EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000040620 (Gene tree)
Gene ID
216877
Gene Symbol
Dhx33
Alias
3110057P17Rik|9430096J02Rik|Ddx33
Full Name
DEAH (Asp-Glu-Ala-His) box polypeptide 33
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Minus strand
Length
20347 bases
Position
chr11:70984091-71004437
Accession
2445102
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000104167DEADPF00270.292.9e-0611
ENSMUSP00000136051HA2PF04408.231.3e-2011
ENSMUSP00000104167HA2PF04408.232.4e-2011
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
23912277The RNA binding protein repertoire of embryonic stem cellsIC & mESC2013 Aug 4Kwon SCDOI: 10.1038/nsmb.2638
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000124464-1835-ENSMUSP00000136051474 (aa)-A3QK59
ENSMUST00000178218-2885--- (aa)--
ENSMUST00000146203-1422-ENSMUSP00000136913106 (aa)-J3QNQ9
ENSMUST00000123860-700--- (aa)--
ENSMUST00000155044-565-ENSMUSP0000013678247 (aa)-J3QJZ5
ENSMUST00000178111-750--- (aa)--
ENSMUST00000049048-2266-ENSMUSP0000003801882 (aa)-K3W4M7
ENSMUST00000179635-3474--- (aa)--
ENSMUST00000108527-5184XM_006532927ENSMUSP00000104167698 (aa)XP_006532990Q80VY9
Gene Model
Click here to download ENSMUSG00000040620's gene model file
Pathways
Pathway IDPathway NameSource
mmu04621NOD-like receptor signaling pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000040620's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000040620Dhx338937.348ENSMUSG00000018425Dhx409932.766
ENSMUSG00000040620Dhx339041.699ENSMUSG00000029480Dhx376141.667
ENSMUSG00000040620Dhx337731.000ENSMUSG00000054003Tdrd99532.448
ENSMUSG00000040620Dhx339346.472ENSMUSG00000024422Dhx166146.472
ENSMUSG00000040620Dhx339230.781ENSMUSG00000009145Dqx19130.781
ENSMUSG00000040620Dhx339242.553ENSMUSG00000029169Dhx158342.664
ENSMUSG00000040620Dhx339044.164ENSMUSG00000037993Dhx385144.164
ENSMUSG00000040620Dhx338636.816ENSMUSG00000027770Dhx366336.816
ENSMUSG00000040620Dhx339047.068ENSMUSG00000034931Dhx85347.068
ENSMUSG00000040620Dhx339842.979ENSMUSG00000027655Dhx359742.877
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000040620Dhx3310092.362ENSG00000005100DHX3310092.645Homo_sapiens
ENSMUSG00000040620Dhx3310069.628ENSAPOG00000010132dhx3310069.628Acanthochromis_polyacanthus
ENSMUSG00000040620Dhx339584.077ENSAMEG00000006026DHX339587.207Ailuropoda_melanoleuca
ENSMUSG00000040620Dhx3310069.220ENSACIG00000012591dhx3310069.341Amphilophus_citrinellus
ENSMUSG00000040620Dhx3310069.198ENSAOCG00000007008dhx3310069.198Amphiprion_ocellaris
ENSMUSG00000040620Dhx3310066.191ENSAPEG00000013599dhx3310066.191Amphiprion_percula
ENSMUSG00000040620Dhx3310069.771ENSATEG00000005019dhx3310069.484Anabas_testudineus
ENSMUSG00000040620Dhx338885.270ENSAPLG00000015593DHX3310085.270Anas_platyrhynchos
ENSMUSG00000040620Dhx339276.168ENSACAG00000015095DHX339775.655Anolis_carolinensis
ENSMUSG00000040620Dhx339494.521ENSANAG00000037748DHX339894.537Aotus_nancymaae
ENSMUSG00000040620Dhx3310069.914ENSACLG00000025610dhx3310069.914Astatotilapia_calliptera
ENSMUSG00000040620Dhx3310071.920ENSAMXG00000015875dhx338871.920Astyanax_mexicanus
