EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000041477 (Gene tree)
Gene ID: 319618
Gene Symbol: Dcp1b
Alias: B930050E02Rik
Full Name: decapping mRNA 1B
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 46364 bases
Position: chr6:119175253-119221616
Accession: 2442404
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000073568	DCP1	PF06058.13	4.1e-42	1	1
ENSMUSP00000108397	DCP1	PF06058.13	4.6e-42	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000073909	-	1748	-	ENSMUSP00000073568	545 (aa)	-	Q3U564
ENSMUST00000136437	-	698	-	-	- (aa)	-	-
ENSMUST00000127059	-	2048	-	-	- (aa)	-	-
ENSMUST00000112777	-	3313	XM_006506238	ENSMUSP00000108397	578 (aa)	XP_006506301	B9EIX0
ENSMUST00000149651	-	4209	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000041477's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000041477's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000041477	Dcp1b	100	63.533	ENSG00000151065	DCP1B	82	92.784	Homo_sapiens
ENSMUSG00000041477	Dcp1b	98	76.087	ENSAMEG00000004141	DCP1B	89	73.469	Ailuropoda_melanoleuca
ENSMUSG00000041477	Dcp1b	51	50.836	ENSAOCG00000024199	dcp1b	97	37.555	Amphiprion_ocellaris
ENSMUSG00000041477	Dcp1b	51	51.000	ENSAPEG00000004530	dcp1b	97	37.647	Amphiprion_percula
ENSMUSG00000041477	Dcp1b	59	45.407	ENSATEG00000015045	dcp1b	52	45.405	Anabas_testudineus
ENSMUSG00000041477	Dcp1b	99	55.772	ENSAPLG00000004762	DCP1B	98	55.611	Anas_platyrhynchos
ENSMUSG00000041477	Dcp1b	96	53.048	ENSACAG00000005541	DCP1B	91	52.718	Anolis_carolinensis
ENSMUSG00000041477	Dcp1b	100	71.698	ENSANAG00000025391	DCP1B	91	71.698	Aotus_nancymaae
ENSMUSG00000041477	Dcp1b	56	52.000	ENSACLG00000026164	dcp1b	96	39.213	Astatotilapia_calliptera
ENSMUSG00000041477	Dcp1b	61	51.576	ENSAMXG00000007683	dcp1b	96	43.502	Astyanax_mexicanus
ENSMUSG00000041477	Dcp1b	97	80.000	ENSBTAG00000030285	DCP1B	87	80.000	Bos_taurus
ENSMUSG00000041477	Dcp1b	100	71.698	ENSCJAG00000039529	DCP1B	89	71.698	Callithrix_jacchus
ENSMUSG00000041477	Dcp1b	100	63.592	ENSCAFG00000015993	DCP1B	99	62.951	Canis_familiaris
ENSMUSG00000041477	Dcp1b	100	63.592	ENSCAFG00020012014	DCP1B	99	62.951	Canis_lupus_dingo
ENSMUSG00000041477	Dcp1b	98	58.685	ENSCHIG00000014193	DCP1B	98	58.725	Capra_hircus
ENSMUSG00000041477	Dcp1b	98	62.768	ENSTSYG00000008455	DCP1B	98	62.109	Carlito_syrichta
ENSMUSG00000041477	Dcp1b	91	56.400	ENSCAPG00000012066	DCP1B	100	56.600	Cavia_aperea
ENSMUSG00000041477	Dcp1b	99	60.201	ENSCPOG00000005279	DCP1B	98	60.396	Cavia_porcellus
ENSMUSG00000041477	Dcp1b	100	73.585	ENSCCAG00000026870	DCP1B	91	73.585	Cebus_capucinus
ENSMUSG00000041477	Dcp1b	100	73.585	ENSCATG00000031397	DCP1B	90	73.585	Cercocebus_atys
ENSMUSG00000041477	Dcp1b	100	75.472	ENSCSAG00000011349	DCP1B	89	75.472	Chlorocebus_sabaeus
ENSMUSG00000041477	Dcp1b	89	58.564	ENSCHOG00000003452	DCP1B	99	59.853	Choloepus_hoffmanni
