EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000040694 (Gene tree)
Gene ID
11811
Gene Symbol
Apobec2
Alias
-
Full Name
apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide 2
Gene Type
protein_coding
Species
Mus_musculus
Status
putative
Strand
Minus strand
Length
13700 bases
Position
chr17:48419231-48432930
Accession
1343178
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000047402APOBEC_NPF08210.111.2e-5011
ENSMUSP00000047402APOBEC_CPF05240.142.8e-2511
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000046549-1420-ENSMUSP00000047402224 (aa)-Q9WV35
ENSMUST00000233707-317--- (aa)--
Gene Model
Click here to download ENSMUSG00000040694's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000040694's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000040694Apobec27734.483ENSMUSG00000040627Aicda8634.483
ENSMUSG00000040694Apobec27733.898ENSMUSG00000009585Apobec39833.721
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000040694Apobec210090.625ENSG00000124701APOBEC210090.625Homo_sapiens
ENSMUSG00000040694Apobec28557.592ENSAPOG00000019390apobec2b6957.592Acanthochromis_polyacanthus
ENSMUSG00000040694Apobec28085.475ENSAMEG00000004467APOBEC27680.729Ailuropoda_melanoleuca
ENSMUSG00000040694Apobec28559.686ENSACIG00000002472APOBEC27759.686Amphilophus_citrinellus
ENSMUSG00000040694Apobec28556.250ENSACIG00000016370apobec2a7256.250Amphilophus_citrinellus
ENSMUSG00000040694Apobec28558.115ENSAOCG00000023355apobec2b6958.115Amphiprion_ocellaris
ENSMUSG00000040694Apobec29754.091ENSAOCG00000003291apobec2a7757.216Amphiprion_ocellaris
ENSMUSG00000040694Apobec29754.338ENSAPEG00000003630apobec2a7757.216Amphiprion_percula
ENSMUSG00000040694Apobec28558.115ENSAPEG00000004591apobec2b6958.115Amphiprion_percula
ENSMUSG00000040694Apobec29655.556ENSATEG00000000956apobec2a9460.920Anabas_testudineus
ENSMUSG00000040694Apobec28557.592ENSATEG00000023043APOBEC26857.592Anabas_testudineus
ENSMUSG00000040694Apobec28478.947ENSAPLG00000002895APOBEC29374.178Anas_platyrhynchos
ENSMUSG00000040694Apobec28569.110ENSACAG00000016506APOBEC29473.184Anolis_carolinensis
ENSMUSG00000040694Apobec210091.071ENSANAG00000026993APOBEC210091.071Aotus_nancymaae
ENSMUSG00000040694Apobec28559.686ENSACLG00000007634APOBEC26959.686Astatotilapia_calliptera
ENSMUSG00000040694Apobec27952.514ENSACLG00000026736-9652.514Astatotilapia_calliptera
ENSMUSG00000040694Apobec29858.904ENSAMXG00000015966apobec2b7160.396Astyanax_mexicanus
ENSMUSG00000040694Apobec29052.913ENSAMXG00000042992apobec2a7754.369Astyanax_mexicanus
ENSMUSG00000040694Apobec210087.946ENSBTAG00000005974APOBEC27287.946Bos_taurus
ENSMUSG00000040694Apobec210091.964ENSCJAG00000004063APOBEC210091.964Callithrix_jacchus
ENSMUSG00000040694Apobec210090.625ENSCAFG00000001575APOBEC210090.625Canis_familiaris
ENSMUSG00000040694Apobec210091.071ENSCAFG00020008306APOBEC210091.071Canis_lupus_dingo
ENSMUSG00000040694Apobec210089.732ENSCHIG00000026348APOBEC210089.732Capra_hircus
ENSMUSG00000040694Apobec29491.905ENSTSYG00000008206APOBEC29391.905Carlito_syrichta
ENSMUSG00000040694Apobec29489.100ENSCAPG00000015084APOBEC29389.100Cavia_aperea
ENSMUSG00000040694Apobec29489.100ENSCPOG00000036103APOBEC29389.100Cavia_porcellus
ENSMUSG00000040694Apobec210091.518ENSCCAG00000033987APOBEC210091.518Cebus_capucinus