ENSMUSG00000040620Dhx3310089.377ENSBTAG00000032083DHX3310089.377Bos_taurus
ENSMUSG00000040620Dhx339436.941WBGene00020263let-3558036.941Caenorhabditis_elegans
ENSMUSG00000040620Dhx3310092.786ENSCJAG00000011321DHX3310093.069Callithrix_jacchus
ENSMUSG00000040620Dhx338889.723ENSCAFG00000015535DHX339989.723Canis_familiaris
ENSMUSG00000040620Dhx3310088.395ENSCAFG00020016360DHX3310088.395Canis_lupus_dingo
ENSMUSG00000040620Dhx3310090.987ENSCHIG00000014722DHX3310090.987Capra_hircus
ENSMUSG00000040620Dhx3310088.967ENSTSYG00000005995DHX3310088.967Carlito_syrichta
ENSMUSG00000040620Dhx338793.934ENSCAPG00000009660DHX339793.934Cavia_aperea
ENSMUSG00000040620Dhx3310092.120ENSCPOG00000003681DHX3310092.120Cavia_porcellus
ENSMUSG00000040620Dhx3310092.645ENSCCAG00000027955DHX3310092.928Cebus_capucinus
ENSMUSG00000040620Dhx3310091.938ENSCATG00000029157DHX3310092.221Cercocebus_atys
ENSMUSG00000040620Dhx3310091.632ENSCLAG00000014171DHX3310092.050Chinchilla_lanigera
ENSMUSG00000040620Dhx3310078.011ENSCSAG00000012784DHX339378.151Chlorocebus_sabaeus
ENSMUSG00000040620Dhx338986.667ENSCHOG00000008707DHX339086.667Choloepus_hoffmanni
ENSMUSG00000040620Dhx3310080.659ENSCPBG00000027741DHX3310080.659Chrysemys_picta_bellii
ENSMUSG00000040620Dhx339157.300ENSCING00000009139-10057.300Ciona_intestinalis
ENSMUSG00000040620Dhx3310093.201ENSCANG00000034385DHX3310093.201Colobus_angolensis_palliatus
ENSMUSG00000040620Dhx3310097.147ENSCGRG00001023101Dhx3310097.147Cricetulus_griseus_chok1gshd
ENSMUSG00000040620Dhx338796.557ENSCGRG00000010329Dhx3310096.557Cricetulus_griseus_crigri
ENSMUSG00000040620Dhx3310069.504ENSCSEG00000011017dhx3310069.628Cynoglossus_semilaevis
ENSMUSG00000040620Dhx3310068.768ENSCVAG00000008998dhx3310068.481Cyprinodon_variegatus
ENSMUSG00000040620Dhx3310070.739ENSDARG00000051785dhx3310070.917Danio_rerio
ENSMUSG00000040620Dhx3310091.785ENSDNOG00000016865DHX339291.785Dasypus_novemcinctus
ENSMUSG00000040620Dhx336192.727ENSDORG00000014344Dhx3310092.727Dipodomys_ordii
ENSMUSG00000040620Dhx339146.288FBgn0032194CG49019146.288Drosophila_melanogaster
ENSMUSG00000040620Dhx339044.444ENSEBUG00000008342dhx339544.444Eptatretus_burgeri
ENSMUSG00000040620Dhx3310093.484ENSEASG00005015338DHX3310093.484Equus_asinus_asinus
ENSMUSG00000040620Dhx3310093.343ENSECAG00000010272DHX3310093.343Equus_caballus
ENSMUSG00000040620Dhx338788.615ENSEEUG00000008589-7296.491Erinaceus_europaeus
ENSMUSG00000040620Dhx3310069.198ENSELUG00000020257dhx3310069.198Esox_lucius
ENSMUSG00000040620Dhx3310088.269ENSFCAG00000014755DHX3310088.269Felis_catus
ENSMUSG00000040620Dhx3310072.183ENSFALG00000009785DHX3310072.183Ficedula_albicollis
ENSMUSG00000040620Dhx3310089.971ENSFDAG00000003334DHX3310089.971Fukomys_damarensis
ENSMUSG00000040620Dhx338668.750ENSFHEG00000014253dhx339568.421Fundulus_heteroclitus
ENSMUSG00000040620Dhx3310069.054ENSGMOG00000012350dhx3310068.911Gadus_morhua
ENSMUSG00000040620Dhx3310069.054ENSGAFG00000014811dhx339674.141Gambusia_affinis
ENSMUSG00000040620Dhx3310069.341ENSGACG00000020229dhx3310069.341Gasterosteus_aculeatus
ENSMUSG00000040620Dhx339583.812ENSGAGG00000013448DHX339984.299Gopherus_agassizii
