EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000040945 (Gene tree)
Gene ID: 108911
Gene Symbol: Rcc2
Alias: 2610510H01Rik|2610529N02Rik|Td60
Full Name: regulator of chromosome condensation 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 22680
Position: chr4: 140700541-140723220
Accession: 1919784
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000129838	-	347	-	-	- (aa)	-	-
ENSMUST00000071169	-	3999	-	ENSMUSP00000071163	520 (aa)	-	Q8BK67
ENSMUST00000138682	-	430	-	-	- (aa)	-	-
ENSMUST00000038893	-	3767	XM_006538471	ENSMUSP00000038144	520 (aa)	XP_006538534	Q8BK67
ENSMUST00000138808	-	699	-	ENSMUSP00000117448	170 (aa)	-	A2AWQ2

Gene Model

Click here to download ENSMUSG00000040945's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000040945's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000040945	Rcc2	83	48.148	FBgn0031769	CG9135	84	49.165	Drosophila_melanogaster
ENSMUSG00000040945	Rcc2	100	95.977	ENSG00000179051	RCC2	100	95.977	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000775	chromosome, centromeric region	-	IEA	Component
GO:0005085	guanyl-nucleotide exchange factor activity	-	IEA	Function
GO:0005634	nucleus	25074804.	IDA	Component
GO:0005694	chromosome	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005874	microtubule	-	IEA	Component
GO:0005886	plasma membrane	25074804.	IDA	Component
GO:0007049	cell cycle	-	IEA	Process
GO:0007229	integrin-mediated signaling pathway	-	ISO	Process
GO:0008017	microtubule binding	-	ISO	Function
GO:0010762	regulation of fibroblast migration	25074804.	IMP	Process
GO:0010971	positive regulation of G2/M transition of mitotic cell cycle	-	ISO	Process
GO:0016020	membrane	-	ISO	Component
GO:0019901	protein kinase binding	-	ISO	Function
GO:0019904	protein domain specific binding	-	ISO	Function
GO:0030334	regulation of cell migration	19738201.	IMP	Process
GO:0030496	midbody	-	ISO	Component
GO:0031267	small GTPase binding	-	ISO	Function
GO:0031901	early endosome membrane	25074804.	IDA	Component
GO:0034260	negative regulation of GTPase activity	19738201.25074804.	IMP	Process
GO:0034260	negative regulation of GTPase activity	-	ISO	Process
GO:0034506	chromosome, centromeric core domain	-	ISO	Component
GO:0045184	establishment of protein localization	25074804.	IGI	Process
GO:0048041	focal adhesion assembly	-	ISO	Process
GO:0048365	Rac GTPase binding	25074804.	IPI	Function
GO:0048365	Rac GTPase binding	-	ISO	Function
GO:0051301	cell division	-	IEA	Process
GO:0051895	negative regulation of focal adhesion assembly	19738201.	IMP	Process
GO:0051987	positive regulation of attachment of spindle microtubules to kinetochore	-	ISO	Process
GO:0072356	chromosome passenger complex localization to kinetochore	-	ISO	Process
GO:0090630	activation of GTPase activity	25074804.	IGI	Process
GO:1900025	negative regulation of substrate adhesion-dependent cell spreading	19738201.	IMP	Process
GO:1900027	regulation of ruffle assembly	25074804.	IGI	Process
GO:1900027	regulation of ruffle assembly	25074804.	IMP	Process
GO:1990023	mitotic spindle midzone	-	ISO	Component