EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000040482 (Gene tree)
Gene ID: 112403
Gene Symbol: Dxo
Alias: Dom3z
Full Name: decapping exoribonuclease
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 2215 bases
Position: chr17:34837019-34839233
Accession: 1890444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000133376	RAI1	PF08652.11	1e-22	1	1
ENSMUSP00000134332	RAI1	PF08652.11	1e-21	1	1
ENSMUSP00000047018	RAI1	PF08652.11	1.4e-21	1	1
ENSMUSP00000137234	RAI1	PF08652.11	1.4e-21	1	1
ENSMUSP00000133587	RAI1	PF08652.11	1.7e-11	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000173995	-	584	-	ENSMUSP00000134583	144 (aa)	-	G3UZP8
ENSMUST00000046244	-	1519	-	ENSMUSP00000047018	397 (aa)	-	A0A0R4J288
ENSMUST00000174684	-	427	-	ENSMUSP00000134653	61 (aa)	-	G3UZV8
ENSMUST00000173768	-	497	-	-	- (aa)	-	-
ENSMUST00000173874	-	1117	XM_011246251	ENSMUSP00000134332	304 (aa)	XP_011244553	G3UZ39
ENSMUST00000180043	-	1447	XM_017317211	ENSMUSP00000137234	397 (aa)	XP_017172700	A0A0R4J288
ENSMUST00000174092	-	738	-	ENSMUSP00000133587	245 (aa)	-	G3UX82
ENSMUST00000173063	-	701	-	ENSMUSP00000134164	45 (aa)	-	G3UYP2
ENSMUST00000173644	-	956	-	-	- (aa)	-	-
ENSMUST00000174569	-	480	-	ENSMUSP00000133448	74 (aa)	-	G3UWW3
ENSMUST00000172612	-	583	-	ENSMUSP00000133376	118 (aa)	-	G3UWP7

Gene Model

Click here to download ENSMUSG00000040482's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000040482's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000040482	Dxo	100	91.525	ENSG00000204348	DXO	100	89.899	Homo_sapiens
ENSMUSG00000040482	Dxo	99	55.556	ENSAPOG00000017890	DXO	84	54.848	Acanthochromis_polyacanthus
ENSMUSG00000040482	Dxo	100	88.983	ENSAMEG00000002151	DXO	100	85.139	Ailuropoda_melanoleuca
ENSMUSG00000040482	Dxo	99	55.556	ENSAOCG00000001719	DXO	84	54.571	Amphiprion_ocellaris
ENSMUSG00000040482	Dxo	99	55.556	ENSAPEG00000012237	DXO	84	55.125	Amphiprion_percula
ENSMUSG00000040482	Dxo	99	52.991	ENSATEG00000024423	DXO	83	53.039	Anabas_testudineus
ENSMUSG00000040482	Dxo	100	61.864	ENSACAG00000012071	DXO	91	63.298	Anolis_carolinensis
ENSMUSG00000040482	Dxo	100	93.220	ENSANAG00000020757	DXO	92	90.152	Aotus_nancymaae
ENSMUSG00000040482	Dxo	100	55.085	ENSACLG00000027873	DXO	87	53.476	Astatotilapia_calliptera
ENSMUSG00000040482	Dxo	100	55.932	ENSAMXG00000032987	DXO	90	55.026	Astyanax_mexicanus
ENSMUSG00000040482	Dxo	100	92.373	ENSBTAG00000005588	DXO	100	86.181	Bos_taurus
ENSMUSG00000040482	Dxo	97	32.759	WBGene00001050	dom-3	63	32.714	Caenorhabditis_elegans
ENSMUSG00000040482	Dxo	100	92.373	ENSCJAG00000002246	DXO	100	90.404	Callithrix_jacchus
ENSMUSG00000040482	Dxo	100	88.983	ENSCAFG00000000694	DXO	99	85.870	Canis_familiaris
