EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000040627 (Gene tree)
Gene ID: 11628
Gene Symbol: Aicda
Alias: Aid
Full Name: activation-induced cytidine deaminase
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 10380 bases
Position: chr6:122553801-122564180
Accession: 1342279
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000040524	APOBEC_N	PF08210.11	2.1e-62	1	1
ENSMUSP00000125093	APOBEC_N	PF08210.11	8.1e-12	1	1
ENSMUSP00000040524	APOBEC_C	PF05240.14	4.2e-28	1	1
ENSMUSP00000125093	APOBEC_C	PF05240.14	4.6e-13	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000160685	-	1292	-	ENSMUSP00000125093	60 (aa)	-	E0CXQ9
ENSMUST00000043301	-	2405	-	ENSMUSP00000040524	198 (aa)	-	Q9WVE0

Gene Model

Click here to download ENSMUSG00000040627's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04672	Intestinal immune network for IgA production	KEGG
mmu05340	Primary immunodeficiency	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000040627's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000040627	Aicda	86	34.483	ENSMUSG00000040694	Apobec2	77	34.483
ENSMUSG00000040627	Aicda	91	39.344	ENSMUSG00000009585	Apobec3	96	40.964
ENSMUSG00000040627	Aicda	53	41.509	ENSMUSG00000040613	Apobec1	56	39.706

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000040627	Aicda	100	93.333	ENSG00000111732	AICDA	100	92.424	Homo_sapiens
ENSMUSG00000040627	Aicda	100	61.667	ENSAPOG00000023552	aicda	98	58.947	Acanthochromis_polyacanthus
ENSMUSG00000040627	Aicda	99	94.388	ENSAMEG00000007082	AICDA	99	94.388	Ailuropoda_melanoleuca
ENSMUSG00000040627	Aicda	98	60.406	ENSACIG00000012301	aicda	100	60.406	Amphilophus_citrinellus
ENSMUSG00000040627	Aicda	100	61.667	ENSAOCG00000000482	aicda	100	58.291	Amphiprion_ocellaris
ENSMUSG00000040627	Aicda	100	61.667	ENSAPEG00000009755	aicda	100	58.291	Amphiprion_percula
ENSMUSG00000040627	Aicda	100	63.333	ENSATEG00000022035	aicda	97	61.111	Anabas_testudineus
ENSMUSG00000040627	Aicda	100	88.333	ENSAPLG00000013954	AICDA	98	88.265	Anas_platyrhynchos
ENSMUSG00000040627	Aicda	98	93.220	ENSACAG00000017441	AICDA	99	88.384	Anolis_carolinensis
ENSMUSG00000040627	Aicda	100	94.949	ENSANAG00000022438	AICDA	100	94.949	Aotus_nancymaae
ENSMUSG00000040627	Aicda	100	60.000	ENSACLG00000022679	aicda	100	60.406	Astatotilapia_calliptera
ENSMUSG00000040627	Aicda	71	60.265	ENSAMXG00000037242	aicda	63	60.265	Astyanax_mexicanus
ENSMUSG00000040627	Aicda	100	93.333	ENSBTAG00000018849	AICDA	100	91.457	Bos_taurus
ENSMUSG00000040627	Aicda	100	94.949	ENSCJAG00000018856	AICDA	100	94.949	Callithrix_jacchus
ENSMUSG00000040627	Aicda	100	94.444	ENSCAFG00000013897	AICDA	85	94.444	Canis_familiaris
ENSMUSG00000040627	Aicda	100	93.434	ENSCAFG00020003515	AICDA	97	93.434	Canis_lupus_dingo
ENSMUSG00000040627	Aicda	100	95.000	ENSCHIG00000012409	AICDA	100	89.950	Capra_hircus
ENSMUSG00000040627	Aicda	100	90.909	ENSTSYG00000011304	AICDA	100	90.909	Carlito_syrichta
ENSMUSG00000040627	Aicda	91	92.265	ENSCPOG00000037838	-	100	92.265	Cavia_porcellus
ENSMUSG00000040627	Aicda	100	91.667	ENSCPOG00000039255	-	100	92.746	Cavia_porcellus
ENSMUSG00000040627	Aicda	100	91.667	ENSCPOG00000030440	-	100	93.264	Cavia_porcellus
