560	ENSHGLG00000013493	MARS	100	89.560	Heterocephalus_glaber_female
ENSMUSG00000040354	Mars	100	89.560	ENSHGLG00100006885	MARS	100	89.560	Heterocephalus_glaber_male
ENSMUSG00000040354	Mars	99	74.382	ENSHGLG00100004906	-	96	74.494	Heterocephalus_glaber_male
ENSMUSG00000040354	Mars	99	61.322	ENSHCOG00000001090	mars	100	61.105	Hippocampus_comes
ENSMUSG00000040354	Mars	91	64.450	ENSIPUG00000024410	mars	98	64.286	Ictalurus_punctatus
ENSMUSG00000040354	Mars	66	71.381	ENSIPUG00000024413	mars	99	71.714	Ictalurus_punctatus
ENSMUSG00000040354	Mars	100	88.815	ENSSTOG00000001128	MARS	100	88.594	Ictidomys_tridecemlineatus
ENSMUSG00000040354	Mars	100	90.022	ENSJJAG00000018827	Mars	100	90.022	Jaculus_jaculus
ENSMUSG00000040354	Mars	99	62.987	ENSKMAG00000012408	mars	99	64.062	Kryptolebias_marmoratus
ENSMUSG00000040354	Mars	99	62.124	ENSLBEG00000013609	mars	100	62.758	Labrus_bergylta
ENSMUSG00000040354	Mars	100	69.189	ENSLACG00000018854	MARS	100	69.011	Latimeria_chalumnae
ENSMUSG00000040354	Mars	100	87.043	ENSLAFG00000013525	MARS	100	87.043	Loxodonta_africana
ENSMUSG00000040354	Mars	100	89.800	ENSMFAG00000010123	MARS	100	89.800	Macaca_fascicularis
ENSMUSG00000040354	Mars	100	90.022	ENSMMUG00000011277	MARS	100	90.022	Macaca_mulatta
ENSMUSG00000040354	Mars	100	88.398	ENSMNEG00000044464	MARS	100	88.398	Macaca_nemestrina
ENSMUSG00000040354	Mars	89	90.274	ENSMLEG00000034638	MARS	100	90.274	Mandrillus_leucophaeus
ENSMUSG00000040354	Mars	96	63.667	ENSMAMG00000010012	mars	97	63.667	Mastacembelus_armatus
ENSMUSG00000040354	Mars	99	62.690	ENSMZEG00005007092	mars	100	62.581	Maylandia_zebra
ENSMUSG00000040354	Mars	100	89.024	ENSMAUG00000011482	Mars	100	89.024	Mesocricetus_auratus
ENSMUSG00000040354	Mars	100	89.690	ENSMICG00000032056	MARS	100	89.690	Microcebus_murinus
ENSMUSG00000040354	Mars	100	92.239	ENSMOCG00000010941	Mars	100	92.239	Microtus_ochrogaster
ENSMUSG00000040354	Mars	100	61.910	ENSMMOG00000007461	mars	99	61.910	Mola_mola
ENSMUSG00000040354	Mars	99	61.848	ENSMALG00000010005	mars	99	63.297	Monopterus_albus
ENSMUSG00000040354	Mars	100	98.571	MGP_CAROLIEiJ_G0015891	Mars	100	98.571	Mus_caroli
ENSMUSG00000040354	Mars	100	97.473	MGP_PahariEiJ_G0031194	Mars	100	97.473	Mus_pahari
ENSMUSG00000040354	Mars	100	99.451	MGP_SPRETEiJ_G0016717	Mars	100	99.451	Mus_spretus
ENSMUSG00000040354	Mars	100	89.024	ENSMPUG00000001831	MARS	100	89.024	Mustela_putorius_furo
ENSMUSG00000040354	Mars	100	88.692	ENSMLUG00000001037	MARS	100	88.692	Myotis_lucifugus
ENSMUSG00000040354	Mars	100	91.131	ENSNGAG00000018824	Mars	100	91.131	Nannospalax_galili
ENSMUSG00000040354	Mars	99	64.652	ENSNBRG00000004105	mars	100	64.915	Neolamprologus_brichardi
ENSMUSG00000040354	Mars	100	90.022	ENSNLEG00000017297	MARS	100	90.022	Nomascus_leucogenys
ENSMUSG00000040354	Mars	89	80.645	ENSMEUG00000007195	MARS	100	80.318	Notamacropus_eugenii
ENSMUSG00000040354	Mars	100	85.920	ENSOPRG00000006518	MARS	100	85.920	Ochotona_princeps
ENSMUSG00000040354	Mars	100	89.024	ENSODEG00000001752	MARS	100	89.024	Octodon_degus
