EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000041199 (Gene tree)
Gene ID: 106707
Gene Symbol: Rpusd1
Alias: 2310051D06Rik
Full Name: RNA pseudouridylate synthase domain containing 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 3706 bases
Position: chr17:25727751-25731456
Accession: 1919186
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000043825	PseudoU_synth_2	PF00849.22	1e-24	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000047273	-	1703	XM_006523414	ENSMUSP00000043825	306 (aa)	XP_006523477	Q8VCZ8

Gene Model

Click here to download ENSMUSG00000041199's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000041199's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000041199	Rpusd1	100	81.410	ENSG00000007376	RPUSD1	100	87.500	Homo_sapiens
ENSMUSG00000041199	Rpusd1	98	57.616	ENSAPOG00000022221	rpusd1	98	57.616	Acanthochromis_polyacanthus
ENSMUSG00000041199	Rpusd1	100	85.294	ENSAMEG00000007461	RPUSD1	100	85.294	Ailuropoda_melanoleuca
ENSMUSG00000041199	Rpusd1	98	58.170	ENSACIG00000015863	rpusd1	98	58.170	Amphilophus_citrinellus
ENSMUSG00000041199	Rpusd1	98	57.377	ENSAOCG00000021975	rpusd1	95	57.377	Amphiprion_ocellaris
ENSMUSG00000041199	Rpusd1	98	57.705	ENSAPEG00000001316	rpusd1	95	57.705	Amphiprion_percula
ENSMUSG00000041199	Rpusd1	83	64.822	ENSATEG00000002984	rpusd1	98	58.361	Anabas_testudineus
ENSMUSG00000041199	Rpusd1	78	59.756	ENSAPLG00000012316	RPUSD1	99	59.350	Anas_platyrhynchos
ENSMUSG00000041199	Rpusd1	99	68.977	ENSACAG00000008953	RPUSD1	100	68.977	Anolis_carolinensis
ENSMUSG00000041199	Rpusd1	100	82.692	ENSANAG00000024709	RPUSD1	100	83.333	Aotus_nancymaae
ENSMUSG00000041199	Rpusd1	98	58.632	ENSACLG00000013692	rpusd1	98	57.655	Astatotilapia_calliptera
ENSMUSG00000041199	Rpusd1	99	59.736	ENSAMXG00000019802	rpusd1	100	59.736	Astyanax_mexicanus
ENSMUSG00000041199	Rpusd1	100	85.065	ENSBTAG00000000179	RPUSD1	100	86.039	Bos_taurus
ENSMUSG00000041199	Rpusd1	100	82.692	ENSCJAG00000012253	RPUSD1	100	83.013	Callithrix_jacchus
ENSMUSG00000041199	Rpusd1	100	85.294	ENSCAFG00000019614	RPUSD1	100	85.621	Canis_familiaris
ENSMUSG00000041199	Rpusd1	100	85.294	ENSCAFG00020008891	RPUSD1	100	85.621	Canis_lupus_dingo
ENSMUSG00000041199	Rpusd1	100	85.065	ENSCHIG00000012872	RPUSD1	100	86.039	Capra_hircus
ENSMUSG00000041199	Rpusd1	100	83.660	ENSTSYG00000036934	RPUSD1	100	82.848	Carlito_syrichta
ENSMUSG00000041199	Rpusd1	100	89.216	ENSCAPG00000014219	RPUSD1	100	89.216	Cavia_aperea
ENSMUSG00000041199	Rpusd1	100	89.216	ENSCPOG00000034604	RPUSD1	100	89.216	Cavia_porcellus
ENSMUSG00000041199	Rpusd1	100	83.013	ENSCCAG00000034385	RPUSD1	100	83.333	Cebus_capucinus