ENSMUSG00000041477	Dcp1b	98	57.679	ENSCPBG00000027442	DCP1B	98	57.216	Chrysemys_picta_bellii
ENSMUSG00000041477	Dcp1b	100	71.698	ENSCANG00000036019	DCP1B	90	71.698	Colobus_angolensis_palliatus
ENSMUSG00000041477	Dcp1b	99	86.942	ENSCGRG00001016549	Dcp1b	99	86.254	Cricetulus_griseus_chok1gshd
ENSMUSG00000041477	Dcp1b	91	86.278	ENSCGRG00000013122	Dcp1b	99	85.526	Cricetulus_griseus_crigri
ENSMUSG00000041477	Dcp1b	56	45.983	ENSCVAG00000015026	dcp1b	97	36.735	Cyprinodon_variegatus
ENSMUSG00000041477	Dcp1b	99	40.179	ENSDARG00000045484	dcp1b	96	40.367	Danio_rerio
ENSMUSG00000041477	Dcp1b	100	62.993	ENSDNOG00000003156	DCP1B	99	64.000	Dasypus_novemcinctus
ENSMUSG00000041477	Dcp1b	88	91.429	ENSETEG00000005873	DCP1B	87	92.784	Echinops_telfairi
ENSMUSG00000041477	Dcp1b	100	63.533	ENSEASG00005008434	DCP1B	89	62.885	Equus_asinus_asinus
ENSMUSG00000041477	Dcp1b	100	63.371	ENSECAG00000018293	DCP1B	99	62.562	Equus_caballus
ENSMUSG00000041477	Dcp1b	91	50.814	ENSEEUG00000007906	DCP1B	99	50.633	Erinaceus_europaeus
ENSMUSG00000041477	Dcp1b	59	51.261	ENSELUG00000011344	dcp1b	61	51.445	Esox_lucius
ENSMUSG00000041477	Dcp1b	100	75.472	ENSFCAG00000004819	DCP1B	90	75.472	Felis_catus
ENSMUSG00000041477	Dcp1b	85	71.429	ENSFALG00000003240	DCP1B	89	63.265	Ficedula_albicollis
ENSMUSG00000041477	Dcp1b	99	62.338	ENSFDAG00000018093	DCP1B	98	62.336	Fukomys_damarensis
ENSMUSG00000041477	Dcp1b	58	46.218	ENSFHEG00000019846	dcp1b	97	36.842	Fundulus_heteroclitus
ENSMUSG00000041477	Dcp1b	98	55.298	ENSGALG00000050288	DCP1B	98	55.354	Gallus_gallus
ENSMUSG00000041477	Dcp1b	84	44.865	ENSGAFG00000016200	dcp1b	98	37.234	Gambusia_affinis
ENSMUSG00000041477	Dcp1b	79	52.395	ENSGACG00000019692	dcp1b	97	39.005	Gasterosteus_aculeatus
ENSMUSG00000041477	Dcp1b	99	66.667	ENSGAGG00000014114	DCP1B	98	55.848	Gopherus_agassizii
ENSMUSG00000041477	Dcp1b	100	63.107	ENSGGOG00000010659	DCP1B	82	92.784	Gorilla_gorilla
ENSMUSG00000041477	Dcp1b	57	50.153	ENSHBUG00000006101	dcp1b	96	39.213	Haplochromis_burtoni
ENSMUSG00000041477	Dcp1b	100	64.506	ENSHGLG00000019233	DCP1B	98	64.696	Heterocephalus_glaber_female
ENSMUSG00000041477	Dcp1b	100	64.506	ENSHGLG00100007645	DCP1B	98	64.696	Heterocephalus_glaber_male
ENSMUSG00000041477	Dcp1b	76	50.613	ENSHCOG00000014509	dcp1b	97	40.608	Hippocampus_comes
ENSMUSG00000041477	Dcp1b	100	64.355	ENSSTOG00000027287	DCP1B	99	64.706	Ictidomys_tridecemlineatus
ENSMUSG00000041477	Dcp1b	81	51.712	ENSKMAG00000014961	dcp1b	74	77.778	Kryptolebias_marmoratus
ENSMUSG00000041477	Dcp1b	98	46.895	ENSLACG00000017357	DCP1B	98	46.254	Latimeria_chalumnae
ENSMUSG00000041477	Dcp1b	97	47.667	ENSLOCG00000016629	dcp1b	96	46.844	Lepisosteus_oculatus
ENSMUSG00000041477	Dcp1b	100	73.585	ENSMFAG00000028687	DCP1B	90	73.585	Macaca_fascicularis
