EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000040651 (Gene tree)
Gene ID: 218850
Gene Symbol: Fam208a
Alias: 4933409E02Rik|D14Abb1e|MommeD6
Full Name: family with sequence similarity 208%2C member A
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 54722
Position: chr14: 27428834-27483555
Accession: 1921694
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000223688	-	2344	-	-	- (aa)	-	-
ENSMUST00000022450	-	7590	XM_006518820	ENSMUSP00000022450	1498 (aa)	XP_006518883	Q69ZR9
ENSMUST00000225139	-	3038	-	ENSMUSP00000153529	293 (aa)	-	A0A286YDQ5
ENSMUST00000223970	-	4677	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000040651's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000040651's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000040651	Fam208a	99	84.192	ENSG00000163946	TASOR	100	81.143	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000792	heterochromatin	-	ISO	Component
GO:0003682	chromatin binding	-	ISO	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005694	chromosome	-	IEA	Component
GO:0045814	negative regulation of gene expression, epigenetic	-	ISO	Process
GO:0045869	negative regulation of single stranded viral RNA replication via double stranded DNA intermediate	-	ISO	Process
GO:0090309	positive regulation of methylation-dependent chromatin silencing	-	ISO	Process
GO:0097355	protein localization to heterochromatin	-	ISO	Process