ENSMUSG00000041199	Rpusd1	100	83.013	ENSCATG00000042983	RPUSD1	100	83.333	Cercocebus_atys
ENSMUSG00000041199	Rpusd1	100	87.255	ENSCLAG00000013966	RPUSD1	100	87.255	Chinchilla_lanigera
ENSMUSG00000041199	Rpusd1	100	83.013	ENSCSAG00000012121	RPUSD1	100	83.333	Chlorocebus_sabaeus
ENSMUSG00000041199	Rpusd1	99	66.118	ENSCPBG00000021101	RPUSD1	99	66.118	Chrysemys_picta_bellii
ENSMUSG00000041199	Rpusd1	92	85.409	ENSCANG00000028576	RPUSD1	97	86.447	Colobus_angolensis_palliatus
ENSMUSG00000041199	Rpusd1	100	92.810	ENSCGRG00001014253	Rpusd1	100	92.810	Cricetulus_griseus_chok1gshd
ENSMUSG00000041199	Rpusd1	100	92.810	ENSCGRG00000017995	Rpusd1	100	92.810	Cricetulus_griseus_crigri
ENSMUSG00000041199	Rpusd1	99	56.536	ENSCSEG00000018512	rpusd1	100	56.209	Cynoglossus_semilaevis
ENSMUSG00000041199	Rpusd1	98	58.333	ENSCVAG00000022746	rpusd1	98	58.333	Cyprinodon_variegatus
ENSMUSG00000041199	Rpusd1	99	62.706	ENSDARG00000060192	rpusd1	100	62.092	Danio_rerio
ENSMUSG00000041199	Rpusd1	100	81.090	ENSDNOG00000003721	RPUSD1	100	80.317	Dasypus_novemcinctus
ENSMUSG00000041199	Rpusd1	100	88.889	ENSDORG00000026656	Rpusd1	100	88.562	Dipodomys_ordii
ENSMUSG00000041199	Rpusd1	99	44.785	ENSEBUG00000008767	rpusd1	94	45.597	Eptatretus_burgeri
ENSMUSG00000041199	Rpusd1	100	82.911	ENSEASG00005018421	RPUSD1	76	83.228	Equus_asinus_asinus
ENSMUSG00000041199	Rpusd1	83	60.236	ENSELUG00000014307	rpusd1	88	52.366	Esox_lucius
ENSMUSG00000041199	Rpusd1	100	83.333	ENSFCAG00000010359	RPUSD1	100	83.007	Felis_catus
ENSMUSG00000041199	Rpusd1	99	67.987	ENSFALG00000003211	RPUSD1	100	67.327	Ficedula_albicollis
ENSMUSG00000041199	Rpusd1	100	88.235	ENSFDAG00000013398	RPUSD1	100	88.235	Fukomys_damarensis
ENSMUSG00000041199	Rpusd1	98	57.426	ENSFHEG00000004736	rpusd1	98	57.426	Fundulus_heteroclitus
ENSMUSG00000041199	Rpusd1	83	62.846	ENSGMOG00000010756	rpusd1	98	55.263	Gadus_morhua
ENSMUSG00000041199	Rpusd1	99	66.230	ENSGALG00000005315	RPUSD1	100	65.902	Gallus_gallus
ENSMUSG00000041199	Rpusd1	98	59.000	ENSGAFG00000009886	rpusd1	98	59.000	Gambusia_affinis
ENSMUSG00000041199	Rpusd1	82	64.143	ENSGACG00000014276	rpusd1	97	57.756	Gasterosteus_aculeatus
ENSMUSG00000041199	Rpusd1	99	66.118	ENSGAGG00000004181	RPUSD1	99	66.118	Gopherus_agassizii
ENSMUSG00000041199	Rpusd1	100	81.090	ENSGGOG00000013997	RPUSD1	100	81.410	Gorilla_gorilla
ENSMUSG00000041199	Rpusd1	98	58.306	ENSHBUG00000023728	rpusd1	98	57.329	Haplochromis_burtoni
ENSMUSG00000041199	Rpusd1	100	87.908	ENSHGLG00000002595	RPUSD1	100	87.908	Heterocephalus_glaber_female
ENSMUSG00000041199	Rpusd1	100	87.908	ENSHGLG00100014303	RPUSD1	100	87.908	Heterocephalus_glaber_male
ENSMUSG00000041199	Rpusd1	98	57.895	ENSHCOG00000002390	rpusd1	99	57.426	Hippocampus_comes
