EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000040383 (Gene tree)
Gene ID: 11834
Gene Symbol: Aqr
Alias: -
Full Name: aquarius
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 85855 bases
Position: chr2:114101170-114187024
Accession: 1276102
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000099602	ResIII	PF04851.15	3.8e-05	1	1
ENSMUSP00000047157	ResIII	PF04851.15	4.1e-05	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000102543	-	4352	-	ENSMUSP00000099602	1400 (aa)	-	A2AQA7
ENSMUST00000140441	-	3175	-	-	- (aa)	-	-
ENSMUST00000125460	-	3344	-	-	- (aa)	-	-
ENSMUST00000129504	-	914	-	-	- (aa)	-	-
ENSMUST00000154317	-	504	-	-	- (aa)	-	-
ENSMUST00000043160	-	4888	-	ENSMUSP00000047157	1481 (aa)	-	Q8CFQ3
ENSMUST00000126701	-	772	-	-	- (aa)	-	-
ENSMUST00000131785	-	3112	-	-	- (aa)	-	-
ENSMUST00000147191	-	504	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000040383's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000040383's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000040383	Aqr	100	94.627	ENSG00000021776	AQR	100	94.627	Homo_sapiens
ENSMUSG00000040383	Aqr	95	83.308	ENSAPOG00000011277	aqr	98	81.798	Acanthochromis_polyacanthus
ENSMUSG00000040383	Aqr	98	96.288	ENSAMEG00000005194	AQR	100	93.796	Ailuropoda_melanoleuca
ENSMUSG00000040383	Aqr	94	80.924	ENSACIG00000015226	aqr	98	80.909	Amphilophus_citrinellus
ENSMUSG00000040383	Aqr	95	83.234	ENSAOCG00000018671	aqr	98	81.190	Amphiprion_ocellaris
ENSMUSG00000040383	Aqr	95	83.234	ENSAPEG00000015999	aqr	97	79.256	Amphiprion_percula
ENSMUSG00000040383	Aqr	95	82.498	ENSATEG00000010820	aqr	94	80.846	Anabas_testudineus
ENSMUSG00000040383	Aqr	95	89.315	ENSAPLG00000008144	AQR	100	89.422	Anas_platyrhynchos
ENSMUSG00000040383	Aqr	96	89.376	ENSACAG00000000687	AQR	93	88.913	Anolis_carolinensis
ENSMUSG00000040383	Aqr	98	95.259	ENSANAG00000035427	AQR	97	96.516	Aotus_nancymaae
ENSMUSG00000040383	Aqr	95	82.036	ENSACLG00000012554	aqr	93	80.488	Astatotilapia_calliptera
ENSMUSG00000040383	Aqr	97	82.418	ENSAMXG00000014751	aqr	100	82.310	Astyanax_mexicanus
ENSMUSG00000040383	Aqr	100	94.019	ENSBTAG00000012712	AQR	100	94.019	Bos_taurus
ENSMUSG00000040383	Aqr	98	96.061	ENSCJAG00000021021	AQR	100	93.917	Callithrix_jacchus
ENSMUSG00000040383	Aqr	100	93.217	ENSCAFG00020006355	AQR	98	96.437	Canis_lupus_dingo
ENSMUSG00000040383	Aqr	100	93.590	ENSCHIG00000025362	AQR	100	93.590	Capra_hircus
ENSMUSG00000040383	Aqr	100	93.583	ENSTSYG00000004244	AQR	97	96.664	Carlito_syrichta
ENSMUSG00000040383	Aqr	69	93.930	ENSCAPG00000016131	AQR	99	93.930	Cavia_aperea