ENSMUSG00000041477	Dcp1b	100	73.585	ENSMMUG00000010992	DCP1B	74	92.381	Macaca_mulatta
ENSMUSG00000041477	Dcp1b	100	73.585	ENSMNEG00000045219	DCP1B	90	73.585	Macaca_nemestrina
ENSMUSG00000041477	Dcp1b	100	71.698	ENSMLEG00000036414	DCP1B	90	71.698	Mandrillus_leucophaeus
ENSMUSG00000041477	Dcp1b	56	52.000	ENSMZEG00005007893	dcp1b	63	51.852	Maylandia_zebra
ENSMUSG00000041477	Dcp1b	98	51.316	ENSMGAG00000013437	DCP1B	98	51.227	Meleagris_gallopavo
ENSMUSG00000041477	Dcp1b	99	83.219	ENSMAUG00000000763	Dcp1b	99	83.219	Mesocricetus_auratus
ENSMUSG00000041477	Dcp1b	100	63.531	ENSMICG00000005702	DCP1B	99	63.861	Microcebus_murinus
ENSMUSG00000041477	Dcp1b	99	83.904	ENSMOCG00000016799	Dcp1b	99	84.075	Microtus_ochrogaster
ENSMUSG00000041477	Dcp1b	100	58.671	ENSMODG00000018424	DCP1B	98	57.800	Monodelphis_domestica
ENSMUSG00000041477	Dcp1b	99	97.396	MGP_CAROLIEiJ_G0028789	Dcp1b	99	97.396	Mus_caroli
ENSMUSG00000041477	Dcp1b	99	93.997	MGP_PahariEiJ_G0022544	Dcp1b	99	93.997	Mus_pahari
ENSMUSG00000041477	Dcp1b	100	98.791	MGP_SPRETEiJ_G0029821	Dcp1b	99	98.791	Mus_spretus
ENSMUSG00000041477	Dcp1b	100	62.399	ENSMPUG00000018069	DCP1B	99	61.741	Mustela_putorius_furo
ENSMUSG00000041477	Dcp1b	91	59.541	ENSMLUG00000002252	DCP1B	99	61.837	Myotis_lucifugus
ENSMUSG00000041477	Dcp1b	100	77.226	ENSNGAG00000022519	Dcp1b	98	77.257	Nannospalax_galili
ENSMUSG00000041477	Dcp1b	56	51.385	ENSNBRG00000004185	dcp1b	87	80.220	Neolamprologus_brichardi
ENSMUSG00000041477	Dcp1b	100	62.399	ENSNLEG00000002698	DCP1B	88	92.381	Nomascus_leucogenys
ENSMUSG00000041477	Dcp1b	91	58.939	ENSMEUG00000003431	DCP1B	81	57.884	Notamacropus_eugenii
ENSMUSG00000041477	Dcp1b	99	53.496	ENSOPRG00000003721	DCP1B	98	52.796	Ochotona_princeps
ENSMUSG00000041477	Dcp1b	99	72.549	ENSOCUG00000011593	DCP1B	90	72.549	Oryctolagus_cuniculus
ENSMUSG00000041477	Dcp1b	58	46.739	ENSORLG00000014000	dcp1b	54	46.537	Oryzias_latipes
ENSMUSG00000041477	Dcp1b	57	46.814	ENSORLG00020016483	dcp1b	54	46.260	Oryzias_latipes_hni
ENSMUSG00000041477	Dcp1b	57	46.814	ENSORLG00015015461	dcp1b	75	79.592	Oryzias_latipes_hsok
ENSMUSG00000041477	Dcp1b	58	46.761	ENSOMEG00000009287	dcp1b	96	37.072	Oryzias_melastigma
ENSMUSG00000041477	Dcp1b	100	63.696	ENSOGAG00000031515	DCP1B	91	71.698	Otolemur_garnettii
ENSMUSG00000041477	Dcp1b	98	56.155	ENSOARG00000012960	DCP1B	98	56.053	Ovis_aries
ENSMUSG00000041477	Dcp1b	100	62.903	ENSPPAG00000031510	DCP1B	88	92.381	Pan_paniscus
ENSMUSG00000041477	Dcp1b	100	75.472	ENSPPRG00000023318	DCP1B	90	75.472	Panthera_pardus
ENSMUSG00000041477	Dcp1b	100	75.472	ENSPTIG00000021851	DCP1B	90	75.472	Panthera_tigris_altaica
ENSMUSG00000041477	Dcp1b	100	62.742	ENSPTRG00000004525	DCP1B	88	92.381	Pan_troglodytes
ENSMUSG00000041477	Dcp1b	100	73.585	ENSPANG00000008311	DCP1B	90	73.585	Papio_anubis
ENSMUSG00000041477	Dcp1b	56	55.389	ENSPKIG00000000520	dcp1b	96	43.707	Paramormyrops_kingsleyae
