EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000040521 (Gene tree)
Gene ID: 66399
Gene Symbol: Tsfm
Alias: 2310050B20Rik|9430024O13Rik|EF-TS|EF-Tsmt
Full Name: Ts translation elongation factor%2C mitochondrial
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 19269 bases
Position: chr10:127011572-127030840
Accession: 1913649
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000042134	EF_TS	PF00889.19	1.4e-26	1	1
ENSMUSP00000113446	EF_TS	PF00889.19	2.9e-09	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000120547	-	1271	-	ENSMUSP00000113446	193 (aa)	-	Q9CX33
ENSMUST00000152054	-	655	-	ENSMUSP00000122669	206 (aa)	-	D3Z4M7
ENSMUST00000138556	-	641	-	-	- (aa)	-	-
ENSMUST00000040560	-	1206	-	ENSMUSP00000042134	324 (aa)	-	Q9CZR8
ENSMUST00000145476	-	656	-	-	- (aa)	-	-
ENSMUST00000134917	-	695	-	-	- (aa)	-	-
ENSMUST00000140564	-	833	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000040521's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000040521's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000040521	Tsfm	99	83.333	ENSG00000123297	TSFM	100	92.262	Homo_sapiens
ENSMUSG00000040521	Tsfm	96	54.301	ENSAPOG00000014844	tsfm	97	52.090	Acanthochromis_polyacanthus
ENSMUSG00000040521	Tsfm	99	83.854	ENSAMEG00000005452	TSFM	100	84.308	Ailuropoda_melanoleuca
ENSMUSG00000040521	Tsfm	96	55.376	ENSACIG00000001066	tsfm	98	53.698	Amphilophus_citrinellus
ENSMUSG00000040521	Tsfm	96	52.432	ENSAOCG00000007132	tsfm	97	52.090	Amphiprion_ocellaris
ENSMUSG00000040521	Tsfm	96	53.055	ENSAPEG00000015755	tsfm	97	53.055	Amphiprion_percula
ENSMUSG00000040521	Tsfm	98	52.038	ENSATEG00000001497	tsfm	99	52.038	Anabas_testudineus
ENSMUSG00000040521	Tsfm	87	67.832	ENSACAG00000013044	TSFM	87	67.832	Anolis_carolinensis
ENSMUSG00000040521	Tsfm	99	84.375	ENSANAG00000038019	TSFM	100	86.154	Aotus_nancymaae
ENSMUSG00000040521	Tsfm	96	55.376	ENSACLG00000000139	tsfm	99	52.830	Astatotilapia_calliptera
ENSMUSG00000040521	Tsfm	88	51.916	ENSAMXG00000001713	tsfm	89	51.916	Astyanax_mexicanus
ENSMUSG00000040521	Tsfm	93	86.755	ENSBTAG00000016912	TSFM	88	81.121	Bos_taurus
ENSMUSG00000040521	Tsfm	84	34.000	WBGene00010094	tsfm-1	92	34.000	Caenorhabditis_elegans
ENSMUSG00000040521	Tsfm	96	86.624	ENSCJAG00000006600	TSFM	100	85.890	Callithrix_jacchus
ENSMUSG00000040521	Tsfm	86	85.357	ENSCAFG00000000293	-	91	84.589	Canis_familiaris
ENSMUSG00000040521	Tsfm	86	85.357	ENSCAFG00020022844	TSFM	73	83.278	Canis_lupus_dingo
ENSMUSG00000040521	Tsfm	93	86.424	ENSCHIG00000013850	TSFM	100	83.951	Capra_hircus
ENSMUSG00000040521	Tsfm	73	89.787	ENSTSYG00000028892	TSFM	94	88.980	Carlito_syrichta
ENSMUSG00000040521	Tsfm	60	73.057	ENSCAPG00000007733	-	100	72.683	Cavia_aperea