ENSMUSG00000040627	Aicda	100	76.263	ENSCCAG00000030398	AICDA	100	76.263	Cebus_capucinus
ENSMUSG00000040627	Aicda	100	95.000	ENSCATG00000039986	AICDA	100	94.949	Cercocebus_atys
ENSMUSG00000040627	Aicda	100	95.000	ENSCSAG00000009663	AICDA	100	94.898	Chlorocebus_sabaeus
ENSMUSG00000040627	Aicda	100	71.859	ENSCHOG00000010248	AICDA	100	71.859	Choloepus_hoffmanni
ENSMUSG00000040627	Aicda	98	91.525	ENSCPBG00000014337	AICDA	98	90.306	Chrysemys_picta_bellii
ENSMUSG00000040627	Aicda	100	95.000	ENSCANG00000035131	AICDA	100	94.949	Colobus_angolensis_palliatus
ENSMUSG00000040627	Aicda	100	97.980	ENSCGRG00001009654	Aicda	100	97.980	Cricetulus_griseus_chok1gshd
ENSMUSG00000040627	Aicda	100	97.980	ENSCGRG00000013829	Aicda	100	97.980	Cricetulus_griseus_crigri
ENSMUSG00000040627	Aicda	100	61.667	ENSCSEG00000018589	aicda	98	57.143	Cynoglossus_semilaevis
ENSMUSG00000040627	Aicda	100	61.667	ENSCVAG00000001218	aicda	99	60.000	Cyprinodon_variegatus
ENSMUSG00000040627	Aicda	100	66.667	ENSDARG00000015734	aicda	98	63.768	Danio_rerio
ENSMUSG00000040627	Aicda	92	81.818	ENSDORG00000026277	-	100	81.818	Dipodomys_ordii
ENSMUSG00000040627	Aicda	90	91.620	ENSETEG00000014702	AICDA	99	91.620	Echinops_telfairi
ENSMUSG00000040627	Aicda	100	95.000	ENSEASG00005015947	AICDA	100	93.434	Equus_asinus_asinus
ENSMUSG00000040627	Aicda	100	95.000	ENSECAG00000018578	AICDA	100	94.949	Equus_caballus
ENSMUSG00000040627	Aicda	90	93.296	ENSEEUG00000013899	AICDA	99	93.296	Erinaceus_europaeus
ENSMUSG00000040627	Aicda	99	58.852	ENSELUG00000016293	aicda	98	58.852	Esox_lucius
ENSMUSG00000040627	Aicda	100	94.444	ENSFCAG00000006052	AICDA	85	94.444	Felis_catus
ENSMUSG00000040627	Aicda	100	85.000	ENSFALG00000007261	AICDA	100	81.633	Ficedula_albicollis
ENSMUSG00000040627	Aicda	91	85.635	ENSFDAG00000011141	AICDA	100	85.635	Fukomys_damarensis
ENSMUSG00000040627	Aicda	100	58.333	ENSFHEG00000015733	aicda	99	56.796	Fundulus_heteroclitus
ENSMUSG00000040627	Aicda	100	63.333	ENSGMOG00000004114	aicda	98	58.768	Gadus_morhua
ENSMUSG00000040627	Aicda	100	87.879	ENSGALG00000014280	AICDA	100	87.879	Gallus_gallus
ENSMUSG00000040627	Aicda	100	61.667	ENSGAFG00000013758	aicda	95	55.556	Gambusia_affinis
ENSMUSG00000040627	Aicda	100	60.000	ENSGACG00000010521	aicda	98	55.714	Gasterosteus_aculeatus
ENSMUSG00000040627	Aicda	99	89.286	ENSGAGG00000011838	-	98	89.286	Gopherus_agassizii
ENSMUSG00000040627	Aicda	100	89.394	ENSGAGG00000011839	-	100	89.394	Gopherus_agassizii
ENSMUSG00000040627	Aicda	100	93.333	ENSGGOG00000003338	AICDA	98	92.347	Gorilla_gorilla
ENSMUSG00000040627	Aicda	100	60.000	ENSHBUG00000014333	aicda	100	60.406	Haplochromis_burtoni
ENSMUSG00000040627	Aicda	99	94.898	ENSHGLG00000001443	AICDA	98	94.898	Heterocephalus_glaber_female
ENSMUSG00000040627	Aicda	100	94.444	ENSHGLG00100001381	AICDA	100	94.444	Heterocephalus_glaber_male
ENSMUSG00000040627	Aicda	100	60.000	ENSHCOG00000018886	aicda	97	58.854	Hippocampus_comes
ENSMUSG00000040627	Aicda	100	58.333	ENSIPUG00000007380	aicda	99	57.416	Ictalurus_punctatus
ENSMUSG00000040627	Aicda	100	95.455	ENSSTOG00000010972	AICDA	100	95.455	Ictidomys_tridecemlineatus
ENSMUSG00000040627	Aicda	91	96.685	ENSJJAG00000000908	Aicda	100	96.685	Jaculus_jaculus
