EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000040728 (Gene tree)
Gene ID: 207920
Gene Symbol: Esrp1
Alias: 2210008M09Rik|Rbm35a
Full Name: epithelial splicing regulatory protein 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 54851
Position: chr4: 11331933-11386783
Accession: 1917326
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000108310	-	2781	XM_006537715	ENSMUSP00000103946	677 (aa)	XP_006537778	Q3US41
ENSMUST00000108311	-	3864	XM_006537717	ENSMUSP00000103947	681 (aa)	XP_006537780	F8WGU3
ENSMUST00000108313	-	3696	XM_006537718	ENSMUSP00000103949	604 (aa)	XP_006537781	Q3US41
ENSMUST00000043781	-	3743	XM_006537716	ENSMUSP00000037921	659 (aa)	XP_006537779	Z4YJI3
ENSMUST00000127399	-	391	-	-	- (aa)	-	-
ENSMUST00000147342	-	1892	-	ENSMUSP00000121117	467 (aa)	-	Z4YMV4
ENSMUST00000155519	-	3562	XM_006537721	ENSMUSP00000119598	500 (aa)	XP_006537784	Z4YMQ5

Gene Model

Click here to download ENSMUSG00000040728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000040728's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000040728	Esrp1	100	97.269	ENSG00000104413	ESRP1	100	97.269	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000380	alternative mRNA splicing, via spliceosome	26371508.	IGI	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0003729	mRNA binding	-	ISO	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0016604	nuclear body	-	ISO	Component
GO:0042669	regulation of inner ear auditory receptor cell fate specification	29107558.	IMP	Process
GO:0043484	regulation of RNA splicing	29107558.	IMP	Process
GO:0043484	regulation of RNA splicing	-	ISO	Process
GO:0050679	positive regulation of epithelial cell proliferation	26371508.	IGI	Process
GO:0060441	epithelial tube branching involved in lung morphogenesis	26371508.	IGI	Process
GO:0060445	branching involved in salivary gland morphogenesis	26371508.	IGI	Process