ENSMUSG00000040521	Tsfm	91	86.532	ENSCPOG00000037732	TSFM	100	84.709	Cavia_porcellus
ENSMUSG00000040521	Tsfm	98	84.817	ENSCCAG00000033254	TSFM	100	85.846	Cebus_capucinus
ENSMUSG00000040521	Tsfm	99	84.375	ENSCATG00000016867	TSFM	100	85.846	Cercocebus_atys
ENSMUSG00000040521	Tsfm	93	77.483	ENSCLAG00000009226	TSFM	100	76.923	Chinchilla_lanigera
ENSMUSG00000040521	Tsfm	99	84.375	ENSCSAG00000004601	TSFM	100	85.846	Chlorocebus_sabaeus
ENSMUSG00000040521	Tsfm	74	86.620	ENSCHOG00000002360	TSFM	81	88.235	Choloepus_hoffmanni
ENSMUSG00000040521	Tsfm	90	71.717	ENSCPBG00000018147	TSFM	88	71.717	Chrysemys_picta_bellii
ENSMUSG00000040521	Tsfm	86	33.766	ENSCING00000001275	-	91	33.766	Ciona_intestinalis
ENSMUSG00000040521	Tsfm	74	33.566	ENSCSAVG00000007722	-	99	31.944	Ciona_savignyi
ENSMUSG00000040521	Tsfm	80	85.271	ENSCANG00000030298	TSFM	92	89.516	Colobus_angolensis_palliatus
ENSMUSG00000040521	Tsfm	99	89.005	ENSCGRG00001023000	TSFM	100	88.344	Cricetulus_griseus_chok1gshd
ENSMUSG00000040521	Tsfm	99	89.005	ENSCGRG00000006566	TSFM	100	88.344	Cricetulus_griseus_crigri
ENSMUSG00000040521	Tsfm	74	54.583	ENSCSEG00000003376	tsfm	82	54.583	Cynoglossus_semilaevis
ENSMUSG00000040521	Tsfm	89	54.167	ENSCVAG00000001340	tsfm	92	54.167	Cyprinodon_variegatus
ENSMUSG00000040521	Tsfm	98	54.497	ENSDARG00000060748	tsfm	98	50.476	Danio_rerio
ENSMUSG00000040521	Tsfm	96	83.387	ENSDNOG00000049415	TSFM	100	82.462	Dasypus_novemcinctus
ENSMUSG00000040521	Tsfm	77	87.097	ENSDORG00000007272	Tsfm	94	87.097	Dipodomys_ordii
ENSMUSG00000040521	Tsfm	85	39.792	FBgn0032646	mEFTs	87	39.792	Drosophila_melanogaster
ENSMUSG00000040521	Tsfm	97	80.635	ENSETEG00000002686	-	100	80.000	Echinops_telfairi
ENSMUSG00000040521	Tsfm	96	79.511	ENSEASG00005007292	TSFM	83	79.351	Equus_asinus_asinus
ENSMUSG00000040521	Tsfm	90	85.567	ENSECAG00000010520	TSFM	83	85.149	Equus_caballus
ENSMUSG00000040521	Tsfm	98	74.074	ENSEEUG00000004147	-	100	74.074	Erinaceus_europaeus
ENSMUSG00000040521	Tsfm	81	57.197	ENSELUG00000015481	tsfm	90	56.491	Esox_lucius
ENSMUSG00000040521	Tsfm	89	87.197	ENSFCAG00000023794	TSFM	100	84.000	Felis_catus
ENSMUSG00000040521	Tsfm	100	82.154	ENSFDAG00000016548	TSFM	100	82.154	Fukomys_damarensis
ENSMUSG00000040521	Tsfm	96	54.301	ENSFHEG00000013458	tsfm	98	53.205	Fundulus_heteroclitus
ENSMUSG00000040521	Tsfm	85	52.190	ENSGMOG00000000868	tsfm	93	52.190	Gadus_morhua
ENSMUSG00000040521	Tsfm	96	53.226	ENSGAFG00000021764	tsfm	98	52.244	Gambusia_affinis
ENSMUSG00000040521	Tsfm	89	51.034	ENSGACG00000000697	tsfm	92	51.971	Gasterosteus_aculeatus
ENSMUSG00000040521	Tsfm	92	71.192	ENSGAGG00000020897	TSFM	89	71.192	Gopherus_agassizii
ENSMUSG00000040521	Tsfm	99	84.375	ENSGGOG00000001415	TSFM	100	86.154	Gorilla_gorilla