ENSMUSG00000041199	Rpusd1	99	61.842	ENSIPUG00000001570	rpusd1	99	61.842	Ictalurus_punctatus
ENSMUSG00000041199	Rpusd1	100	89.542	ENSSTOG00000004276	RPUSD1	100	89.542	Ictidomys_tridecemlineatus
ENSMUSG00000041199	Rpusd1	100	91.830	ENSJJAG00000015696	Rpusd1	100	91.830	Jaculus_jaculus
ENSMUSG00000041199	Rpusd1	98	57.426	ENSKMAG00000017287	rpusd1	98	57.333	Kryptolebias_marmoratus
ENSMUSG00000041199	Rpusd1	98	57.377	ENSLBEG00000022502	rpusd1	98	57.705	Labrus_bergylta
ENSMUSG00000041199	Rpusd1	98	57.377	ENSLBEG00000013354	RPUSD1	98	57.705	Labrus_bergylta
ENSMUSG00000041199	Rpusd1	99	62.583	ENSLACG00000008869	RPUSD1	99	62.583	Latimeria_chalumnae
ENSMUSG00000041199	Rpusd1	71	74.074	ENSLOCG00000005682	rpusd1	99	74.074	Lepisosteus_oculatus
ENSMUSG00000041199	Rpusd1	100	83.660	ENSLAFG00000002115	RPUSD1	100	83.660	Loxodonta_africana
ENSMUSG00000041199	Rpusd1	100	83.333	ENSMFAG00000003961	RPUSD1	100	83.654	Macaca_fascicularis
ENSMUSG00000041199	Rpusd1	100	83.333	ENSMMUG00000000842	RPUSD1	100	83.654	Macaca_mulatta
ENSMUSG00000041199	Rpusd1	100	83.333	ENSMNEG00000042712	RPUSD1	100	83.654	Macaca_nemestrina
ENSMUSG00000041199	Rpusd1	100	83.333	ENSMLEG00000030591	RPUSD1	100	83.654	Mandrillus_leucophaeus
ENSMUSG00000041199	Rpusd1	83	64.822	ENSMAMG00000004735	rpusd1	98	58.170	Mastacembelus_armatus
ENSMUSG00000041199	Rpusd1	98	58.632	ENSMZEG00005003214	rpusd1	98	57.655	Maylandia_zebra
ENSMUSG00000041199	Rpusd1	97	65.667	ENSMGAG00000005447	RPUSD1	99	65.667	Meleagris_gallopavo
ENSMUSG00000041199	Rpusd1	86	86.466	ENSMAUG00000019998	Rpusd1	100	86.466	Mesocricetus_auratus
ENSMUSG00000041199	Rpusd1	100	85.342	ENSMICG00000017561	RPUSD1	100	84.076	Microcebus_murinus
ENSMUSG00000041199	Rpusd1	100	95.752	ENSMOCG00000014082	Rpusd1	100	95.752	Microtus_ochrogaster
ENSMUSG00000041199	Rpusd1	78	67.083	ENSMMOG00000012569	rpusd1	99	58.000	Mola_mola
ENSMUSG00000041199	Rpusd1	100	72.258	ENSMODG00000016882	RPUSD1	100	71.613	Monodelphis_domestica
ENSMUSG00000041199	Rpusd1	98	57.516	ENSMALG00000017818	rpusd1	98	58.170	Monopterus_albus
ENSMUSG00000041199	Rpusd1	100	99.020	MGP_CAROLIEiJ_G0021244	Rpusd1	100	99.020	Mus_caroli
ENSMUSG00000041199	Rpusd1	100	97.403	MGP_PahariEiJ_G0023562	Rpusd1	100	97.403	Mus_pahari
ENSMUSG00000041199	Rpusd1	100	100.000	MGP_SPRETEiJ_G0022155	Rpusd1	100	100.000	Mus_spretus
ENSMUSG00000041199	Rpusd1	100	83.007	ENSMPUG00000015897	RPUSD1	100	84.314	Mustela_putorius_furo
ENSMUSG00000041199	Rpusd1	100	85.256	ENSMLUG00000001089	RPUSD1	100	85.897	Myotis_lucifugus
ENSMUSG00000041199	Rpusd1	100	93.137	ENSNGAG00000003595	Rpusd1	100	93.137	Nannospalax_galili