ENSMUSG00000040627	Aicda	100	61.667	ENSKMAG00000006359	aicda	100	59.799	Kryptolebias_marmoratus
ENSMUSG00000040627	Aicda	100	61.667	ENSLBEG00000015351	aicda	100	56.190	Labrus_bergylta
ENSMUSG00000040627	Aicda	71	72.857	ENSLACG00000009320	aicda	94	72.857	Latimeria_chalumnae
ENSMUSG00000040627	Aicda	98	79.661	ENSLACG00000000734	-	98	79.661	Latimeria_chalumnae
ENSMUSG00000040627	Aicda	98	67.797	ENSLOCG00000008158	aicda	98	64.286	Lepisosteus_oculatus
ENSMUSG00000040627	Aicda	98	94.915	ENSLAFG00000000721	AICDA	100	91.282	Loxodonta_africana
ENSMUSG00000040627	Aicda	100	95.000	ENSMFAG00000037834	AICDA	100	94.949	Macaca_fascicularis
ENSMUSG00000040627	Aicda	100	95.000	ENSMMUG00000019134	AICDA	100	94.949	Macaca_mulatta
ENSMUSG00000040627	Aicda	100	95.000	ENSMNEG00000043421	AICDA	100	94.949	Macaca_nemestrina
ENSMUSG00000040627	Aicda	100	95.000	ENSMLEG00000040938	AICDA	100	94.949	Mandrillus_leucophaeus
ENSMUSG00000040627	Aicda	100	95.000	ENSMLEG00000039759	-	99	85.799	Mandrillus_leucophaeus
ENSMUSG00000040627	Aicda	100	60.000	ENSMAMG00000020032	aicda	98	58.095	Mastacembelus_armatus
ENSMUSG00000040627	Aicda	100	60.000	ENSMZEG00005016678	aicda	100	60.406	Maylandia_zebra
ENSMUSG00000040627	Aicda	99	87.755	ENSMGAG00000013942	AICDA	100	87.755	Meleagris_gallopavo
ENSMUSG00000040627	Aicda	100	97.980	ENSMAUG00000012229	Aicda	100	97.980	Mesocricetus_auratus
ENSMUSG00000040627	Aicda	100	92.965	ENSMICG00000011695	AICDA	100	92.965	Microcebus_murinus
ENSMUSG00000040627	Aicda	100	96.667	ENSMOCG00000022460	Aicda	100	96.465	Microtus_ochrogaster
ENSMUSG00000040627	Aicda	100	60.000	ENSMMOG00000016707	aicda	98	56.667	Mola_mola
ENSMUSG00000040627	Aicda	100	93.333	ENSMODG00000018002	AICDA	100	90.155	Monodelphis_domestica
ENSMUSG00000040627	Aicda	100	60.000	ENSMALG00000010442	aicda	98	56.667	Monopterus_albus
ENSMUSG00000040627	Aicda	72	100.000	MGP_CAROLIEiJ_G0028824	-	100	100.000	Mus_caroli
ENSMUSG00000040627	Aicda	100	98.990	MGP_PahariEiJ_G0022579	Aicda	100	98.990	Mus_pahari
ENSMUSG00000040627	Aicda	100	100.000	MGP_SPRETEiJ_G0029856	Aicda	100	100.000	Mus_spretus
ENSMUSG00000040627	Aicda	100	94.949	ENSMPUG00000017533	AICDA	94	94.949	Mustela_putorius_furo
ENSMUSG00000040627	Aicda	99	94.898	ENSMLUG00000007881	AICDA	99	94.898	Myotis_lucifugus
ENSMUSG00000040627	Aicda	100	95.455	ENSNGAG00000023430	Aicda	100	95.455	Nannospalax_galili
ENSMUSG00000040627	Aicda	100	60.000	ENSNBRG00000000070	aicda	96	60.526	Neolamprologus_brichardi
ENSMUSG00000040627	Aicda	100	92.929	ENSNLEG00000001917	AICDA	100	92.929	Nomascus_leucogenys
ENSMUSG00000040627	Aicda	98	94.915	ENSMEUG00000006570	AICDA	98	89.796	Notamacropus_eugenii
ENSMUSG00000040627	Aicda	100	91.667	ENSOPRG00000013486	AICDA	100	90.256	Ochotona_princeps
ENSMUSG00000040627	Aicda	100	93.333	ENSODEG00000001235	AICDA	100	95.028	Octodon_degus
ENSMUSG00000040627	Aicda	100	58.333	ENSONIG00000012823	aicda	98	56.190	Oreochromis_niloticus
ENSMUSG00000040627	Aicda	99	94.898	ENSOANG00000007150	AICDA	99	94.898	Ornithorhynchus_anatinus
ENSMUSG00000040627	Aicda	100	95.000	ENSOCUG00000023739	AICDA	100	93.782	Oryctolagus_cuniculus
ENSMUSG00000040627	Aicda	100	60.000	ENSORLG00000011705	aicda	100	58.500	Oryzias_latipes