ENSMUSG00000040383	Aqr	100	90.781	ENSCCAG00000018954	AQR	98	93.699	Cebus_capucinus
ENSMUSG00000040383	Aqr	100	93.271	ENSCATG00000040332	AQR	100	93.271	Cercocebus_atys
ENSMUSG00000040383	Aqr	93	96.888	ENSCLAG00000007219	AQR	100	96.888	Chinchilla_lanigera
ENSMUSG00000040383	Aqr	97	97.339	ENSCSAG00000007154	AQR	100	94.184	Chlorocebus_sabaeus
ENSMUSG00000040383	Aqr	96	90.639	ENSCPBG00000023856	AQR	95	90.499	Chrysemys_picta_bellii
ENSMUSG00000040383	Aqr	96	62.277	ENSCING00000003235	-	99	61.522	Ciona_intestinalis
ENSMUSG00000040383	Aqr	96	60.328	ENSCSAVG00000009111	-	99	59.780	Ciona_savignyi
ENSMUSG00000040383	Aqr	100	92.545	ENSCANG00000042952	AQR	100	92.881	Colobus_angolensis_palliatus
ENSMUSG00000040383	Aqr	99	96.974	ENSCGRG00001020556	Aqr	99	96.974	Cricetulus_griseus_chok1gshd
ENSMUSG00000040383	Aqr	99	96.974	ENSCGRG00000007912	Aqr	99	96.974	Cricetulus_griseus_crigri
ENSMUSG00000040383	Aqr	98	77.118	ENSCSEG00000004847	aqr	99	77.263	Cynoglossus_semilaevis
ENSMUSG00000040383	Aqr	95	82.635	ENSCVAG00000003393	aqr	96	81.352	Cyprinodon_variegatus
ENSMUSG00000040383	Aqr	97	80.590	ENSDARG00000016775	aqr	91	79.194	Danio_rerio
ENSMUSG00000040383	Aqr	98	91.667	ENSDNOG00000013414	AQR	99	96.882	Dasypus_novemcinctus
ENSMUSG00000040383	Aqr	96	94.056	ENSDORG00000015152	Aqr	99	90.952	Dipodomys_ordii
ENSMUSG00000040383	Aqr	97	64.967	FBgn0051368	CG31368	92	65.116	Drosophila_melanogaster
ENSMUSG00000040383	Aqr	83	87.805	ENSEBUG00000015201	aqr	89	76.554	Eptatretus_burgeri
ENSMUSG00000040383	Aqr	98	96.134	ENSEASG00005016758	AQR	100	93.783	Equus_asinus_asinus
ENSMUSG00000040383	Aqr	97	97.191	ENSECAG00000016399	AQR	100	97.768	Equus_caballus
ENSMUSG00000040383	Aqr	92	100.000	ENSEEUG00000003975	AQR	84	100.000	Erinaceus_europaeus
ENSMUSG00000040383	Aqr	96	82.204	ENSELUG00000001544	aqr	94	81.614	Esox_lucius
ENSMUSG00000040383	Aqr	98	96.207	ENSFCAG00000014069	AQR	100	93.754	Felis_catus
ENSMUSG00000040383	Aqr	92	89.915	ENSFALG00000005683	AQR	95	89.557	Ficedula_albicollis
ENSMUSG00000040383	Aqr	97	97.118	ENSFDAG00000000252	AQR	100	93.960	Fukomys_damarensis
ENSMUSG00000040383	Aqr	99	78.332	ENSFHEG00000020202	aqr	99	78.317	Fundulus_heteroclitus
ENSMUSG00000040383	Aqr	96	81.399	ENSGMOG00000009823	aqr	94	79.671	Gadus_morhua
ENSMUSG00000040383	Aqr	96	90.045	ENSGALG00000009838	AQR	92	89.492	Gallus_gallus
ENSMUSG00000040383	Aqr	96	82.103	ENSGAFG00000019657	aqr	98	77.288	Gambusia_affinis
ENSMUSG00000040383	Aqr	95	81.873	ENSGACG00000010437	aqr	100	80.396	Gasterosteus_aculeatus
ENSMUSG00000040383	Aqr	96	90.430	ENSGAGG00000019581	AQR	95	90.100	Gopherus_agassizii