ENSMUSG00000040482	Dxo	100	88.983	ENSCAFG00020000953	DXO	100	85.894	Canis_lupus_dingo
ENSMUSG00000040482	Dxo	100	89.831	ENSCHIG00000024555	DXO	99	88.114	Capra_hircus
ENSMUSG00000040482	Dxo	100	90.678	ENSTSYG00000037337	DXO	100	87.374	Carlito_syrichta
ENSMUSG00000040482	Dxo	100	94.068	ENSCAPG00000008333	-	100	94.068	Cavia_aperea
ENSMUSG00000040482	Dxo	100	94.068	ENSCPOG00000015108	DXO	100	92.063	Cavia_porcellus
ENSMUSG00000040482	Dxo	100	93.220	ENSCCAG00000036575	DXO	100	91.162	Cebus_capucinus
ENSMUSG00000040482	Dxo	100	90.678	ENSCATG00000001700	DXO	100	89.394	Cercocebus_atys
ENSMUSG00000040482	Dxo	100	90.678	ENSCLAG00000006682	DXO	100	91.270	Chinchilla_lanigera
ENSMUSG00000040482	Dxo	100	90.678	ENSCSAG00000009007	DXO	100	89.394	Chlorocebus_sabaeus
ENSMUSG00000040482	Dxo	100	61.017	ENSCPBG00000001233	DXO	92	64.641	Chrysemys_picta_bellii
ENSMUSG00000040482	Dxo	92	42.202	ENSCING00000000512	-	99	39.617	Ciona_intestinalis
ENSMUSG00000040482	Dxo	92	42.202	ENSCSAVG00000009527	-	99	38.398	Ciona_savignyi
ENSMUSG00000040482	Dxo	100	89.831	ENSCANG00000039839	DXO	100	89.141	Colobus_angolensis_palliatus
ENSMUSG00000040482	Dxo	100	96.032	ENSCGRG00001001718	Dxo	100	96.032	Cricetulus_griseus_chok1gshd
ENSMUSG00000040482	Dxo	99	57.265	ENSCSEG00000014295	DXO	92	51.151	Cynoglossus_semilaevis
ENSMUSG00000040482	Dxo	100	55.833	ENSCVAG00000019072	DXO	85	57.263	Cyprinodon_variegatus
ENSMUSG00000040482	Dxo	100	89.831	ENSDNOG00000038155	DXO	100	87.406	Dasypus_novemcinctus
ENSMUSG00000040482	Dxo	100	89.831	ENSDORG00000011708	Dxo	100	86.432	Dipodomys_ordii
ENSMUSG00000040482	Dxo	99	83.756	ENSETEG00000009525	DXO	100	83.756	Echinops_telfairi
ENSMUSG00000040482	Dxo	100	50.847	ENSEBUG00000003794	DXO	83	52.473	Eptatretus_burgeri
ENSMUSG00000040482	Dxo	100	93.220	ENSEASG00005015528	DXO	100	92.063	Equus_asinus_asinus
ENSMUSG00000040482	Dxo	100	93.220	ENSECAG00000019694	DXO	100	92.063	Equus_caballus
ENSMUSG00000040482	Dxo	100	83.898	ENSEEUG00000005411	DXO	100	84.422	Erinaceus_europaeus
ENSMUSG00000040482	Dxo	100	53.390	ENSELUG00000005464	DXO	82	54.144	Esox_lucius
ENSMUSG00000040482	Dxo	100	90.678	ENSFCAG00000004520	DXO	100	86.902	Felis_catus
ENSMUSG00000040482	Dxo	100	93.220	ENSFDAG00000004264	DXO	98	94.828	Fukomys_damarensis
ENSMUSG00000040482	Dxo	99	53.846	ENSFHEG00000014408	DXO	86	55.738	Fundulus_heteroclitus
ENSMUSG00000040482	Dxo	100	51.695	ENSGMOG00000008886	DXO	89	53.151	Gadus_morhua
ENSMUSG00000040482	Dxo	99	55.556	ENSGAFG00000020264	DXO	87	54.717	Gambusia_affinis
ENSMUSG00000040482	Dxo	99	53.846	ENSGACG00000011578	DXO	97	52.713	Gasterosteus_aculeatus
ENSMUSG00000040482	Dxo	100	91.525	ENSGGOG00000002277	DXO	100	90.152	Gorilla_gorilla