ENSMUSG00000041199	Rpusd1	98	58.528	ENSNBRG00000006457	rpusd1	98	58.528	Neolamprologus_brichardi
ENSMUSG00000041199	Rpusd1	55	77.714	ENSNLEG00000008424	-	100	77.714	Nomascus_leucogenys
ENSMUSG00000041199	Rpusd1	100	70.740	ENSMEUG00000016049	RPUSD1	100	71.242	Notamacropus_eugenii
ENSMUSG00000041199	Rpusd1	99	77.961	ENSOPRG00000008340	RPUSD1	99	77.961	Ochotona_princeps
ENSMUSG00000041199	Rpusd1	100	84.967	ENSODEG00000016945	RPUSD1	100	84.967	Octodon_degus
ENSMUSG00000041199	Rpusd1	98	57.980	ENSONIG00000015672	rpusd1	99	57.003	Oreochromis_niloticus
ENSMUSG00000041199	Rpusd1	99	58.278	ENSORLG00000013009	rpusd1	99	58.278	Oryzias_latipes
ENSMUSG00000041199	Rpusd1	99	57.947	ENSORLG00020010382	rpusd1	99	57.947	Oryzias_latipes_hni
ENSMUSG00000041199	Rpusd1	99	57.285	ENSORLG00015021354	rpusd1	99	57.285	Oryzias_latipes_hsok
ENSMUSG00000041199	Rpusd1	98	57.860	ENSOMEG00000021426	rpusd1	98	57.860	Oryzias_melastigma
ENSMUSG00000041199	Rpusd1	100	87.821	ENSOGAG00000003795	RPUSD1	100	87.179	Otolemur_garnettii
ENSMUSG00000041199	Rpusd1	100	84.740	ENSOARG00000014254	RPUSD1	100	85.714	Ovis_aries
ENSMUSG00000041199	Rpusd1	100	81.090	ENSPPAG00000034797	RPUSD1	100	81.410	Pan_paniscus
ENSMUSG00000041199	Rpusd1	100	83.007	ENSPPRG00000012389	RPUSD1	100	82.201	Panthera_pardus
ENSMUSG00000041199	Rpusd1	100	83.007	ENSPTIG00000008545	RPUSD1	92	82.201	Panthera_tigris_altaica
ENSMUSG00000041199	Rpusd1	100	81.090	ENSPTRG00000007565	RPUSD1	100	81.410	Pan_troglodytes
ENSMUSG00000041199	Rpusd1	100	82.692	ENSPANG00000024401	RPUSD1	100	83.013	Papio_anubis
ENSMUSG00000041199	Rpusd1	99	59.871	ENSPKIG00000018890	rpusd1	91	59.871	Paramormyrops_kingsleyae
ENSMUSG00000041199	Rpusd1	99	67.869	ENSPSIG00000013945	RPUSD1	100	67.541	Pelodiscus_sinensis
ENSMUSG00000041199	Rpusd1	98	58.528	ENSPMGG00000014950	rpusd1	98	58.528	Periophthalmus_magnuspinnatus
ENSMUSG00000041199	Rpusd1	100	96.078	ENSPEMG00000000497	Rpusd1	100	96.078	Peromyscus_maniculatus_bairdii
ENSMUSG00000041199	Rpusd1	98	50.654	ENSPMAG00000001563	rpusd1	82	57.143	Petromyzon_marinus
ENSMUSG00000041199	Rpusd1	100	70.927	ENSPCIG00000021216	-	94	72.222	Phascolarctos_cinereus
ENSMUSG00000041199	Rpusd1	98	58.746	ENSPFOG00000007946	rpusd1	98	58.194	Poecilia_formosa
ENSMUSG00000041199	Rpusd1	98	58.746	ENSPLAG00000011925	rpusd1	98	58.194	Poecilia_latipinna
ENSMUSG00000041199	Rpusd1	98	58.416	ENSPMEG00000002910	rpusd1	98	57.860	Poecilia_mexicana
ENSMUSG00000041199	Rpusd1	98	59.667	ENSPREG00000019851	rpusd1	98	59.667	Poecilia_reticulata
ENSMUSG00000041199	Rpusd1	100	67.647	ENSPCAG00000002258	RPUSD1	100	67.647	Procavia_capensis
ENSMUSG00000041199	Rpusd1	100	86.218	ENSPCOG00000022582	RPUSD1	100	86.538	Propithecus_coquereli