ENSMUSG00000040383	Aqr	100	93.351	ENSGGOG00000014073	AQR	100	93.351	Gorilla_gorilla
ENSMUSG00000040383	Aqr	95	82.111	ENSHBUG00000017573	aqr	94	80.789	Haplochromis_burtoni
ENSMUSG00000040383	Aqr	99	94.874	ENSHGLG00000013912	AQR	98	95.994	Heterocephalus_glaber_female
ENSMUSG00000040383	Aqr	96	97.253	ENSHGLG00100005299	AQR	98	95.994	Heterocephalus_glaber_male
ENSMUSG00000040383	Aqr	99	79.585	ENSHCOG00000001340	aqr	99	79.656	Hippocampus_comes
ENSMUSG00000040383	Aqr	97	81.319	ENSIPUG00000006431	aqr	92	82.304	Ictalurus_punctatus
ENSMUSG00000040383	Aqr	98	96.134	ENSSTOG00000024444	AQR	98	96.516	Ictidomys_tridecemlineatus
ENSMUSG00000040383	Aqr	98	95.157	ENSJJAG00000018777	Aqr	100	94.467	Jaculus_jaculus
ENSMUSG00000040383	Aqr	95	82.036	ENSKMAG00000011179	aqr	97	78.077	Kryptolebias_marmoratus
ENSMUSG00000040383	Aqr	95	82.684	ENSLBEG00000028346	aqr	97	83.124	Labrus_bergylta
ENSMUSG00000040383	Aqr	96	86.192	ENSLACG00000012039	AQR	95	85.387	Latimeria_chalumnae
ENSMUSG00000040383	Aqr	96	84.370	ENSLOCG00000012184	aqr	95	83.954	Lepisosteus_oculatus
ENSMUSG00000040383	Aqr	97	96.976	ENSLAFG00000017667	AQR	100	94.039	Loxodonta_africana
ENSMUSG00000040383	Aqr	98	95.405	ENSMFAG00000030453	AQR	100	93.382	Macaca_fascicularis
ENSMUSG00000040383	Aqr	98	96.207	ENSMMUG00000002337	AQR	100	94.062	Macaca_mulatta
ENSMUSG00000040383	Aqr	97	94.391	ENSMNEG00000031809	AQR	100	93.859	Macaca_nemestrina
ENSMUSG00000040383	Aqr	98	95.405	ENSMLEG00000043611	AQR	100	93.382	Mandrillus_leucophaeus
ENSMUSG00000040383	Aqr	95	82.934	ENSMAMG00000005722	aqr	96	82.023	Mastacembelus_armatus
ENSMUSG00000040383	Aqr	95	82.036	ENSMZEG00005002419	aqr	97	77.908	Maylandia_zebra
ENSMUSG00000040383	Aqr	96	87.731	ENSMGAG00000012303	AQR	98	87.152	Meleagris_gallopavo
ENSMUSG00000040383	Aqr	91	97.177	ENSMAUG00000021062	Aqr	100	97.177	Mesocricetus_auratus
ENSMUSG00000040383	Aqr	98	96.134	ENSMICG00000016979	AQR	100	93.992	Microcebus_murinus
ENSMUSG00000040383	Aqr	100	95.497	ENSMOCG00000001431	Aqr	100	95.497	Microtus_ochrogaster
ENSMUSG00000040383	Aqr	93	79.503	ENSMMOG00000009958	aqr	98	75.429	Mola_mola
ENSMUSG00000040383	Aqr	97	91.131	ENSMODG00000001369	AQR	94	90.896	Monodelphis_domestica
ENSMUSG00000040383	Aqr	94	78.469	ENSMALG00000016665	aqr	96	78.300	Monopterus_albus
ENSMUSG00000040383	Aqr	100	98.522	MGP_CAROLIEiJ_G0024103	Aqr	100	98.522	Mus_caroli
ENSMUSG00000040383	Aqr	100	98.589	MGP_PahariEiJ_G0025546	Aqr	100	98.589	Mus_pahari
ENSMUSG00000040383	Aqr	100	99.460	MGP_SPRETEiJ_G0025019	Aqr	100	99.460	Mus_spretus