ENSMUSG00000040354	Mars	99	62.165	ENSONIG00000005090	mars	100	61.976	Oreochromis_niloticus
ENSMUSG00000040354	Mars	73	75.566	ENSOANG00000013318	MARS	100	75.113	Ornithorhynchus_anatinus
ENSMUSG00000040354	Mars	100	89.800	ENSOCUG00000007373	MARS	100	89.800	Oryctolagus_cuniculus
ENSMUSG00000040354	Mars	99	61.697	ENSORLG00000005405	mars	100	62.024	Oryzias_latipes
ENSMUSG00000040354	Mars	99	61.806	ENSORLG00020017397	mars	100	62.133	Oryzias_latipes_hni
ENSMUSG00000040354	Mars	99	61.806	ENSORLG00015012976	mars	100	62.133	Oryzias_latipes_hsok
ENSMUSG00000040354	Mars	99	61.455	ENSOMEG00000018411	mars	100	61.697	Oryzias_melastigma
ENSMUSG00000040354	Mars	100	88.326	ENSOGAG00000005226	MARS	100	87.665	Otolemur_garnettii
ENSMUSG00000040354	Mars	100	88.692	ENSOARG00000006477	MARS	100	88.692	Ovis_aries
ENSMUSG00000040354	Mars	100	88.132	ENSPPAG00000025147	MARS	100	88.132	Pan_paniscus
ENSMUSG00000040354	Mars	100	90.355	ENSPPRG00000023243	MARS	100	90.355	Panthera_pardus
ENSMUSG00000040354	Mars	100	90.244	ENSPTIG00000006721	MARS	100	90.244	Panthera_tigris_altaica
ENSMUSG00000040354	Mars	100	89.468	ENSPTRG00000005135	MARS	100	89.468	Pan_troglodytes
ENSMUSG00000040354	Mars	100	89.670	ENSPANG00000009140	MARS	100	89.670	Papio_anubis
ENSMUSG00000040354	Mars	99	63.319	ENSPKIG00000002833	mars	100	63.319	Paramormyrops_kingsleyae
ENSMUSG00000040354	Mars	70	48.980	ENSPSIG00000013607	MARS	100	45.298	Pelodiscus_sinensis
ENSMUSG00000040354	Mars	99	61.396	ENSPMGG00000014847	mars	99	61.069	Periophthalmus_magnuspinnatus
ENSMUSG00000040354	Mars	100	92.418	ENSPEMG00000000046	Mars	100	92.418	Peromyscus_maniculatus_bairdii
ENSMUSG00000040354	Mars	100	81.360	ENSPCIG00000023765	MARS	100	81.031	Phascolarctos_cinereus
ENSMUSG00000040354	Mars	99	62.295	ENSPFOG00000006998	mars	100	62.404	Poecilia_formosa
ENSMUSG00000040354	Mars	99	62.077	ENSPLAG00000017870	mars	100	62.295	Poecilia_latipinna
ENSMUSG00000040354	Mars	99	62.186	ENSPMEG00000008197	mars	100	62.295	Poecilia_mexicana
ENSMUSG00000040354	Mars	99	62.295	ENSPREG00000008123	mars	100	62.295	Poecilia_reticulata
ENSMUSG00000040354	Mars	100	89.468	ENSPPYG00000004691	MARS	100	89.468	Pongo_abelii
ENSMUSG00000040354	Mars	89	87.179	ENSPCAG00000016037	MARS	93	87.179	Procavia_capensis
ENSMUSG00000040354	Mars	100	89.800	ENSPCOG00000017598	MARS	100	89.800	Propithecus_coquereli
ENSMUSG00000040354	Mars	82	83.409	ENSPVAG00000012112	MARS	82	83.409	Pteropus_vampyrus
ENSMUSG00000040354	Mars	99	62.690	ENSPNYG00000013809	mars	100	62.581	Pundamilia_nyererei
ENSMUSG00000040354	Mars	99	63.351	ENSPNAG00000017290	mars	100	63.420	Pygocentrus_nattereri
ENSMUSG00000040354	Mars	100	95.233	ENSRNOG00000025459	Mars	100	95.233	Rattus_norvegicus
ENSMUSG00000040354	Mars	99	87.528	ENSRBIG00000044782	MARS	99	87.528	Rhinopithecus_bieti
ENSMUSG00000040354	Mars	100	89.183	ENSRROG00000042331	MARS	100	89.183	Rhinopithecus_roxellana
ENSMUSG00000040354	Mars	63	51.220	YGR264C	MES1	76	51.220	Saccharomyces_cerevisiae
