EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000040782 (Gene tree)
Gene ID: 26374
Gene Symbol: Cop1
Alias: Cop1|Rfwd2
Full Name: COP1%2C E3 ubiquitin ligase
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 115321
Position: chr1: 159232320-159347640
Accession: 1347046
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000195554	-	545	-	ENSMUSP00000141561	60 (aa)	-	A0A0A6YWI1
ENSMUST00000195800	-	753	-	ENSMUSP00000141941	159 (aa)	-	A0A0A6YXD2
ENSMUST00000194049	-	655	-	-	- (aa)	-	-
ENSMUST00000192597	-	4961	-	-	- (aa)	-	-
ENSMUST00000194798	-	473	-	-	- (aa)	-	-
ENSMUST00000194713	-	6999	-	-	- (aa)	-	-
ENSMUST00000192841	-	776	-	-	- (aa)	-	-
ENSMUST00000076894	-	5116	XM_006496859	ENSMUSP00000076160	733 (aa)	XP_006496923	Q9R1A8
ENSMUST00000195044	-	745	-	ENSMUSP00000141200	202 (aa)	-	A0A0A6YVP2
ENSMUST00000192215	-	1040	-	ENSMUSP00000141285	346 (aa)	-	A0A0A6YVV7
ENSMUST00000193776	-	392	-	-	- (aa)	-	-
ENSMUST00000192762	-	680	-	ENSMUSP00000142031	227 (aa)	-	A0A0A6YXK6
ENSMUST00000192044	-	464	-	ENSMUSP00000141490	155 (aa)	-	A0A0A6YWC5

Gene Model

Click here to download ENSMUSG00000040782's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04115	p53 signaling pathway	KEGG
mmu04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000040782's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000139	Golgi membrane	-	ISO	Component
GO:0005515	protein binding	16794074.17805301.	IPI	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0010212	response to ionizing radiation	-	ISO	Process
GO:0016567	protein ubiquitination	-	ISO	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0031464	Cul4A-RING E3 ubiquitin ligase complex	-	ISO	Component
GO:0032436	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	-	ISO	Process
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0061630	ubiquitin protein ligase activity	-	ISO	Function