ENSMUSG00000040694Apobec210088.839ENSCATG00000010691APOBEC210088.839Cercocebus_atys
ENSMUSG00000040694Apobec210087.719ENSCLAG00000013817APOBEC29389.573Chinchilla_lanigera
ENSMUSG00000040694Apobec210090.625ENSCSAG00000011177APOBEC210090.625Chlorocebus_sabaeus
ENSMUSG00000040694Apobec28092.737ENSCHOG00000008930APOBEC29992.737Choloepus_hoffmanni
ENSMUSG00000040694Apobec28379.144ENSCPBG00000017469APOBEC29575.355Chrysemys_picta_bellii
ENSMUSG00000040694Apobec210090.179ENSCANG00000035072APOBEC210090.179Colobus_angolensis_palliatus
ENSMUSG00000040694Apobec210095.536ENSCGRG00001014983Apobec210095.536Cricetulus_griseus_chok1gshd
ENSMUSG00000040694Apobec210095.536ENSCGRG00000007835Apobec210095.536Cricetulus_griseus_crigri
ENSMUSG00000040694Apobec29655.300ENSCSEG00000020201apobec2a8056.250Cynoglossus_semilaevis
ENSMUSG00000040694Apobec28556.021ENSCSEG00000000690-6956.021Cynoglossus_semilaevis
ENSMUSG00000040694Apobec29258.937ENSCVAG00000012342apobec2b7558.937Cyprinodon_variegatus
ENSMUSG00000040694Apobec28661.658ENSDARG00000018881apobec2a7659.330Danio_rerio
ENSMUSG00000040694Apobec29356.604ENSDARG00000113992apobec2b7756.604Danio_rerio
ENSMUSG00000040694Apobec210065.066ENSDNOG00000033914APOBEC210065.066Dasypus_novemcinctus
ENSMUSG00000040694Apobec210088.646ENSDORG00000006447Apobec29290.521Dipodomys_ordii
ENSMUSG00000040694Apobec29487.678ENSETEG00000000624APOBEC29287.678Echinops_telfairi
ENSMUSG00000040694Apobec28689.583ENSEASG00005002937APOBEC210089.583Equus_asinus_asinus
ENSMUSG00000040694Apobec210090.625ENSECAG00000006576APOBEC210090.625Equus_caballus
ENSMUSG00000040694Apobec210086.161ENSEEUG00000006046APOBEC210086.161Erinaceus_europaeus
ENSMUSG00000040694Apobec28655.959ENSELUG00000003736apobec2a6954.455Esox_lucius
ENSMUSG00000040694Apobec210088.839ENSFCAG00000004108APOBEC210088.839Felis_catus
ENSMUSG00000040694Apobec29958.850ENSFALG00000003910APOBEC29460.377Ficedula_albicollis
ENSMUSG00000040694Apobec210088.889ENSFDAG00000006015APOBEC210088.889Fukomys_damarensis
ENSMUSG00000040694Apobec28562.304ENSFHEG00000005492apobec2b7962.304Fundulus_heteroclitus
ENSMUSG00000040694Apobec27764.740ENSGMOG00000007028apobec2a9664.740Gadus_morhua
ENSMUSG00000040694Apobec28556.545ENSGMOG00000006819apobec2b7656.545Gadus_morhua
ENSMUSG00000040694Apobec28578.010ENSGALG00000003226APOBEC29573.364Gallus_gallus
ENSMUSG00000040694Apobec28561.780ENSGAFG00000007634apobec2b6061.780Gambusia_affinis
ENSMUSG00000040694Apobec28657.216ENSGACG00000011671apobec2a10057.216Gasterosteus_aculeatus
ENSMUSG00000040694Apobec28656.995ENSGACG00000009663apobec2b8356.995Gasterosteus_aculeatus
ENSMUSG00000040694Apobec28378.610ENSGAGG00000010347APOBEC29574.528Gopherus_agassizii
ENSMUSG00000040694Apobec29491.905ENSGGOG00000001099APOBEC29191.905Gorilla_gorilla
ENSMUSG00000040694Apobec29754.795ENSHBUG00000015890apobec2a7558.031Haplochromis_burtoni
ENSMUSG00000040694Apobec28559.162ENSHBUG00000005993apobec2b6959.162Haplochromis_burtoni
ENSMUSG00000040694Apobec29488.152ENSHGLG00000017169APOBEC29388.152Heterocephalus_glaber_female
ENSMUSG00000040694Apobec29488.152ENSHGLG00100019442APOBEC29388.152Heterocephalus_glaber_male
ENSMUSG00000040694Apobec29952.232ENSHCOG00000020319apobec2a7857.000Hippocampus_comes
ENSMUSG00000040694Apobec28659.067ENSHCOG00000002712APOBEC27159.067Hippocampus_comes