ENSMUSG00000040521	Tsfm	96	54.839	ENSHBUG00000021738	tsfm	99	52.516	Haplochromis_burtoni
ENSMUSG00000040521	Tsfm	94	84.967	ENSHGLG00000008559	TSFM	100	83.385	Heterocephalus_glaber_female
ENSMUSG00000040521	Tsfm	94	84.967	ENSHGLG00100005643	TSFM	100	83.385	Heterocephalus_glaber_male
ENSMUSG00000040521	Tsfm	61	64.407	ENSHCOG00000019566	-	78	68.519	Hippocampus_comes
ENSMUSG00000040521	Tsfm	85	54.015	ENSHCOG00000021049	tsfm	88	54.015	Hippocampus_comes
ENSMUSG00000040521	Tsfm	92	41.472	ENSIPUG00000019836	tsfm	86	41.472	Ictalurus_punctatus
ENSMUSG00000040521	Tsfm	94	85.294	ENSSTOG00000001159	TSFM	100	83.692	Ictidomys_tridecemlineatus
ENSMUSG00000040521	Tsfm	99	82.099	ENSJJAG00000012907	Tsfm	99	82.099	Jaculus_jaculus
ENSMUSG00000040521	Tsfm	88	54.895	ENSKMAG00000018906	tsfm	90	54.895	Kryptolebias_marmoratus
ENSMUSG00000040521	Tsfm	96	53.514	ENSLBEG00000019779	tsfm	97	51.768	Labrus_bergylta
ENSMUSG00000040521	Tsfm	99	62.805	ENSLACG00000018125	TSFM	99	62.805	Latimeria_chalumnae
ENSMUSG00000040521	Tsfm	90	43.709	ENSLOCG00000006608	tsfm	91	44.702	Lepisosteus_oculatus
ENSMUSG00000040521	Tsfm	97	84.713	ENSLAFG00000015177	TSFM	100	84.000	Loxodonta_africana
ENSMUSG00000040521	Tsfm	99	84.375	ENSMFAG00000036132	TSFM	100	85.846	Macaca_fascicularis
ENSMUSG00000040521	Tsfm	99	84.375	ENSMMUG00000005893	TSFM	100	85.846	Macaca_mulatta
ENSMUSG00000040521	Tsfm	99	84.375	ENSMNEG00000026351	TSFM	100	85.846	Macaca_nemestrina
ENSMUSG00000040521	Tsfm	99	83.854	ENSMLEG00000029811	TSFM	100	85.538	Mandrillus_leucophaeus
ENSMUSG00000040521	Tsfm	95	57.297	ENSMAMG00000002230	tsfm	97	54.341	Mastacembelus_armatus
ENSMUSG00000040521	Tsfm	96	54.839	ENSMZEG00005008170	tsfm	99	52.516	Maylandia_zebra
ENSMUSG00000040521	Tsfm	100	88.000	ENSMAUG00000011705	Tsfm	100	88.000	Mesocricetus_auratus
ENSMUSG00000040521	Tsfm	99	82.383	ENSMICG00000003812	TSFM	100	83.742	Microcebus_murinus
ENSMUSG00000040521	Tsfm	99	89.529	ENSMOCG00000006104	Tsfm	100	90.432	Microtus_ochrogaster
ENSMUSG00000040521	Tsfm	89	53.633	ENSMMOG00000021854	tsfm	91	53.633	Mola_mola
ENSMUSG00000040521	Tsfm	100	72.923	ENSMODG00000021351	TSFM	95	72.923	Monodelphis_domestica
ENSMUSG00000040521	Tsfm	93	53.488	ENSMALG00000015046	tsfm	94	53.488	Monopterus_albus
ENSMUSG00000040521	Tsfm	100	98.446	MGP_CAROLIEiJ_G0015873	Tsfm	100	98.446	Mus_caroli
ENSMUSG00000040521	Tsfm	100	98.446	MGP_PahariEiJ_G0031212	Tsfm	100	98.446	Mus_pahari
ENSMUSG00000040521	Tsfm	100	99.482	MGP_SPRETEiJ_G0016699	Tsfm	100	99.482	Mus_spretus
ENSMUSG00000040521	Tsfm	98	85.263	ENSMPUG00000002051	TSFM	99	85.759	Mustela_putorius_furo
ENSMUSG00000040521	Tsfm	87	87.986	ENSMLUG00000005940	TSFM	100	84.568	Myotis_lucifugus
ENSMUSG00000040521	Tsfm	100	84.969	ENSNGAG00000014356	Tsfm	100	84.969	Nannospalax_galili