ENSMUSG00000040482	Dxo	100	55.085	ENSHBUG00000012997	DXO	87	53.743	Haplochromis_burtoni
ENSMUSG00000040482	Dxo	100	89.683	ENSHGLG00000016585	DOM3Z	100	87.657	Heterocephalus_glaber_female
ENSMUSG00000040482	Dxo	100	89.683	ENSHGLG00000016572	DOM3Z	100	89.683	Heterocephalus_glaber_female
ENSMUSG00000040482	Dxo	100	89.683	ENSHGLG00100013105	DXO	100	89.683	Heterocephalus_glaber_male
ENSMUSG00000040482	Dxo	99	55.556	ENSHCOG00000018381	DXO	99	49.441	Hippocampus_comes
ENSMUSG00000040482	Dxo	100	55.085	ENSHCOG00000018279	DXO	88	54.223	Hippocampus_comes
ENSMUSG00000040482	Dxo	99	51.282	ENSHCOG00000013410	-	88	45.614	Hippocampus_comes
ENSMUSG00000040482	Dxo	99	51.282	ENSHCOG00000018327	DXO	88	47.339	Hippocampus_comes
ENSMUSG00000040482	Dxo	100	55.085	ENSIPUG00000002976	dxo	88	54.918	Ictalurus_punctatus
ENSMUSG00000040482	Dxo	100	92.373	ENSSTOG00000027075	DXO	100	90.476	Ictidomys_tridecemlineatus
ENSMUSG00000040482	Dxo	100	90.476	ENSJJAG00000016118	Dxo	100	86.902	Jaculus_jaculus
ENSMUSG00000040482	Dxo	98	54.310	ENSKMAG00000018985	DXO	88	54.155	Kryptolebias_marmoratus
ENSMUSG00000040482	Dxo	99	54.701	ENSLBEG00000025439	DXO	86	53.406	Labrus_bergylta
ENSMUSG00000040482	Dxo	100	55.932	ENSLACG00000011329	DXO	100	55.372	Latimeria_chalumnae
ENSMUSG00000040482	Dxo	100	53.782	ENSLOCG00000008086	DXO	90	54.337	Lepisosteus_oculatus
ENSMUSG00000040482	Dxo	100	93.220	ENSLAFG00000014243	DXO	100	89.169	Loxodonta_africana
ENSMUSG00000040482	Dxo	100	90.678	ENSMFAG00000042173	DXO	100	89.394	Macaca_fascicularis
ENSMUSG00000040482	Dxo	100	90.678	ENSMMUG00000000741	DXO	100	89.646	Macaca_mulatta
ENSMUSG00000040482	Dxo	100	90.678	ENSMNEG00000032201	DXO	100	89.141	Macaca_nemestrina
ENSMUSG00000040482	Dxo	100	90.678	ENSMLEG00000035257	DXO	100	89.394	Mandrillus_leucophaeus
ENSMUSG00000040482	Dxo	100	55.085	ENSMZEG00005003714	DXO	87	53.476	Maylandia_zebra
ENSMUSG00000040482	Dxo	100	93.220	ENSMAUG00000022102	Dxo	100	89.950	Mesocricetus_auratus
ENSMUSG00000040482	Dxo	100	90.678	ENSMICG00000016605	DXO	99	89.141	Microcebus_murinus
ENSMUSG00000040482	Dxo	100	96.032	ENSMOCG00000005928	Dxo	100	96.032	Microtus_ochrogaster
ENSMUSG00000040482	Dxo	99	86.325	ENSMODG00000015027	DXO	83	80.508	Monodelphis_domestica
ENSMUSG00000040482	Dxo	100	99.206	MGP_CAROLIEiJ_G0021476	Dxo	100	100.000	Mus_caroli
ENSMUSG00000040482	Dxo	100	99.153	MGP_PahariEiJ_G0020471	Dxo	100	99.153	Mus_pahari
ENSMUSG00000040482	Dxo	100	100.000	MGP_SPRETEiJ_G0022381	Dxo	100	100.000	Mus_spretus
ENSMUSG00000040482	Dxo	100	89.831	ENSMPUG00000010562	DXO	100	83.375	Mustela_putorius_furo
ENSMUSG00000040482	Dxo	100	90.678	ENSMLUG00000027577	DXO	98	87.402	Myotis_lucifugus