ENSMUSG00000041477	Dcp1b	98	54.876	ENSPSIG00000009160	DCP1B	98	54.605	Pelodiscus_sinensis
ENSMUSG00000041477	Dcp1b	99	85.935	ENSPEMG00000019470	Dcp1b	98	85.540	Peromyscus_maniculatus_bairdii
ENSMUSG00000041477	Dcp1b	100	59.643	ENSPCIG00000019743	DCP1B	98	58.785	Phascolarctos_cinereus
ENSMUSG00000041477	Dcp1b	60	48.000	ENSPFOG00000005090	dcp1b	55	48.529	Poecilia_formosa
ENSMUSG00000041477	Dcp1b	58	47.191	ENSPLAG00000005883	dcp1b	52	46.705	Poecilia_latipinna
ENSMUSG00000041477	Dcp1b	58	47.740	ENSPREG00000004280	dcp1b	97	39.308	Poecilia_reticulata
ENSMUSG00000041477	Dcp1b	87	58.379	ENSPPYG00000004145	DCP1B	90	71.698	Pongo_abelii
ENSMUSG00000041477	Dcp1b	91	90.476	ENSPCOG00000026128	DCP1B	89	75.472	Propithecus_coquereli
ENSMUSG00000041477	Dcp1b	100	62.136	ENSPVAG00000001978	DCP1B	99	62.233	Pteropus_vampyrus
ENSMUSG00000041477	Dcp1b	57	48.148	ENSPNYG00000020418	dcp1b	96	38.520	Pundamilia_nyererei
ENSMUSG00000041477	Dcp1b	64	44.086	ENSPNAG00000003792	dcp1b	90	39.010	Pygocentrus_nattereri
ENSMUSG00000041477	Dcp1b	99	92.573	ENSRNOG00000007340	Dcp1b	99	92.573	Rattus_norvegicus
ENSMUSG00000041477	Dcp1b	100	73.585	ENSRBIG00000032794	DCP1B	90	73.585	Rhinopithecus_bieti
ENSMUSG00000041477	Dcp1b	100	73.585	ENSRROG00000041000	DCP1B	90	73.585	Rhinopithecus_roxellana
ENSMUSG00000041477	Dcp1b	100	73.585	ENSSBOG00000033086	DCP1B	91	73.585	Saimiri_boliviensis_boliviensis
ENSMUSG00000041477	Dcp1b	89	53.971	ENSSHAG00000012569	DCP1B	99	54.152	Sarcophilus_harrisii
ENSMUSG00000041477	Dcp1b	76	54.142	ENSSFOG00015023556	dcp1b	96	42.571	Scleropages_formosus
ENSMUSG00000041477	Dcp1b	59	49.854	ENSSLDG00000008782	dcp1b	83	81.443	Seriola_lalandi_dorsalis
ENSMUSG00000041477	Dcp1b	98	55.518	ENSSSCG00000023976	-	84	91.837	Sus_scrofa
ENSMUSG00000041477	Dcp1b	97	65.957	ENSTGUG00000012575	DCP1B	90	65.957	Taeniopygia_guttata
ENSMUSG00000041477	Dcp1b	65	58.108	ENSTNIG00000007579	dcp1b	96	38.160	Tetraodon_nigroviridis
ENSMUSG00000041477	Dcp1b	86	76.087	ENSUMAG00000011668	DCP1B	89	73.469	Ursus_maritimus
ENSMUSG00000041477	Dcp1b	98	63.907	ENSVVUG00000020529	DCP1B	99	63.443	Vulpes_vulpes
ENSMUSG00000041477	Dcp1b	98	51.082	ENSXETG00000000899	dcp1b	96	51.100	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	-	IEA	Process
GO:0000290	deadenylation-dependent decapping of nuclear-transcribed mRNA	21873635.	IBA	Process
GO:0000932	P-body	21873635.	IBA	Component
GO:0000932	P-body	24101522.	IDA	Component
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0008047	enzyme activator activity	-	IEA	Function
GO:0016787	hydrolase activity	-	IEA	Function
GO:0031087	deadenylation-independent decapping of nuclear-transcribed mRNA	21873635.	IBA	Process
GO:0043085	positive regulation of catalytic activity	-	IEA	Process
GO:0043231	intracellular membrane-bounded organelle	-	ISO	Component