EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000040720 (Gene tree)
Gene ID: 66185
Gene Symbol: Virma
Alias: 1110037F02Rik
Full Name: vir like m6A methyltransferase associated
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 64727
Position: chr4: 11485958-11550684
Accession: 1913435
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000108307	-	6571	-	ENSMUSP00000103943	1861 (aa)	-	E9PZY8
ENSMUST00000055372	-	3954	-	ENSMUSP00000063188	1139 (aa)	-	A2AIV2
ENSMUST00000059914	-	6506	XM_006538160	ENSMUSP00000058078	1811 (aa)	XP_006538223	A2AIV2

Gene Model

Click here to download ENSMUSG00000040720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000040720's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000040720	Virma	100	95.695	ENSG00000164944	VIRMA	100	95.695	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	29547716.	IDA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	29547716.	IDA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0007275	multicellular organism development	-	IEA	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0016604	nuclear body	-	ISO	Component
GO:0016607	nuclear speck	-	ISO	Component
GO:0036396	RNA N6-methyladenosine methyltransferase complex	29547716.	IDA	Component
GO:0036396	RNA N6-methyladenosine methyltransferase complex	-	ISO	Component
GO:0036396	RNA N6-methyladenosine methyltransferase complex	-	ISO	Component
GO:0080009	mRNA methylation	-	ISO	Process
GO:0110104	mRNA alternative polyadenylation	-	ISO	Process