ENSMUSG00000040383	Aqr	98	96.353	ENSMPUG00000008166	AQR	100	94.051	Mustela_putorius_furo
ENSMUSG00000040383	Aqr	98	96.061	ENSMLUG00000006223	AQR	99	93.700	Myotis_lucifugus
ENSMUSG00000040383	Aqr	100	94.340	ENSNGAG00000017515	Aqr	100	94.340	Nannospalax_galili
ENSMUSG00000040383	Aqr	96	80.624	ENSNBRG00000023535	aqr	98	80.609	Neolamprologus_brichardi
ENSMUSG00000040383	Aqr	100	94.426	ENSNLEG00000011180	AQR	100	94.426	Nomascus_leucogenys
ENSMUSG00000040383	Aqr	75	94.839	ENSMEUG00000011715	AQR	80	94.839	Notamacropus_eugenii
ENSMUSG00000040383	Aqr	83	95.408	ENSOPRG00000016495	AQR	83	95.408	Ochotona_princeps
ENSMUSG00000040383	Aqr	95	82.076	ENSONIG00000001395	aqr	97	77.938	Oreochromis_niloticus
ENSMUSG00000040383	Aqr	97	97.339	ENSOCUG00000003488	AQR	100	93.917	Oryctolagus_cuniculus
ENSMUSG00000040383	Aqr	96	80.369	ENSORLG00000013184	aqr	99	80.861	Oryzias_latipes
ENSMUSG00000040383	Aqr	96	80.369	ENSORLG00020017700	aqr	95	80.560	Oryzias_latipes_hni
ENSMUSG00000040383	Aqr	96	81.315	ENSORLG00015000439	aqr	99	78.756	Oryzias_latipes_hsok
ENSMUSG00000040383	Aqr	95	81.886	ENSOMEG00000014207	aqr	99	79.942	Oryzias_melastigma
ENSMUSG00000040383	Aqr	100	90.027	ENSOGAG00000016007	AQR	100	90.027	Otolemur_garnettii
ENSMUSG00000040383	Aqr	98	95.988	ENSOARG00000020005	AQR	100	93.952	Ovis_aries
ENSMUSG00000040383	Aqr	100	94.560	ENSPPAG00000030601	AQR	100	94.560	Pan_paniscus
ENSMUSG00000040383	Aqr	96	97.476	ENSPPRG00000008641	AQR	100	93.821	Panthera_pardus
ENSMUSG00000040383	Aqr	96	97.550	ENSPTIG00000018387	AQR	100	93.889	Panthera_tigris_altaica
ENSMUSG00000040383	Aqr	100	94.694	ENSPTRG00000006891	AQR	99	96.664	Pan_troglodytes
ENSMUSG00000040383	Aqr	97	97.191	ENSPANG00000019671	AQR	100	94.051	Papio_anubis
ENSMUSG00000040383	Aqr	94	78.300	ENSPKIG00000003825	aqr	99	78.376	Paramormyrops_kingsleyae
ENSMUSG00000040383	Aqr	97	89.793	ENSPSIG00000007656	AQR	94	89.527	Pelodiscus_sinensis
ENSMUSG00000040383	Aqr	95	80.583	ENSPMGG00000000136	aqr	96	78.716	Periophthalmus_magnuspinnatus
ENSMUSG00000040383	Aqr	100	92.505	ENSPEMG00000016395	Aqr	100	92.505	Peromyscus_maniculatus_bairdii
ENSMUSG00000040383	Aqr	97	91.131	ENSPCIG00000021761	AQR	95	87.390	Phascolarctos_cinereus
ENSMUSG00000040383	Aqr	95	82.560	ENSPFOG00000015147	aqr	97	78.453	Poecilia_formosa
ENSMUSG00000040383	Aqr	98	79.956	ENSPLAG00000021235	aqr	97	82.635	Poecilia_latipinna
ENSMUSG00000040383	Aqr	95	82.485	ENSPMEG00000004188	aqr	97	81.950	Poecilia_mexicana
ENSMUSG00000040383	Aqr	92	82.002	ENSPREG00000007197	aqr	97	81.988	Poecilia_reticulata