ENSMUSG00000040694Apobec29654.545ENSIPUG00000017355apobec2a5955.660Ictalurus_punctatus
ENSMUSG00000040694Apobec28959.000ENSIPUG00000013784Apobec27459.000Ictalurus_punctatus
ENSMUSG00000040694Apobec210090.179ENSSTOG00000023643APOBEC210090.179Ictidomys_tridecemlineatus
ENSMUSG00000040694Apobec210088.393ENSJJAG00000009733Apobec210088.393Jaculus_jaculus
ENSMUSG00000040694Apobec28558.947ENSKMAG00000020631apobec2b6958.947Kryptolebias_marmoratus
ENSMUSG00000040694Apobec29852.511ENSLBEG00000009422-6657.592Labrus_bergylta
ENSMUSG00000040694Apobec29853.846ENSLBEG00000025214apobec2a8256.650Labrus_bergylta
ENSMUSG00000040694Apobec28966.000ENSLACG00000015985APOBEC28566.000Latimeria_chalumnae
ENSMUSG00000040694Apobec29060.199ENSLOCG00000012415apobec2b7160.199Lepisosteus_oculatus
ENSMUSG00000040694Apobec29590.566ENSLAFG00000016563APOBEC210090.179Loxodonta_africana
ENSMUSG00000040694Apobec210090.625ENSMFAG00000044645APOBEC210090.625Macaca_fascicularis
ENSMUSG00000040694Apobec210090.625ENSMMUG00000021171APOBEC210090.625Macaca_mulatta
ENSMUSG00000040694Apobec210090.625ENSMNEG00000045497APOBEC210090.625Macaca_nemestrina
ENSMUSG00000040694Apobec210090.625ENSMLEG00000028328APOBEC210090.625Mandrillus_leucophaeus
ENSMUSG00000040694Apobec28559.162ENSMAMG00000007926APOBEC26859.162Mastacembelus_armatus
ENSMUSG00000040694Apobec29956.054ENSMAMG00000023685apobec2a7460.309Mastacembelus_armatus
ENSMUSG00000040694Apobec28559.162ENSMZEG00005027159APOBEC26959.162Maylandia_zebra
ENSMUSG00000040694Apobec29754.338ENSMZEG00005005240-9156.364Maylandia_zebra
ENSMUSG00000040694Apobec28578.010ENSMGAG00000010173APOBEC29377.222Meleagris_gallopavo
ENSMUSG00000040694Apobec210094.196ENSMAUG00000011016Apobec210094.196Mesocricetus_auratus
ENSMUSG00000040694Apobec210091.518ENSMICG00000043339APOBEC210091.518Microcebus_murinus
ENSMUSG00000040694Apobec210095.089ENSMOCG00000001904Apobec210095.089Microtus_ochrogaster
ENSMUSG00000040694Apobec25245.690ENSMMOG00000009531-6546.018Mola_mola
ENSMUSG00000040694Apobec29354.327ENSMMOG00000008681apobec2b7654.327Mola_mola
ENSMUSG00000040694Apobec29983.408ENSMODG00000013090APOBEC29585.646Monodelphis_domestica
ENSMUSG00000040694Apobec28557.592ENSMALG00000013779APOBEC27257.592Monopterus_albus
ENSMUSG00000040694Apobec28659.278ENSMALG00000020523apobec2a7659.278Monopterus_albus
ENSMUSG00000040694Apobec210099.107MGP_CAROLIEiJ_G0021727Apobec210099.107Mus_caroli
ENSMUSG00000040694Apobec210099.554MGP_PahariEiJ_G0020716Apobec210099.554Mus_pahari
ENSMUSG00000040694Apobec29489.573ENSMPUG00000013691APOBEC29090.000Mustela_putorius_furo
ENSMUSG00000040694Apobec29689.252ENSMLUG00000011327APOBEC29189.524Myotis_lucifugus
ENSMUSG00000040694Apobec210094.196ENSNGAG00000013717Apobec210094.196Nannospalax_galili
ENSMUSG00000040694Apobec28658.031ENSNBRG00000021776apobec2a7558.031Neolamprologus_brichardi
ENSMUSG00000040694Apobec28559.162ENSNBRG00000018806apobec2b6159.162Neolamprologus_brichardi
ENSMUSG00000040694Apobec210090.625ENSNLEG00000005057APOBEC210090.625Nomascus_leucogenys
ENSMUSG00000040694Apobec29984.305ENSMEUG00000011623APOBEC29586.603Notamacropus_eugenii
ENSMUSG00000040694Apobec210087.719ENSOPRG00000014808APOBEC210089.035Ochotona_princeps
ENSMUSG00000040694Apobec29489.100ENSODEG00000016183APOBEC29289.100Octodon_degus