ENSMUSG00000040482	Dxo	100	90.678	ENSNGAG00000021244	Dxo	100	88.889	Nannospalax_galili
ENSMUSG00000040482	Dxo	100	55.085	ENSNBRG00000001675	DXO	87	53.743	Neolamprologus_brichardi
ENSMUSG00000040482	Dxo	100	92.373	ENSNLEG00000006470	DXO	100	90.152	Nomascus_leucogenys
ENSMUSG00000040482	Dxo	100	88.983	ENSMEUG00000006110	DXO	99	80.952	Notamacropus_eugenii
ENSMUSG00000040482	Dxo	100	87.288	ENSODEG00000017552	DXO	100	90.476	Octodon_degus
ENSMUSG00000040482	Dxo	100	54.237	ENSONIG00000017143	DXO	95	52.850	Oreochromis_niloticus
ENSMUSG00000040482	Dxo	100	89.831	ENSOCUG00000007029	DXO	100	88.917	Oryctolagus_cuniculus
ENSMUSG00000040482	Dxo	98	52.586	ENSORLG00000008743	DXO	85	55.278	Oryzias_latipes
ENSMUSG00000040482	Dxo	98	52.586	ENSORLG00020018952	DXO	84	54.875	Oryzias_latipes_hni
ENSMUSG00000040482	Dxo	98	51.724	ENSORLG00015008419	DXO	85	54.722	Oryzias_latipes_hsok
ENSMUSG00000040482	Dxo	98	52.586	ENSOMEG00000011105	DXO	85	55.432	Oryzias_melastigma
ENSMUSG00000040482	Dxo	100	93.220	ENSOGAG00000009590	DXO	99	89.646	Otolemur_garnettii
ENSMUSG00000040482	Dxo	98	92.241	ENSOARG00000002332	DXO	84	89.337	Ovis_aries
ENSMUSG00000040482	Dxo	100	91.525	ENSPPAG00000041236	DXO	100	89.899	Pan_paniscus
ENSMUSG00000040482	Dxo	100	90.678	ENSPPRG00000005199	DXO	100	86.650	Panthera_pardus
ENSMUSG00000040482	Dxo	100	90.678	ENSPTIG00000021529	DXO	100	86.398	Panthera_tigris_altaica
ENSMUSG00000040482	Dxo	100	91.525	ENSPTRG00000045498	-	100	89.899	Pan_troglodytes
ENSMUSG00000040482	Dxo	100	91.525	ENSPTRG00000052503	-	100	90.152	Pan_troglodytes
ENSMUSG00000040482	Dxo	100	90.678	ENSPANG00000017587	DXO	100	89.394	Papio_anubis
ENSMUSG00000040482	Dxo	99	50.427	ENSPMGG00000022188	DXO	82	52.542	Periophthalmus_magnuspinnatus
ENSMUSG00000040482	Dxo	100	94.915	ENSPEMG00000009229	Dxo	99	95.238	Peromyscus_maniculatus_bairdii
ENSMUSG00000040482	Dxo	100	55.932	ENSPMAG00000008156	DXO	99	56.338	Petromyzon_marinus
ENSMUSG00000040482	Dxo	100	87.288	ENSPCIG00000018793	DXO	100	80.952	Phascolarctos_cinereus
ENSMUSG00000040482	Dxo	99	53.846	ENSPFOG00000004778	DXO	87	54.447	Poecilia_formosa
ENSMUSG00000040482	Dxo	99	53.846	ENSPLAG00000015246	DXO	87	54.447	Poecilia_latipinna
ENSMUSG00000040482	Dxo	99	53.846	ENSPMEG00000001371	DXO	87	54.447	Poecilia_mexicana
ENSMUSG00000040482	Dxo	100	91.525	ENSPPYG00000016473	DXO	100	90.152	Pongo_abelii
ENSMUSG00000040482	Dxo	100	89.831	ENSPCAG00000004354	DXO	99	87.626	Procavia_capensis
ENSMUSG00000040482	Dxo	100	92.373	ENSPCOG00000016641	DXO	99	89.899	Propithecus_coquereli
ENSMUSG00000040482	Dxo	100	89.831	ENSPVAG00000005137	DXO	100	87.406	Pteropus_vampyrus
ENSMUSG00000040482	Dxo	100	54.237	ENSPNYG00000018482	DXO	87	52.941	Pundamilia_nyererei