ENSMUSG00000040383	Aqr	98	95.766	ENSPPYG00000006319	AQR	100	94.220	Pongo_abelii
ENSMUSG00000040383	Aqr	100	83.778	ENSPCOG00000021390	AQR	98	83.784	Propithecus_coquereli
ENSMUSG00000040383	Aqr	95	82.186	ENSPNYG00000016598	aqr	99	80.743	Pundamilia_nyererei
ENSMUSG00000040383	Aqr	92	81.783	ENSPNAG00000001173	aqr	97	81.705	Pygocentrus_nattereri
ENSMUSG00000040383	Aqr	100	97.782	ENSRNOG00000008912	Aqr	100	97.782	Rattus_norvegicus
ENSMUSG00000040383	Aqr	100	92.468	ENSRBIG00000038017	AQR	98	95.185	Rhinopithecus_bieti
ENSMUSG00000040383	Aqr	98	96.207	ENSRROG00000044173	AQR	100	94.118	Rhinopithecus_roxellana
ENSMUSG00000040383	Aqr	97	97.265	ENSSBOG00000000986	AQR	100	94.118	Saimiri_boliviensis_boliviensis
ENSMUSG00000040383	Aqr	97	90.916	ENSSHAG00000016987	AQR	99	87.576	Sarcophilus_harrisii
ENSMUSG00000040383	Aqr	95	84.258	ENSSFOG00015010484	aqr	98	82.798	Scleropages_formosus
ENSMUSG00000040383	Aqr	95	82.410	ENSSMAG00000018736	aqr	97	78.162	Scophthalmus_maximus
ENSMUSG00000040383	Aqr	97	82.098	ENSSDUG00000015005	aqr	96	83.308	Seriola_dumerili
ENSMUSG00000040383	Aqr	94	83.245	ENSSLDG00000021156	aqr	97	83.232	Seriola_lalandi_dorsalis
ENSMUSG00000040383	Aqr	95	83.308	ENSSPAG00000015693	aqr	95	82.929	Stegastes_partitus
ENSMUSG00000040383	Aqr	98	96.280	ENSSSCG00000004802	AQR	100	93.984	Sus_scrofa
ENSMUSG00000040383	Aqr	96	89.251	ENSTGUG00000011770	AQR	98	88.841	Taeniopygia_guttata
ENSMUSG00000040383	Aqr	97	80.645	ENSTRUG00000014255	aqr	94	80.360	Takifugu_rubripes
ENSMUSG00000040383	Aqr	97	80.572	ENSTNIG00000017238	aqr	99	76.142	Tetraodon_nigroviridis
ENSMUSG00000040383	Aqr	100	93.083	ENSTTRG00000014800	AQR	100	93.083	Tursiops_truncatus
ENSMUSG00000040383	Aqr	100	94.066	ENSUAMG00000015052	AQR	100	94.066	Ursus_americanus
ENSMUSG00000040383	Aqr	97	97.487	ENSUMAG00000015725	AQR	100	93.984	Ursus_maritimus
ENSMUSG00000040383	Aqr	98	95.405	ENSVPAG00000010622	AQR	99	93.611	Vicugna_pacos
ENSMUSG00000040383	Aqr	100	94.157	ENSVVUG00000026312	AQR	100	94.090	Vulpes_vulpes
ENSMUSG00000040383	Aqr	93	85.507	ENSXETG00000012901	aqr	90	84.959	Xenopus_tropicalis
ENSMUSG00000040383	Aqr	96	81.954	ENSXMAG00000009596	aqr	97	78.177	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000398	mRNA splicing, via spliceosome	-	ISO	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005681	spliceosomal complex	21873635.	IBA	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0071007	U2-type catalytic step 2 spliceosome	-	ISO	Component
GO:0071013	catalytic step 2 spliceosome	21873635.	IBA	Component
GO:0071013	catalytic step 2 spliceosome	-	ISO	Component