ENSMUSG00000040694Apobec28559.686ENSONIG00000012289apobec2b6959.686Oreochromis_niloticus
ENSMUSG00000040694Apobec29755.708ENSONIG00000004644-7559.585Oreochromis_niloticus
ENSMUSG00000040694Apobec27584.024ENSOANG00000000824APOBEC29880.110Ornithorhynchus_anatinus
ENSMUSG00000040694Apobec210089.868ENSOCUG00000028008APOBEC210089.868Oryctolagus_cuniculus
ENSMUSG00000040694Apobec29453.333ENSORLG00000010752apobec2a8454.680Oryzias_latipes
ENSMUSG00000040694Apobec29853.182ENSORLG00000022372APOBEC26957.592Oryzias_latipes
ENSMUSG00000040694Apobec29453.333ENSORLG00020004153apobec2a8454.680Oryzias_latipes_hni
ENSMUSG00000040694Apobec29853.636ENSORLG00020006164APOBEC26958.115Oryzias_latipes_hni
ENSMUSG00000040694Apobec29854.091ENSORLG00015022089-6958.639Oryzias_latipes_hsok
ENSMUSG00000040694Apobec29453.333ENSORLG00015021781apobec2a8454.680Oryzias_latipes_hsok
ENSMUSG00000040694Apobec28558.639ENSOMEG00000015449APOBEC27658.639Oryzias_melastigma
ENSMUSG00000040694Apobec29155.665ENSOMEG00000001311apobec2a8355.665Oryzias_melastigma
ENSMUSG00000040694Apobec210092.411ENSOGAG00000002632APOBEC210092.411Otolemur_garnettii
ENSMUSG00000040694Apobec210089.286ENSOARG00000000820APOBEC210089.286Ovis_aries
ENSMUSG00000040694Apobec29491.429ENSPPAG00000035598APOBEC29191.429Pan_paniscus
ENSMUSG00000040694Apobec210088.839ENSPPRG00000008530APOBEC210088.839Panthera_pardus
ENSMUSG00000040694Apobec29488.626ENSPTIG00000011084APOBEC29489.048Panthera_tigris_altaica
ENSMUSG00000040694Apobec29491.905ENSPTRG00000029679APOBEC29191.905Pan_troglodytes
ENSMUSG00000040694Apobec210090.625ENSPANG00000007121APOBEC210090.625Papio_anubis
ENSMUSG00000040694Apobec29954.936ENSPKIG00000005395apobec2a7958.500Paramormyrops_kingsleyae
ENSMUSG00000040694Apobec28662.176ENSPKIG00000004741apobec2b6862.176Paramormyrops_kingsleyae
ENSMUSG00000040694Apobec28378.610ENSPSIG00000013480APOBEC29770.852Pelodiscus_sinensis
ENSMUSG00000040694Apobec29956.306ENSPMGG00000004044apobec2a8158.373Periophthalmus_magnuspinnatus
ENSMUSG00000040694Apobec28557.068ENSPMGG00000002686APOBEC25557.068Periophthalmus_magnuspinnatus
ENSMUSG00000040694Apobec29495.714ENSPEMG00000005724Apobec210095.536Peromyscus_maniculatus_bairdii
ENSMUSG00000040694Apobec28561.780ENSPFOG00000001216apobec2b6961.780Poecilia_formosa
ENSMUSG00000040694Apobec28561.780ENSPLAG00000002074apobec2b7661.780Poecilia_latipinna
ENSMUSG00000040694Apobec28561.780ENSPMEG00000017537apobec2b6961.780Poecilia_mexicana
ENSMUSG00000040694Apobec28560.209ENSPREG00000020060apobec2b6060.209Poecilia_reticulata
ENSMUSG00000040694Apobec210089.732ENSPPYG00000016586APOBEC210089.732Pongo_abelii
ENSMUSG00000040694Apobec28590.576ENSPCAG00000011433APOBEC210090.576Procavia_capensis
ENSMUSG00000040694Apobec210092.857ENSPCOG00000026935APOBEC210092.857Propithecus_coquereli
ENSMUSG00000040694Apobec210088.839ENSPVAG00000008316APOBEC210088.839Pteropus_vampyrus
ENSMUSG00000040694Apobec28559.162ENSPNYG00000016747apobec2b6959.162Pundamilia_nyererei
ENSMUSG00000040694Apobec28961.500ENSPNAG00000013666apobec2b7559.434Pygocentrus_nattereri
ENSMUSG00000040694Apobec28656.477ENSPNAG00000010382apobec2a7156.477Pygocentrus_nattereri
ENSMUSG00000040694Apobec210098.661ENSRNOG00000012303Apobec210098.661Rattus_norvegicus
ENSMUSG00000040694Apobec210090.625ENSRBIG00000044756APOBEC210090.625Rhinopithecus_bieti
