EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000040785 (Gene tree)
Gene ID: 22129
Gene Symbol: Ttc3
Alias: 2610202A04Rik|D16Ium21|D16Ium21e|TPRD
Full Name: tetratricopeptide repeat domain 3
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 98726
Position: chr16: 94370618-94469343
Accession: 1276539
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000141856	-	711	-	ENSMUSP00000117369	128 (aa)	-	D3Z502
ENSMUST00000141176	-	627	-	ENSMUSP00000114483	209 (aa)	-	F6XYB0
ENSMUST00000231915	-	5833	-	ENSMUSP00000155956	325 (aa)	-	UPI000DE7C52C
ENSMUST00000130960	-	416	-	-	- (aa)	-	-
ENSMUST00000154243	-	632	-	ENSMUSP00000122439	106 (aa)	-	E9QAH3
ENSMUST00000141192	-	760	-	ENSMUSP00000117530	84 (aa)	-	F6ZS17
ENSMUST00000151770	-	3630	-	ENSMUSP00000121349	1179 (aa)	-	D6RD03
ENSMUST00000155692	-	3771	-	ENSMUSP00000122724	1197 (aa)	-	D6RFU5
ENSMUST00000149753	-	613	-	-	- (aa)	-	-
ENSMUST00000153062	-	672	-	ENSMUSP00000115389	87 (aa)	-	Q05BF2
ENSMUST00000232395	-	8007	XM_011246113	ENSMUSP00000156023	1979 (aa)	XP_011244415	UPI000154C120
ENSMUST00000117648	-	7415	XM_006522984	ENSMUSP00000112801	1979 (aa)	XP_006523047	G5E8T2
ENSMUST00000119131	-	3781	-	ENSMUSP00000113311	300 (aa)	-	G5E8U3
ENSMUST00000150097	-	654	-	ENSMUSP00000119035	125 (aa)	-	D3Z330
ENSMUST00000145432	-	2973	-	ENSMUSP00000121501	87 (aa)	-	Q05BF2
ENSMUST00000139607	-	4212	-	-	- (aa)	-	-
ENSMUST00000149885	-	363	-	ENSMUSP00000122006	58 (aa)	-	D3Z3E5
ENSMUST00000129536	-	766	-	-	- (aa)	-	-
ENSMUST00000151192	-	410	-	-	- (aa)	-	-
ENSMUST00000127667	-	332	-	ENSMUSP00000122425	111 (aa)	-	F7DAQ7
ENSMUST00000150346	-	2180	-	ENSMUSP00000122726	622 (aa)	-	D3Z485
ENSMUST00000127911	-	332	-	-	- (aa)	-	-
ENSMUST00000122895	-	3579	-	ENSMUSP00000123037	1162 (aa)	-	D6RDD2
ENSMUST00000143145	-	3614	-	ENSMUSP00000122650	87 (aa)	-	Q05BF2
ENSMUST00000147352	-	3540	-	ENSMUSP00000116097	1135 (aa)	-	D6RHT6
ENSMUST00000232660	-	8298	XM_006522987	ENSMUSP00000156151	1979 (aa)	XP_006523050	UPI000154C120
ENSMUST00000232368	-	1408	-	ENSMUSP00000156020	250 (aa)	-	UPI000DE7F154
ENSMUST00000154196	-	926	-	ENSMUSP00000156057	43 (aa)	-	UPI000DE7C175
ENSMUST00000231569	-	6373	XM_006522994	ENSMUSP00000156137	1624 (aa)	XP_006523057	UPI000DE7EFF1
ENSMUST00000153988	-	1607	-	ENSMUSP00000118763	469 (aa)	-	D3YZ03
ENSMUST00000145883	-	599	-	ENSMUSP00000123442	78 (aa)	-	D3YZA6
ENSMUST00000147046	-	1519	-	ENSMUSP00000119265	382 (aa)	-	D3Z2K0
ENSMUST00000152117	-	2572	-	ENSMUSP00000116896	776 (aa)	-	A0A0R4J1T2
ENSMUST00000139513	-	671	-	ENSMUSP00000117881	85 (aa)	-	D6REF1
ENSMUST00000231850	-	741	-	ENSMUSP00000156316	16 (aa)	-	UPI000DE7D485

Gene Model

Click here to download ENSMUSG00000040785's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000040785's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004842	ubiquitin-protein transferase activity	21873635.	IBA	Function
GO:0004842	ubiquitin-protein transferase activity	-	ISO	Function
GO:0005515	protein binding	17488780.	IPI	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005773	vacuole	17488780.	IDA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006511	ubiquitin-dependent protein catabolic process	21873635.	IBA	Process
GO:0006511	ubiquitin-dependent protein catabolic process	-	ISO	Process
GO:0010771	negative regulation of cell morphogenesis involved in differentiation	17488780.	IDA	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0045665	negative regulation of neuron differentiation	17488780.	IDA	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0070936	protein K48-linked ubiquitination	-	ISO	Process