ENSMUSG00000040627	Aicda	100	60.000	ENSORLG00020006547	aicda	100	58.500	Oryzias_latipes_hni
ENSMUSG00000040627	Aicda	100	60.000	ENSORLG00015012504	aicda	98	58.883	Oryzias_latipes_hsok
ENSMUSG00000040627	Aicda	98	61.017	ENSOMEG00000011880	aicda	97	58.794	Oryzias_melastigma
ENSMUSG00000040627	Aicda	99	94.898	ENSOGAG00000026770	AICDA	99	94.898	Otolemur_garnettii
ENSMUSG00000040627	Aicda	100	95.000	ENSOARG00000001982	AICDA	100	89.055	Ovis_aries
ENSMUSG00000040627	Aicda	100	93.333	ENSPPAG00000038169	AICDA	100	92.424	Pan_paniscus
ENSMUSG00000040627	Aicda	100	94.444	ENSPPRG00000012985	AICDA	100	94.444	Panthera_pardus
ENSMUSG00000040627	Aicda	100	94.444	ENSPTIG00000020074	AICDA	100	94.444	Panthera_tigris_altaica
ENSMUSG00000040627	Aicda	100	93.333	ENSPTRG00000004640	AICDA	100	92.929	Pan_troglodytes
ENSMUSG00000040627	Aicda	100	95.000	ENSPANG00000017883	AICDA	100	94.949	Papio_anubis
ENSMUSG00000040627	Aicda	100	66.667	ENSPKIG00000001499	aicda	100	62.632	Paramormyrops_kingsleyae
ENSMUSG00000040627	Aicda	98	91.525	ENSPSIG00000013283	AICDA	100	89.796	Pelodiscus_sinensis
ENSMUSG00000040627	Aicda	100	65.000	ENSPMGG00000014598	aicda	93	59.799	Periophthalmus_magnuspinnatus
ENSMUSG00000040627	Aicda	100	95.960	ENSPEMG00000008352	Aicda	100	95.960	Peromyscus_maniculatus_bairdii
ENSMUSG00000040627	Aicda	100	93.333	ENSPCIG00000023974	AICDA	100	89.899	Phascolarctos_cinereus
ENSMUSG00000040627	Aicda	90	55.357	ENSPFOG00000011197	aicda	97	55.357	Poecilia_formosa
ENSMUSG00000040627	Aicda	100	60.000	ENSPLAG00000014098	aicda	100	55.238	Poecilia_latipinna
ENSMUSG00000040627	Aicda	100	60.000	ENSPMEG00000024203	aicda	98	55.238	Poecilia_mexicana
ENSMUSG00000040627	Aicda	100	60.000	ENSPREG00000009041	aicda	98	55.238	Poecilia_reticulata
ENSMUSG00000040627	Aicda	100	93.333	ENSPPYG00000004242	AICDA	100	93.367	Pongo_abelii
ENSMUSG00000040627	Aicda	92	89.091	ENSPCAG00000009544	-	54	90.385	Procavia_capensis
ENSMUSG00000040627	Aicda	72	93.023	ENSPCOG00000003380	-	80	91.791	Propithecus_coquereli
ENSMUSG00000040627	Aicda	100	92.424	ENSPVAG00000012185	AICDA	100	92.424	Pteropus_vampyrus
ENSMUSG00000040627	Aicda	100	60.000	ENSPNYG00000000988	aicda	100	60.406	Pundamilia_nyererei
ENSMUSG00000040627	Aicda	100	65.000	ENSPNAG00000019237	aicda	99	61.650	Pygocentrus_nattereri
ENSMUSG00000040627	Aicda	100	97.980	ENSRNOG00000015478	Aicda	100	97.980	Rattus_norvegicus
ENSMUSG00000040627	Aicda	100	95.000	ENSRBIG00000026659	AICDA	100	94.949	Rhinopithecus_bieti
ENSMUSG00000040627	Aicda	100	95.000	ENSRROG00000032866	AICDA	100	94.949	Rhinopithecus_roxellana
ENSMUSG00000040627	Aicda	100	75.253	ENSSBOG00000035758	AICDA	100	75.253	Saimiri_boliviensis_boliviensis
ENSMUSG00000040627	Aicda	100	93.333	ENSSHAG00000008694	AICDA	100	89.899	Sarcophilus_harrisii
ENSMUSG00000040627	Aicda	100	70.000	ENSSFOG00015001695	aicda	98	61.836	Scleropages_formosus
ENSMUSG00000040627	Aicda	100	65.000	ENSSMAG00000012339	aicda	89	57.692	Scophthalmus_maximus
ENSMUSG00000040627	Aicda	100	61.667	ENSSDUG00000009894	aicda	97	59.391	Seriola_dumerili
ENSMUSG00000040627	Aicda	100	61.667	ENSSLDG00000023022	aicda	95	59.694	Seriola_lalandi_dorsalis