ENSMUSG00000040521	Tsfm	90	54.639	ENSNBRG00000016413	tsfm	92	54.639	Neolamprologus_brichardi
ENSMUSG00000040521	Tsfm	99	85.417	ENSNLEG00000017178	TSFM	100	87.077	Nomascus_leucogenys
ENSMUSG00000040521	Tsfm	75	78.740	ENSMEUG00000004047	TSFM	70	78.740	Notamacropus_eugenii
ENSMUSG00000040521	Tsfm	97	77.381	ENSOPRG00000006670	TSFM	100	77.457	Ochotona_princeps
ENSMUSG00000040521	Tsfm	97	82.278	ENSODEG00000001882	TSFM	100	81.538	Octodon_degus
ENSMUSG00000040521	Tsfm	97	47.003	ENSONIG00000019100	tsfm	98	47.003	Oreochromis_niloticus
ENSMUSG00000040521	Tsfm	93	73.267	ENSOCUG00000012512	TSFM	75	77.429	Oryctolagus_cuniculus
ENSMUSG00000040521	Tsfm	96	51.125	ENSORLG00000030201	tsfm	98	51.125	Oryzias_latipes
ENSMUSG00000040521	Tsfm	88	53.846	ENSORLG00020004740	tsfm	98	50.804	Oryzias_latipes_hni
ENSMUSG00000040521	Tsfm	88	53.659	ENSORLG00015022703	tsfm	98	50.161	Oryzias_latipes_hsok
ENSMUSG00000040521	Tsfm	85	54.015	ENSOMEG00000008934	tsfm	86	54.015	Oryzias_melastigma
ENSMUSG00000040521	Tsfm	99	81.538	ENSOGAG00000012235	TSFM	99	81.538	Otolemur_garnettii
ENSMUSG00000040521	Tsfm	93	86.755	ENSOARG00000005095	TSFM	100	81.416	Ovis_aries
ENSMUSG00000040521	Tsfm	99	84.375	ENSPPAG00000043428	TSFM	100	85.846	Pan_paniscus
ENSMUSG00000040521	Tsfm	89	87.197	ENSPPRG00000009667	TSFM	100	84.000	Panthera_pardus
ENSMUSG00000040521	Tsfm	89	87.543	ENSPTIG00000015290	TSFM	100	84.308	Panthera_tigris_altaica
ENSMUSG00000040521	Tsfm	99	84.375	ENSPTRG00000005152	TSFM	100	85.846	Pan_troglodytes
ENSMUSG00000040521	Tsfm	98	84.817	ENSPANG00000007866	TSFM	98	84.858	Papio_anubis
ENSMUSG00000040521	Tsfm	84	53.285	ENSPKIG00000008495	tsfm	85	53.285	Paramormyrops_kingsleyae
ENSMUSG00000040521	Tsfm	64	70.423	ENSPSIG00000015776	TSFM	96	70.423	Pelodiscus_sinensis
ENSMUSG00000040521	Tsfm	89	51.027	ENSPMGG00000007022	tsfm	92	51.027	Periophthalmus_magnuspinnatus
ENSMUSG00000040521	Tsfm	98	87.895	ENSPEMG00000000414	Tsfm	100	87.037	Peromyscus_maniculatus_bairdii
ENSMUSG00000040521	Tsfm	100	73.457	ENSPCIG00000023619	TSFM	100	73.457	Phascolarctos_cinereus
ENSMUSG00000040521	Tsfm	96	52.941	ENSPFOG00000010782	tsfm	98	52.244	Poecilia_formosa
ENSMUSG00000040521	Tsfm	91	53.535	ENSPLAG00000008105	tsfm	94	53.872	Poecilia_latipinna
ENSMUSG00000040521	Tsfm	96	52.688	ENSPMEG00000002567	tsfm	98	52.885	Poecilia_mexicana
ENSMUSG00000040521	Tsfm	96	52.151	ENSPREG00000016696	tsfm	98	52.244	Poecilia_reticulata
ENSMUSG00000040521	Tsfm	99	84.896	ENSPPYG00000004708	TSFM	85	86.462	Pongo_abelii
ENSMUSG00000040521	Tsfm	92	83.226	ENSPCAG00000003789	TSFM	100	81.548	Procavia_capensis
ENSMUSG00000040521	Tsfm	91	86.054	ENSPCOG00000021606	TSFM	100	83.742	Propithecus_coquereli
ENSMUSG00000040521	Tsfm	91	88.435	ENSPVAG00000012141	TSFM	100	85.846	Pteropus_vampyrus