ENSMUSG00000040694Apobec210090.179ENSRROG00000030082APOBEC210090.179Rhinopithecus_roxellana
ENSMUSG00000040694Apobec210091.071ENSSBOG00000028496APOBEC210091.071Saimiri_boliviensis_boliviensis
ENSMUSG00000040694Apobec29384.211ENSSHAG00000017771APOBEC29484.211Sarcophilus_harrisii
ENSMUSG00000040694Apobec27749.711ENSSFOG00015005437-7149.711Scleropages_formosus
ENSMUSG00000040694Apobec29858.182ENSSFOG00015022920apobec26863.212Scleropages_formosus
ENSMUSG00000040694Apobec28559.162ENSSMAG00000005110APOBEC27355.714Scophthalmus_maximus
ENSMUSG00000040694Apobec29656.221ENSSMAG00000001011apobec2a5659.794Scophthalmus_maximus
ENSMUSG00000040694Apobec29952.703ENSSDUG00000014543apobec2b6957.513Seriola_dumerili
ENSMUSG00000040694Apobec29456.604ENSSDUG00000007013apobec2a8156.938Seriola_dumerili
ENSMUSG00000040694Apobec29952.703ENSSLDG00000003321apobec2b6957.513Seriola_lalandi_dorsalis
ENSMUSG00000040694Apobec29656.279ENSSLDG00000020199apobec2a8157.416Seriola_lalandi_dorsalis
ENSMUSG00000040694Apobec28965.700ENSSPUG00000010839APOBEC29967.150Sphenodon_punctatus
ENSMUSG00000040694Apobec28558.639ENSSPAG00000005253apobec2b6958.639Stegastes_partitus
ENSMUSG00000040694Apobec29954.464ENSSPAG00000016299-7757.216Stegastes_partitus
ENSMUSG00000040694Apobec210089.286ENSSSCG00000036018APOBEC210089.286Sus_scrofa
ENSMUSG00000040694Apobec29968.142ENSTGUG00000018533APOBEC29570.283Taeniopygia_guttata
ENSMUSG00000040694Apobec28559.162ENSTRUG00000012839apobec2b7059.162Takifugu_rubripes
ENSMUSG00000040694Apobec29454.028ENSTRUG00000009123apobec2a7656.995Takifugu_rubripes
ENSMUSG00000040694Apobec28558.115ENSTNIG00000015038apobec2b7058.115Tetraodon_nigroviridis
ENSMUSG00000040694Apobec210091.964ENSTBEG00000003553APOBEC210091.964Tupaia_belangeri
ENSMUSG00000040694Apobec210086.161ENSTTRG00000013392APOBEC210086.161Tursiops_truncatus
ENSMUSG00000040694Apobec210082.018ENSUAMG00000027667APOBEC29284.762Ursus_americanus
ENSMUSG00000040694Apobec25983.088ENSUMAG00000012252APOBEC27788.136Ursus_maritimus
ENSMUSG00000040694Apobec25594.937ENSVPAG00000008024APOBEC25594.937Vicugna_pacos
ENSMUSG00000040694Apobec29490.476ENSVVUG00000026617APOBEC210090.625Vulpes_vulpes
ENSMUSG00000040694Apobec210048.739ENSXETG00000008007apobec29251.598Xenopus_tropicalis
ENSMUSG00000040694Apobec29059.901ENSXCOG00000007398apobec2b7759.901Xiphophorus_couchianus
ENSMUSG00000040694Apobec28561.257ENSXMAG00000008134apobec2b6861.257Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003723RNA binding21873635.IBAFunction
GO:0003824catalytic activity-IEAFunction
GO:0004126cytidine deaminase activity21873635.IBAFunction
GO:0004126cytidine deaminase activity10403781.IDAFunction
GO:0004126cytidine deaminase activity10403781.ISOFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005737cytoplasm21873635.IBAComponent
GO:0006397mRNA processing-IEAProcess
GO:0016554cytidine to uridine editing21873635.IBAProcess
GO:0016554cytidine to uridine editing10403781.IDAProcess
GO:0016554cytidine to uridine editing10403781.ISOProcess
GO:0016556mRNA modification8626621.IMPProcess
GO:0016787hydrolase activity-IEAFunction
GO:0042802identical protein binding-ISOFunction
GO:0046872metal ion binding-IEAFunction
GO:0080111DNA demethylation21873635.IBAProcess
GO:0080111DNA demethylation-ISOProcess

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