ENSMUSG00000040620Dhx3310092.079ENSGGOG00000002748DHX3310092.362Gorilla_gorilla
ENSMUSG00000040620Dhx3310069.914ENSHBUG00000017415dhx3310069.914Haplochromis_burtoni
ENSMUSG00000040620Dhx3310091.250ENSHGLG00000014753DHX3310091.977Heterocephalus_glaber_female
ENSMUSG00000040620Dhx339594.118ENSHGLG00100012963DHX339994.073Heterocephalus_glaber_male
ENSMUSG00000040620Dhx3310069.198ENSHCOG00000011161dhx3310069.198Hippocampus_comes
ENSMUSG00000040620Dhx3310072.143ENSIPUG00000011594dhx3310071.857Ictalurus_punctatus
ENSMUSG00000040620Dhx3310094.722ENSSTOG00000003298DHX3310095.007Ictidomys_tridecemlineatus
ENSMUSG00000040620Dhx3310093.857ENSJJAG00000016626Dhx3310093.857Jaculus_jaculus
ENSMUSG00000040620Dhx3310068.936ENSKMAG00000013595dhx3310069.054Kryptolebias_marmoratus
ENSMUSG00000040620Dhx3310070.344ENSLBEG00000005703dhx3310070.344Labrus_bergylta
ENSMUSG00000040620Dhx339976.012ENSLACG00000018174DHX339976.012Latimeria_chalumnae
ENSMUSG00000040620Dhx338063.734ENSLOCG00000002764dhx339763.734Lepisosteus_oculatus
ENSMUSG00000040620Dhx3310092.550ENSLAFG00000007136DHX3310092.550Loxodonta_africana
ENSMUSG00000040620Dhx3310092.504ENSMFAG00000042578DHX3310092.786Macaca_fascicularis
ENSMUSG00000040620Dhx3310092.504ENSMMUG00000006594DHX3310092.786Macaca_mulatta
ENSMUSG00000040620Dhx3310082.195ENSMNEG00000034809DHX3310082.609Macaca_nemestrina
ENSMUSG00000040620Dhx3310092.079ENSMLEG00000034236DHX3310092.362Mandrillus_leucophaeus
ENSMUSG00000040620Dhx3310070.774ENSMAMG00000005936dhx3310070.487Mastacembelus_armatus
ENSMUSG00000040620Dhx3310069.771ENSMZEG00005023292dhx3310069.771Maylandia_zebra
ENSMUSG00000040620Dhx338885.505ENSMGAG00000003125DHX3310085.505Meleagris_gallopavo
ENSMUSG00000040620Dhx3310097.421ENSMAUG00000011100Dhx3310097.421Mesocricetus_auratus
ENSMUSG00000040620Dhx3310092.645ENSMICG00000012715DHX3310092.645Microcebus_murinus
ENSMUSG00000040620Dhx3310097.278ENSMOCG00000016069Dhx3310097.278Microtus_ochrogaster
ENSMUSG00000040620Dhx3310067.618ENSMMOG00000005732dhx3310067.618Mola_mola
ENSMUSG00000040620Dhx339979.197ENSMODG00000016649DHX339979.197Monodelphis_domestica
ENSMUSG00000040620Dhx339969.460ENSMALG00000000923dhx339969.297Monopterus_albus
ENSMUSG00000040620Dhx3310099.142MGP_CAROLIEiJ_G0016657Dhx3310099.142Mus_caroli
ENSMUSG00000040620Dhx3310099.000MGP_PahariEiJ_G0017788Dhx3310099.000Mus_pahari
ENSMUSG00000040620Dhx3310099.578MGP_SPRETEiJ_G0017493Dhx3310099.578Mus_spretus
ENSMUSG00000040620Dhx337788.015ENSMPUG00000011250DHX3310088.015Mustela_putorius_furo
ENSMUSG00000040620Dhx3310090.935ENSMLUG00000014439DHX339291.218Myotis_lucifugus
ENSMUSG00000040620Dhx3310095.279ENSNGAG00000017139Dhx3310095.279Nannospalax_galili
ENSMUSG00000040620Dhx3310069.628ENSNBRG00000017674dhx3310069.628Neolamprologus_brichardi
ENSMUSG00000040620Dhx336993.231ENSNLEG00000009098-10093.812Nomascus_leucogenys
ENSMUSG00000040620Dhx338380.862ENSMEUG00000009202DHX3310080.862Notamacropus_eugenii
ENSMUSG00000040620Dhx3310090.831ENSOPRG00000013163DHX3310090.831Ochotona_princeps
ENSMUSG00000040620Dhx3310093.123ENSODEG00000017026DHX3310093.123Octodon_degus
ENSMUSG00000040620Dhx339970.418ENSONIG00000017480dhx339570.418Oreochromis_niloticus
