EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000040990 (Gene tree)
Gene ID: 58194
Gene Symbol: Sh3kbp1
Alias: 1200007H22Rik|1700125L08Rik|5830464D22Rik|IN85|Ruk|Seta
Full Name: SH3-domain kinase binding protein 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 350798
Position: chrX: 159627272-159978069
Accession: 1889583
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000112447	-	4245	-	-	- (aa)	-	-
ENSMUST00000112451	-	3914	XM_006528932	ENSMUSP00000108070	427 (aa)	XP_006528995	Q8R550
ENSMUST00000141354	-	2681	-	ENSMUSP00000114262	447 (aa)	-	E9Q0C1
ENSMUST00000112456	-	7317	XM_017318585	ENSMUSP00000108075	665 (aa)	XP_017174074	Q8R550
ENSMUST00000150433	-	2745	-	-	- (aa)	-	-
ENSMUST00000152426	-	783	XM_011247851	ENSMUSP00000117618	209 (aa)	XP_011246153	B0R0Y8
ENSMUST00000080394	-	2980	XM_006528927	ENSMUSP00000079257	628 (aa)	XP_006528990	Q8R550
ENSMUST00000130987	-	666	-	-	- (aa)	-	-
ENSMUST00000112453	-	2515	-	ENSMUSP00000108072	464 (aa)	-	Q8R550
ENSMUST00000123433	-	799	-	ENSMUSP00000114799	208 (aa)	-	B1AZ85
ENSMUST00000128185	-	3847	-	-	- (aa)	-	-
ENSMUST00000142426	-	1986	-	-	- (aa)	-	-
ENSMUST00000073094	-	2280	XM_006528924	ENSMUSP00000072840	709 (aa)	XP_006528987	Q8R550
ENSMUST00000134062	-	799	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000040990's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000040990's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005515	protein binding	11152963.20551902.21830225.	IPI	Function
GO:0005737	cytoplasm	-	ISO	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005911	cell-cell junction	23793062.	IDA	Component
GO:0006897	endocytosis	-	IEA	Process
GO:0006915	apoptotic process	-	IEA	Process
GO:0007010	cytoskeleton organization	-	ISO	Process
GO:0008360	regulation of cell shape	-	ISO	Process
GO:0016020	membrane	-	IEA	Component
GO:0016477	cell migration	-	ISO	Process
GO:0017124	SH3 domain binding	-	IEA	Function
GO:0030054	cell junction	-	IEA	Component
GO:0030139	endocytic vesicle	21830225.	IDA	Component
GO:0031410	cytoplasmic vesicle	-	IEA	Component
GO:0031625	ubiquitin protein ligase binding	-	ISO	Function
GO:0043005	neuron projection	-	IEA	Component
GO:0045202	synapse	-	IEA	Component