ENSMUSG00000040482	Dxo	100	55.085	ENSPNAG00000016499	DXO	88	55.014	Pygocentrus_nattereri
ENSMUSG00000040482	Dxo	100	98.305	ENSRNOG00000000422	Dxo	100	96.725	Rattus_norvegicus
ENSMUSG00000040482	Dxo	100	89.803	ENSRBIG00000044693	DXO	100	89.394	Rhinopithecus_bieti
ENSMUSG00000040482	Dxo	100	90.678	ENSRROG00000035555	DXO	100	89.646	Rhinopithecus_roxellana
ENSMUSG00000040482	Dxo	100	93.220	ENSSBOG00000035395	DXO	100	90.657	Saimiri_boliviensis_boliviensis
ENSMUSG00000040482	Dxo	100	85.593	ENSSHAG00000009052	DXO	99	78.734	Sarcophilus_harrisii
ENSMUSG00000040482	Dxo	100	54.237	ENSSFOG00015003736	dxo	89	54.692	Scleropages_formosus
ENSMUSG00000040482	Dxo	100	53.074	ENSSMAG00000015443	DXO	89	52.062	Scophthalmus_maximus
ENSMUSG00000040482	Dxo	99	52.137	ENSSDUG00000009756	DXO	94	52.703	Seriola_dumerili
ENSMUSG00000040482	Dxo	99	52.991	ENSSLDG00000022817	DXO	83	52.778	Seriola_lalandi_dorsalis
ENSMUSG00000040482	Dxo	67	67.647	ENSSPUG00000012861	DXO	76	63.905	Sphenodon_punctatus
ENSMUSG00000040482	Dxo	97	53.913	ENSSPAG00000009427	DXO	87	52.000	Stegastes_partitus
ENSMUSG00000040482	Dxo	100	89.831	ENSSSCG00000001425	DXO	100	88.665	Sus_scrofa
ENSMUSG00000040482	Dxo	99	52.137	ENSTRUG00000021219	DXO	91	51.596	Takifugu_rubripes
ENSMUSG00000040482	Dxo	99	42.373	ENSTNIG00000000151	-	99	49.863	Tetraodon_nigroviridis
ENSMUSG00000040482	Dxo	96	89.381	ENSTTRG00000005937	DXO	100	76.826	Tursiops_truncatus
ENSMUSG00000040482	Dxo	100	84.868	ENSUAMG00000024335	DXO	100	81.108	Ursus_americanus
ENSMUSG00000040482	Dxo	100	88.983	ENSUMAG00000012641	DXO	100	88.889	Ursus_maritimus
ENSMUSG00000040482	Dxo	80	91.525	ENSVPAG00000000292	-	99	92.386	Vicugna_pacos
ENSMUSG00000040482	Dxo	100	89.831	ENSVVUG00000023270	DXO	100	89.683	Vulpes_vulpes
ENSMUSG00000040482	Dxo	100	55.932	ENSXETG00000027585	dxo	99	53.093	Xenopus_tropicalis
ENSMUSG00000040482	Dxo	99	52.991	ENSXMAG00000001092	DXO	87	53.908	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000287	magnesium ion binding	23523372.	IDA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0003729	mRNA binding	23523372.	IDA	Function
GO:0004518	nuclease activity	-	IEA	Function
GO:0004527	exonuclease activity	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0006402	mRNA catabolic process	23523372.	IMP	Process
GO:0008409	5'-3' exonuclease activity	23523372.	IDA	Function
GO:0016787	hydrolase activity	-	IEA	Function
GO:0034353	RNA pyrophosphohydrolase activity	23523372.	IDA	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0050779	RNA destabilization	23523372.	IMP	Process
GO:0071028	nuclear mRNA surveillance	23523372.	IMP	Process
GO:0090305	nucleic acid phosphodiester bond hydrolysis	23523372.	IDA	Process