EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000041130 (Gene tree)
Gene ID: 213753
Gene Symbol: Zfp598
Alias: -
Full Name: zinc finger protein 598
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 12330
Position: chr17: 24669687-24682016
Accession: 2670965
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000234956	-	3352	XM_006524000	ENSMUSP00000157172	908 (aa)	XP_006524063	UPI000018CE2E
ENSMUST00000234988	-	3285	-	-	- (aa)	-	-
ENSMUST00000047179	-	3283	XM_006523999	ENSMUSP00000038367	905 (aa)	XP_006524062	Q80YR4

Gene Model

Click here to download ENSMUSG00000041130's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000041130's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000041130	Zfp598	50	48.519	FBgn0035024	CG11414	51	48.519	Drosophila_melanogaster
ENSMUSG00000041130	Zfp598	94	79.395	ENSG00000167962	ZNF598	100	80.442	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0006417	regulation of translation	-	IEA	Process
GO:0006513	protein monoubiquitination	-	ISO	Process
GO:0016567	protein ubiquitination	-	ISO	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0043022	ribosome binding	-	ISO	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0061630	ubiquitin protein ligase activity	-	ISO	Function
GO:0072344	rescue of stalled ribosome	-	ISO	Process