ENSMUSG00000041199	Rpusd1	100	83.013	ENSPVAG00000013104	RPUSD1	100	83.333	Pteropus_vampyrus
ENSMUSG00000041199	Rpusd1	98	58.306	ENSPNYG00000024076	rpusd1	98	57.860	Pundamilia_nyererei
ENSMUSG00000041199	Rpusd1	99	58.416	ENSPNAG00000013806	rpusd1	100	58.746	Pygocentrus_nattereri
ENSMUSG00000041199	Rpusd1	100	97.386	ENSRNOG00000023639	Rpusd1	100	97.386	Rattus_norvegicus
ENSMUSG00000041199	Rpusd1	100	83.013	ENSRBIG00000030238	RPUSD1	100	83.333	Rhinopithecus_bieti
ENSMUSG00000041199	Rpusd1	100	83.013	ENSRROG00000036663	RPUSD1	100	83.333	Rhinopithecus_roxellana
ENSMUSG00000041199	Rpusd1	100	83.007	ENSSBOG00000033063	RPUSD1	100	83.660	Saimiri_boliviensis_boliviensis
ENSMUSG00000041199	Rpusd1	100	69.968	ENSSHAG00000013500	RPUSD1	100	71.242	Sarcophilus_harrisii
ENSMUSG00000041199	Rpusd1	99	62.252	ENSSFOG00015014394	rpusd1	99	62.252	Scleropages_formosus
ENSMUSG00000041199	Rpusd1	98	58.033	ENSSMAG00000008045	rpusd1	91	57.705	Scophthalmus_maximus
ENSMUSG00000041199	Rpusd1	83	66.403	ENSSDUG00000001829	rpusd1	95	59.672	Seriola_dumerili
ENSMUSG00000041199	Rpusd1	83	66.403	ENSSLDG00000020853	rpusd1	95	59.672	Seriola_lalandi_dorsalis
ENSMUSG00000041199	Rpusd1	55	88.024	ENSSARG00000011187	-	100	88.024	Sorex_araneus
ENSMUSG00000041199	Rpusd1	63	55.155	ENSSPUG00000005119	-	100	55.155	Sphenodon_punctatus
ENSMUSG00000041199	Rpusd1	98	58.689	ENSSPAG00000012708	rpusd1	98	58.689	Stegastes_partitus
ENSMUSG00000041199	Rpusd1	100	83.974	ENSSSCG00000008000	RPUSD1	98	87.795	Sus_scrofa
ENSMUSG00000041199	Rpusd1	83	75.686	ENSTGUG00000015375	RPUSD1	100	75.686	Taeniopygia_guttata
ENSMUSG00000041199	Rpusd1	98	57.190	ENSTRUG00000003041	rpusd1	98	57.190	Takifugu_rubripes
ENSMUSG00000041199	Rpusd1	98	54.333	ENSTNIG00000002660	rpusd1	99	54.333	Tetraodon_nigroviridis
ENSMUSG00000041199	Rpusd1	100	85.256	ENSTTRG00000010167	RPUSD1	100	84.295	Tursiops_truncatus
ENSMUSG00000041199	Rpusd1	100	85.294	ENSUAMG00000012736	RPUSD1	100	85.621	Ursus_americanus
ENSMUSG00000041199	Rpusd1	100	85.294	ENSUMAG00000021174	RPUSD1	100	85.621	Ursus_maritimus
ENSMUSG00000041199	Rpusd1	100	84.365	ENSVVUG00000012357	RPUSD1	100	84.314	Vulpes_vulpes
ENSMUSG00000041199	Rpusd1	100	61.111	ENSXETG00000007184	rpusd1	100	60.191	Xenopus_tropicalis
ENSMUSG00000041199	Rpusd1	98	58.333	ENSXCOG00000017930	rpusd1	98	58.333	Xiphophorus_couchianus
ENSMUSG00000041199	Rpusd1	98	58.667	ENSXMAG00000024084	rpusd1	98	58.667	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001522	pseudouridine synthesis	-	IEA	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0009451	RNA modification	-	IEA	Process
GO:0009982	pseudouridine synthase activity	-	IEA	Function