ENSMUSG00000040627	Aicda	98	88.136	ENSSPUG00000009022	AICDA	98	84.456	Sphenodon_punctatus
ENSMUSG00000040627	Aicda	100	58.333	ENSSPAG00000021499	aicda	66	55.238	Stegastes_partitus
ENSMUSG00000040627	Aicda	100	95.000	ENSSSCG00000000667	AICDA	100	93.434	Sus_scrofa
ENSMUSG00000040627	Aicda	100	83.333	ENSTGUG00000013115	AICDA	100	80.612	Taeniopygia_guttata
ENSMUSG00000040627	Aicda	100	60.000	ENSTRUG00000007079	aicda	98	57.143	Takifugu_rubripes
ENSMUSG00000040627	Aicda	99	56.190	ENSTNIG00000008118	aicda	98	56.190	Tetraodon_nigroviridis
ENSMUSG00000040627	Aicda	99	63.265	ENSTBEG00000002559	AICDA	100	63.265	Tupaia_belangeri
ENSMUSG00000040627	Aicda	91	92.857	ENSTTRG00000000703	AICDA	100	92.857	Tursiops_truncatus
ENSMUSG00000040627	Aicda	98	94.915	ENSUAMG00000011642	AICDA	98	93.750	Ursus_americanus
ENSMUSG00000040627	Aicda	98	94.915	ENSUMAG00000016540	AICDA	98	93.750	Ursus_maritimus
ENSMUSG00000040627	Aicda	100	91.667	ENSVPAG00000003950	AICDA	100	91.837	Vicugna_pacos
ENSMUSG00000040627	Aicda	100	71.667	ENSXETG00000023905	aicda	98	70.051	Xenopus_tropicalis
ENSMUSG00000040627	Aicda	98	62.712	ENSXCOG00000019386	aicda	90	56.633	Xiphophorus_couchianus
ENSMUSG00000040627	Aicda	100	61.667	ENSXMAG00000011889	aicda	91	58.163	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000178	exosome (RNase complex)	-	ISO	Component
GO:0000932	P-body	21873635.	IBA	Component
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003824	catalytic activity	-	IEA	Function
GO:0004126	cytidine deaminase activity	21873635.	IBA	Function
GO:0004126	cytidine deaminase activity	10373455.	IDA	Function
GO:0004126	cytidine deaminase activity	12692563.	IMP	Function
GO:0004126	cytidine deaminase activity	-	ISO	Function
GO:0005515	protein binding	21186367.21518874.23820005.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	17713479.	IC	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0009972	cytidine deamination	12692563.	IMP	Process
GO:0010529	negative regulation of transposition	21873635.	IBA	Process
GO:0016445	somatic diversification of immunoglobulins	-	ISO	Process
GO:0016446	somatic hypermutation of immunoglobulin genes	-	ISO	Process
GO:0016554	cytidine to uridine editing	21873635.	IBA	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0031625	ubiquitin protein ligase binding	-	ISO	Function
GO:0033262	regulation of nuclear cell cycle DNA replication	-	ISO	Process
GO:0042742	defense response to bacterium	14766966.	IGI	Process
GO:0042742	defense response to bacterium	14766966.	IMP	Process
GO:0042802	identical protein binding	-	ISO	Function
GO:0045190	isotype switching	17713479.21518874.	IMP	Process
GO:0045869	negative regulation of single stranded viral RNA replication via double stranded DNA intermediate	21873635.	IBA	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0051607	defense response to virus	21873635.	IBA	Process
GO:0070383	DNA cytosine deamination	21873635.	IBA	Process
GO:0071222	cellular response to lipopolysaccharide	18762567.	IMP	Process
GO:0080111	DNA demethylation	21873635.	IBA	Process
GO:0080111	DNA demethylation	-	ISO	Process
GO:0090310	negative regulation of methylation-dependent chromatin silencing	-	ISO	Process