ENSMUSG00000040521	Tsfm	96	54.839	ENSPNYG00000001230	tsfm	99	52.516	Pundamilia_nyererei
ENSMUSG00000040521	Tsfm	95	51.282	ENSPNAG00000003241	tsfm	98	51.282	Pygocentrus_nattereri
ENSMUSG00000040521	Tsfm	98	95.263	ENSRNOG00000048843	Tsfm	100	86.728	Rattus_norvegicus
ENSMUSG00000040521	Tsfm	90	88.699	ENSRBIG00000037278	TSFM	100	86.154	Rhinopithecus_bieti
ENSMUSG00000040521	Tsfm	99	85.417	ENSRROG00000031769	TSFM	100	86.462	Rhinopithecus_roxellana
ENSMUSG00000040521	Tsfm	96	74.441	ENSSBOG00000021465	TSFM	100	74.154	Saimiri_boliviensis_boliviensis
ENSMUSG00000040521	Tsfm	100	72.807	ENSSHAG00000009664	TSFM	100	72.807	Sarcophilus_harrisii
ENSMUSG00000040521	Tsfm	85	55.474	ENSSFOG00015014457	tsfm	88	55.474	Scleropages_formosus
ENSMUSG00000040521	Tsfm	91	55.618	ENSSMAG00000002467	tsfm	96	53.465	Scophthalmus_maximus
ENSMUSG00000040521	Tsfm	96	54.595	ENSSDUG00000006833	tsfm	97	52.412	Seriola_dumerili
ENSMUSG00000040521	Tsfm	97	53.476	ENSSLDG00000000715	tsfm	98	52.077	Seriola_lalandi_dorsalis
ENSMUSG00000040521	Tsfm	61	36.667	ENSSLDG00000005996	-	73	36.667	Seriola_lalandi_dorsalis
ENSMUSG00000040521	Tsfm	78	69.543	ENSSARG00000000785	-	85	68.932	Sorex_araneus
ENSMUSG00000040521	Tsfm	85	69.643	ENSSPUG00000006435	TSFM	100	69.643	Sphenodon_punctatus
ENSMUSG00000040521	Tsfm	96	53.514	ENSSPAG00000002548	tsfm	97	53.205	Stegastes_partitus
ENSMUSG00000040521	Tsfm	97	82.979	ENSSSCG00000037767	TSFM	88	82.891	Sus_scrofa
ENSMUSG00000040521	Tsfm	88	55.439	ENSTRUG00000003081	tsfm	91	55.439	Takifugu_rubripes
ENSMUSG00000040521	Tsfm	92	54.667	ENSTNIG00000014578	tsfm	95	54.667	Tetraodon_nigroviridis
ENSMUSG00000040521	Tsfm	97	72.619	ENSTBEG00000011603	TSFM	100	72.832	Tupaia_belangeri
ENSMUSG00000040521	Tsfm	94	87.789	ENSTTRG00000008351	TSFM	100	83.841	Tursiops_truncatus
ENSMUSG00000040521	Tsfm	90	87.285	ENSUAMG00000013142	TSFM	100	84.000	Ursus_americanus
ENSMUSG00000040521	Tsfm	90	86.942	ENSUMAG00000020123	TSFM	100	83.692	Ursus_maritimus
ENSMUSG00000040521	Tsfm	73	90.099	ENSVPAG00000000209	TSFM	72	90.099	Vicugna_pacos
ENSMUSG00000040521	Tsfm	83	84.502	ENSVVUG00000016735	TSFM	91	83.746	Vulpes_vulpes
ENSMUSG00000040521	Tsfm	90	64.746	ENSXETG00000009653	tsfm	98	64.746	Xenopus_tropicalis
ENSMUSG00000040521	Tsfm	96	53.763	ENSXMAG00000018468	tsfm	98	52.885	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003746	translation elongation factor activity	21873635.	IBA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005759	mitochondrial matrix	21873635.	IBA	Component
GO:0006412	translation	-	IEA	Process
GO:0006414	translational elongation	-	IEA	Process
GO:0070125	mitochondrial translational elongation	21873635.	IBA	Process
GO:0070129	regulation of mitochondrial translation	-	ISO	Process