ENSMUSG00000040354	Mars	100	86.268	ENSSBOG00000022875	MARS	100	86.268	Saimiri_boliviensis_boliviensis
ENSMUSG00000040354	Mars	100	82.301	ENSSHAG00000007182	MARS	100	82.190	Sarcophilus_harrisii
ENSMUSG00000040354	Mars	99	62.035	ENSSFOG00015011038	mars	99	62.212	Scleropages_formosus
ENSMUSG00000040354	Mars	100	62.554	ENSSMAG00000012409	mars	92	72.179	Scophthalmus_maximus
ENSMUSG00000040354	Mars	100	62.446	ENSSDUG00000019070	mars	100	62.622	Seriola_dumerili
ENSMUSG00000040354	Mars	92	64.167	ENSSLDG00000005561	mars	96	63.886	Seriola_lalandi_dorsalis
ENSMUSG00000040354	Mars	92	88.273	ENSSARG00000002477	MARS	92	88.273	Sorex_araneus
ENSMUSG00000040354	Mars	87	75.676	ENSSPUG00000007756	MARS	99	72.549	Sphenodon_punctatus
ENSMUSG00000040354	Mars	99	62.919	ENSSPAG00000022691	mars	100	63.341	Stegastes_partitus
ENSMUSG00000040354	Mars	100	89.357	ENSSSCG00000023318	MARS	95	89.357	Sus_scrofa
ENSMUSG00000040354	Mars	99	61.790	ENSTRUG00000014774	mars	100	61.790	Takifugu_rubripes
ENSMUSG00000040354	Mars	99	60.453	ENSTNIG00000007060	mars	100	60.560	Tetraodon_nigroviridis
ENSMUSG00000040354	Mars	75	83.529	ENSTBEG00000000303	MARS	87	84.146	Tupaia_belangeri
ENSMUSG00000040354	Mars	79	91.667	ENSTTRG00000013088	MARS	74	89.836	Tursiops_truncatus
ENSMUSG00000040354	Mars	51	89.201	ENSUAMG00000019284	-	94	89.201	Ursus_americanus
ENSMUSG00000040354	Mars	100	89.579	ENSUMAG00000019826	MARS	100	89.579	Ursus_maritimus
ENSMUSG00000040354	Mars	64	94.771	ENSVPAG00000008665	MARS	66	94.771	Vicugna_pacos
ENSMUSG00000040354	Mars	100	89.357	ENSVVUG00000017940	MARS	100	89.357	Vulpes_vulpes
ENSMUSG00000040354	Mars	68	74.716	ENSXETG00000025174	mars	100	74.797	Xenopus_tropicalis
ENSMUSG00000040354	Mars	99	62.186	ENSXCOG00000013878	mars	100	62.404	Xiphophorus_couchianus
ENSMUSG00000040354	Mars	99	62.404	ENSXMAG00000017920	mars	100	62.623	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	-	IEA	Function
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0004812	aminoacyl-tRNA ligase activity	-	IEA	Function
GO:0004825	methionine-tRNA ligase activity	12060739.	IMP	Function
GO:0004825	methionine-tRNA ligase activity	-	ISO	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006412	translation	-	IEA	Process
GO:0006418	tRNA aminoacylation for protein translation	-	IEA	Process
GO:0006431	methionyl-tRNA aminoacylation	12060739.	IDA	Process
GO:0006431	methionyl-tRNA aminoacylation	-	ISO	Process
GO:0009267	cellular response to starvation	-	ISO	Process
GO:0009303	rRNA transcription	-	ISO	Process
GO:0016874	ligase activity	-	IEA	Function
GO:0017101	aminoacyl-tRNA synthetase multienzyme complex	12060739.	IDA	Component
GO:0017101	aminoacyl-tRNA synthetase multienzyme complex	-	ISO	Component
GO:0032869	cellular response to insulin stimulus	-	ISO	Process
GO:0036120	cellular response to platelet-derived growth factor stimulus	-	ISO	Process
GO:0071364	cellular response to epidermal growth factor stimulus	-	ISO	Process
GO:1901838	positive regulation of transcription of nucleolar large rRNA by RNA polymerase I	-	ISO	Process