ENSMUSG00000040620Dhx335966.140ENSOANG00000000524-10066.140Ornithorhynchus_anatinus
ENSMUSG00000040620Dhx335670.886ENSOANG00000002808-10070.886Ornithorhynchus_anatinus
ENSMUSG00000040620Dhx3310085.376ENSOCUG00000004805DHX3310086.620Oryctolagus_cuniculus
ENSMUSG00000040620Dhx3310068.481ENSORLG00000011817dhx3310068.195Oryzias_latipes
ENSMUSG00000040620Dhx3310068.911ENSORLG00020016766dhx3310068.625Oryzias_latipes_hni
ENSMUSG00000040620Dhx339272.543ENSORLG00015022753dhx339872.543Oryzias_latipes_hsok
ENSMUSG00000040620Dhx339969.584ENSOMEG00000010438dhx339969.154Oryzias_melastigma
ENSMUSG00000040620Dhx339990.935ENSOGAG00000001611DHX339390.960Otolemur_garnettii
ENSMUSG00000040620Dhx339491.351ENSOARG00000003235DHX339691.377Ovis_aries
ENSMUSG00000040620Dhx3310092.362ENSPPAG00000038926DHX3310092.645Pan_paniscus
ENSMUSG00000040620Dhx3310087.249ENSPPRG00000009202DHX3310087.249Panthera_pardus
ENSMUSG00000040620Dhx336970.981ENSPTIG00000018141DHX338570.981Panthera_tigris_altaica
ENSMUSG00000040620Dhx3310092.221ENSPTRG00000008632DHX3310092.504Pan_troglodytes
ENSMUSG00000040620Dhx3310092.221ENSPANG00000024297DHX3310092.504Papio_anubis
ENSMUSG00000040620Dhx3310072.636ENSPKIG00000017401dhx3310072.636Paramormyrops_kingsleyae
ENSMUSG00000040620Dhx338884.779ENSPSIG00000006293DHX339384.779Pelodiscus_sinensis
ENSMUSG00000040620Dhx3310070.057ENSPMGG00000013896dhx3310070.057Periophthalmus_magnuspinnatus
ENSMUSG00000040620Dhx3310096.418ENSPEMG00000016472Dhx3310096.418Peromyscus_maniculatus_bairdii
ENSMUSG00000040620Dhx3310079.685ENSPCIG00000020074DHX3310079.256Phascolarctos_cinereus
ENSMUSG00000040620Dhx3310068.052ENSPFOG00000009426dhx3310067.765Poecilia_formosa
ENSMUSG00000040620Dhx3310068.338ENSPLAG00000017730dhx3310068.052Poecilia_latipinna
ENSMUSG00000040620Dhx3310068.338ENSPMEG00000012075dhx339972.859Poecilia_mexicana
ENSMUSG00000040620Dhx3310068.526ENSPREG00000008239dhx3310068.240Poecilia_reticulata
ENSMUSG00000040620Dhx3310092.362ENSPPYG00000007871DHX339292.645Pongo_abelii
ENSMUSG00000040620Dhx3310081.471ENSPCAG00000006190DHX3310081.471Procavia_capensis
ENSMUSG00000040620Dhx3310092.918ENSPCOG00000007524DHX3310092.918Propithecus_coquereli
ENSMUSG00000040620Dhx3310091.785ENSPVAG00000002467DHX3310091.785Pteropus_vampyrus
ENSMUSG00000040620Dhx3310069.771ENSPNYG00000021648dhx3310069.771Pundamilia_nyererei
ENSMUSG00000040620Dhx3310071.203ENSPNAG00000020048dhx3310071.203Pygocentrus_nattereri
ENSMUSG00000040620Dhx3310097.708ENSRNOG00000007054Dhx3310097.708Rattus_norvegicus
ENSMUSG00000040620Dhx3310092.504ENSRBIG00000040087DHX3310092.786Rhinopithecus_bieti
ENSMUSG00000040620Dhx3310092.645ENSRROG00000038052DHX3310092.928Rhinopithecus_roxellana
ENSMUSG00000040620Dhx339039.422YKL078W-8839.757Saccharomyces_cerevisiae
ENSMUSG00000040620Dhx3310091.691ENSSBOG00000020529DHX3310091.218Saimiri_boliviensis_boliviensis
ENSMUSG00000040620Dhx3310075.522ENSSHAG00000002762DHX3310082.382Sarcophilus_harrisii
ENSMUSG00000040620Dhx339974.322ENSSFOG00015001783dhx339974.322Scleropages_formosus
ENSMUSG00000040620Dhx3310069.484ENSSMAG00000000497dhx3310069.484Scophthalmus_maximus
