EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000040359 (Gene tree)
Gene ID: 67490
Gene Symbol: Ufl1
Alias: 1810074P20Rik|Maxer|Rcad
Full Name: UFM1 specific ligase 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 33222
Position: chr4: 25248600-25281821
Accession: 1914740
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000102994	-	4316	XM_006538203	ENSMUSP00000100059	793 (aa)	XP_006538266	Q8CCJ3
ENSMUST00000142949	-	5189	-	-	- (aa)	-	-
ENSMUST00000132558	-	628	-	-	- (aa)	-	-
ENSMUST00000038705	-	2687	XM_006538204	ENSMUSP00000042118	713 (aa)	XP_006538267	Q8CCJ3

Gene Model

Click here to download ENSMUSG00000040359's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000040359's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000040359	Ufl1	100	90.554	ENSG00000014123	UFL1	100	90.554	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005515	protein binding	21494687.	IPI	Function
GO:0005737	cytoplasm	20531390.	IDA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005783	endoplasmic reticulum	20531390.	ISO	Component
GO:0005789	endoplasmic reticulum membrane	20531390.	ISO	Component
GO:0008284	positive regulation of cell proliferation	20531390.	ISO	Process
GO:0010468	regulation of gene expression	20531390.	IMP	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0031397	negative regulation of protein ubiquitination	-	ISO	Process
GO:0032088	negative regulation of NF-kappaB transcription factor activity	-	ISO	Process
GO:0032092	positive regulation of protein binding	21494687.	TAS	Process
GO:0032434	regulation of proteasomal ubiquitin-dependent protein catabolic process	-	ISO	Process
GO:0032880	regulation of protein localization	20531390.	ISO	Process
GO:0032991	protein-containing complex	20531390.	ISO	Component
GO:0033146	regulation of intracellular estrogen receptor signaling pathway	-	ISO	Process
GO:0034976	response to endoplasmic reticulum stress	23152784.	ISO	Process
GO:0043005	neuron projection	20531390.	IDA	Component
GO:0043066	negative regulation of apoptotic process	-	ISO	Process
GO:0060252	positive regulation of glial cell proliferation	20531390.	IDA	Process
GO:0060252	positive regulation of glial cell proliferation	20531390.	IMP	Process
GO:0071568	UFM1 transferase activity	-	ISO	Function
GO:0071569	protein ufmylation	23152784.	ISO	Process
GO:1902065	response to L-glutamate	20531390.	IMP	Process
GO:1990592	protein K69-linked ufmylation	-	ISO	Process