ENSMUSG00000040620Dhx3310069.054ENSSDUG00000017798dhx3310069.054Seriola_dumerili
ENSMUSG00000040620Dhx3310068.338ENSSLDG00000020132dhx3310068.338Seriola_lalandi_dorsalis
ENSMUSG00000040620Dhx3310090.401ENSSARG00000009813DHX3310090.401Sorex_araneus
ENSMUSG00000040620Dhx337773.727ENSSPUG00000010498-10083.416Sphenodon_punctatus
ENSMUSG00000040620Dhx336967.385ENSSPAG00000003711-10069.734Stegastes_partitus
ENSMUSG00000040620Dhx3310069.341ENSSPAG00000012860dhx3310069.341Stegastes_partitus
ENSMUSG00000040620Dhx3310087.268ENSSSCG00000039064DHX3310087.268Sus_scrofa
ENSMUSG00000040620Dhx339277.465ENSTGUG00000004226DHX3310077.465Taeniopygia_guttata
ENSMUSG00000040620Dhx3310069.187ENSTRUG00000003395dhx3310069.187Takifugu_rubripes
ENSMUSG00000040620Dhx339964.205ENSTNIG00000008546dhx3310064.205Tetraodon_nigroviridis
ENSMUSG00000040620Dhx336594.619ENSTBEG00000008531DHX335995.031Tupaia_belangeri
ENSMUSG00000040620Dhx337387.008ENSTTRG00000014788DHX338487.008Tursiops_truncatus
ENSMUSG00000040620Dhx3310089.971ENSUAMG00000012182DHX3310089.971Ursus_americanus
ENSMUSG00000040620Dhx339589.275ENSVVUG00000027336DHX339989.193Vulpes_vulpes
ENSMUSG00000040620Dhx339976.667ENSXETG00000009173dhx339676.556Xenopus_tropicalis
ENSMUSG00000040620Dhx3310068.911ENSXCOG00000004969dhx3310068.625Xiphophorus_couchianus
ENSMUSG00000040620Dhx3310068.911ENSXMAG00000005679dhx3310068.625Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000166nucleotide binding-IEAFunction
GO:0000182rDNA binding21930779.IDAFunction
GO:0000182rDNA binding-ISOFunction
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding21873635.IBAFunction
GO:0003725double-stranded RNA binding24037184.IDAFunction
GO:0003725double-stranded RNA binding-ISOFunction
GO:0003729mRNA binding-ISOFunction
GO:0004386helicase activity-IEAFunction
GO:0005515protein binding24037184.IPIFunction
GO:0005524ATP binding-IEAFunction
GO:0005634nucleus-ISOComponent
GO:0005654nucleoplasm21930779.IDAComponent
GO:0005654nucleoplasm-ISOComponent
GO:0005730nucleolus21873635.IBAComponent
GO:0005730nucleolus21930779.IDAComponent
GO:0005730nucleolus-ISOComponent
GO:0005737cytoplasm-ISOComponent
GO:0006413translational initiation26100019.IDAProcess
GO:0016787hydrolase activity-IEAFunction
GO:0032481positive regulation of type I interferon production24037184.IMPProcess
GO:0033613activating transcription factor binding21930779.IPIFunction
GO:0034459ATP-dependent 3'-5' RNA helicase activity21873635.IBAFunction
GO:0043023ribosomal large subunit binding-ISOFunction
GO:0043410positive regulation of MAPK cascade24037184.IMPProcess
GO:0045943positive regulation of transcription by RNA polymerase I21873635.IBAProcess
GO:0045943positive regulation of transcription by RNA polymerase I21930779.IDAProcess
GO:0045943positive regulation of transcription by RNA polymerase I-ISOProcess
GO:0051092positive regulation of NF-kappaB transcription factor activity24037184.IMPProcess
GO:0061702inflammasome complex-IEAComponent
GO:0072559NLRP3 inflammasome complex-ISOComponent
GO:1900227positive regulation of NLRP3 inflammasome complex assembly-ISOProcess

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