EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000041632 (Gene tree)
Gene ID: 218506
Gene Symbol: Mrps27
Alias: 2610028H14Rik
Full Name: mitochondrial ribosomal protein S27
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 70777 bases
Position: chr13:99344786-99415562
Accession: 1919064
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000062326	MRP-S27	PF10037.9	5.5e-156	1	1
ENSMUSP00000156296	MRP-S27	PF10037.9	1.6e-102	1	2
ENSMUSP00000156296	MRP-S27	PF10037.9	1.6e-102	2	2

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000225973	-	493	-	-	- (aa)	-	-
ENSMUST00000224660	-	883	-	ENSMUSP00000156296	289 (aa)	-	UPI000DE7C0EE
ENSMUST00000052249	-	1849	XM_006517602	ENSMUSP00000062326	415 (aa)	XP_006517665	Q8BK72

Gene Model

Click here to download ENSMUSG00000041632's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000041632's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000041632	Mrps27	98	77.284	ENSG00000113048	MRPS27	100	78.000	Homo_sapiens
ENSMUSG00000041632	Mrps27	100	54.671	ENSAPOG00000013985	mrps27	98	54.087	Acanthochromis_polyacanthus
ENSMUSG00000041632	Mrps27	79	77.439	ENSAMEG00000007215	MRPS27	100	77.439	Ailuropoda_melanoleuca
ENSMUSG00000041632	Mrps27	92	58.491	ENSACIG00000004470	mrps27	99	55.980	Amphilophus_citrinellus
ENSMUSG00000041632	Mrps27	100	53.633	ENSAOCG00000011222	mrps27	95	52.038	Amphiprion_ocellaris
ENSMUSG00000041632	Mrps27	100	53.979	ENSAPEG00000006821	mrps27	99	52.278	Amphiprion_percula
ENSMUSG00000041632	Mrps27	92	57.678	ENSATEG00000018107	mrps27	91	55.243	Anabas_testudineus
ENSMUSG00000041632	Mrps27	99	65.942	ENSAPLG00000010577	MRPS27	99	65.942	Anas_platyrhynchos
ENSMUSG00000041632	Mrps27	100	63.309	ENSACAG00000009787	MRPS27	100	63.309	Anolis_carolinensis
ENSMUSG00000041632	Mrps27	99	75.243	ENSANAG00000019419	MRPS27	99	75.243	Aotus_nancymaae
ENSMUSG00000041632	Mrps27	100	54.671	ENSACLG00000013665	mrps27	98	53.976	Astatotilapia_calliptera
ENSMUSG00000041632	Mrps27	100	50.685	ENSAMXG00000006286	mrps27	99	52.745	Astyanax_mexicanus
ENSMUSG00000041632	Mrps27	98	77.586	ENSBTAG00000001962	MRPS27	100	73.317	Bos_taurus
ENSMUSG00000041632	Mrps27	100	77.349	ENSCJAG00000016356	MRPS27	100	77.349	Callithrix_jacchus
ENSMUSG00000041632	Mrps27	98	75.355	ENSCAFG00000007967	MRPS27	100	74.942	Canis_familiaris
ENSMUSG00000041632	Mrps27	98	79.064	ENSCAFG00020019151	MRPS27	85	78.554	Canis_lupus_dingo
ENSMUSG00000041632	Mrps27	98	78.818	ENSCHIG00000024940	MRPS27	100	78.313	Capra_hircus
ENSMUSG00000041632	Mrps27	100	78.072	ENSTSYG00000000559	MRPS27	100	78.072	Carlito_syrichta
ENSMUSG00000041632	Mrps27	72	82.143	ENSCAPG00000012282	-	99	82.143	Cavia_aperea
ENSMUSG00000041632	Mrps27	98	80.049	ENSCPOG00000040481	MRPS27	100	79.518	Cavia_porcellus
ENSMUSG00000041632	Mrps27	100	77.590	ENSCCAG00000030550	MRPS27	100	77.590	Cebus_capucinus
ENSMUSG00000041632	Mrps27	100	77.831	ENSCATG00000034419	MRPS27	100	78.273	Cercocebus_atys
ENSMUSG00000041632	Mrps27	100	77.108	ENSCLAG00000000933	MRPS27	100	77.108	Chinchilla_lanigera
ENSMUSG00000041632	Mrps27	100	77.349	ENSCSAG00000015626	MRPS27	100	77.349	Chlorocebus_sabaeus
ENSMUSG00000041632	Mrps27	88	79.396	ENSCHOG00000002565	MRPS27	100	79.396	Choloepus_hoffmanni
ENSMUSG00000041632	Mrps27	98	67.237	ENSCPBG00000000195	MRPS27	98	67.237	Chrysemys_picta_bellii
ENSMUSG00000041632	Mrps27	81	30.279	ENSCSAVG00000004679	-	78	35.714	Ciona_savignyi
ENSMUSG00000041632	Mrps27	100	78.313	ENSCANG00000034545	MRPS27	100	78.313	Colobus_angolensis_palliatus
ENSMUSG00000041632	Mrps27	100	88.193	ENSCGRG00001016241	Mrps27	100	88.193	Cricetulus_griseus_chok1gshd
ENSMUSG00000041632	Mrps27	100	88.193	ENSCGRG00000005290	Mrps27	100	88.193	Cricetulus_griseus_crigri
ENSMUSG00000041632	Mrps27	100	51.211	ENSCSEG00000017845	mrps27	99	50.721	Cynoglossus_semilaevis
ENSMUSG00000041632	Mrps27	100	56.055	ENSCVAG00000020594	mrps27	99	53.846	Cyprinodon_variegatus
ENSMUSG00000041632	Mrps27	98	49.268	ENSDARG00000059234	mrps27	99	50.000	Danio_rerio
ENSMUSG00000041632	Mrps27	87	76.602	ENSDNOG00000008698	MRPS27	100	76.602	Dasypus_novemcinctus
ENSMUSG00000041632	Mrps27	100	79.808	ENSDORG00000028069	Mrps27	100	79.808	Dipodomys_ordii
ENSMUSG00000041632	Mrps27	90	69.600	ENSETEG00000016540	MRPS27	100	69.487	Echinops_telfairi
ENSMUSG00000041632	Mrps27	97	45.000	ENSEBUG00000008346	mrps27	93	43.627	Eptatretus_burgeri
ENSMUSG00000041632	Mrps27	99	76.214	ENSEASG00005018033	MRPS27	89	76.214	Equus_asinus_asinus
ENSMUSG00000041632	Mrps27	99	76.456	ENSECAG00000008099	MRPS27	89	76.456	Equus_caballus
ENSMUSG00000041632	Mrps27	100	69.398	ENSEEUG00000014006	MRPS27	100	69.398	Erinaceus_europaeus
ENSMUSG00000041632	Mrps27	92	57.358	ENSELUG00000002400	mrps27	93	55.499	Esox_lucius
ENSMUSG00000041632	Mrps27	100	79.036	ENSFCAG00000005452	MRPS27	100	79.036	Felis_catus
ENSMUSG00000041632	Mrps27	95	64.428	ENSFALG00000010306	MRPS27	100	64.428	Ficedula_albicollis
ENSMUSG00000041632	Mrps27	98	79.310	ENSFDAG00000011101	MRPS27	98	78.744	Fukomys_damarensis
ENSMUSG00000041632	Mrps27	52	84.211	ENSFHEG00000019064	mrps27	84	84.211	Fundulus_heteroclitus
ENSMUSG00000041632	Mrps27	98	47.188	ENSGMOG00000007531	mrps27	99	47.002	Gadus_morhua
ENSMUSG00000041632	Mrps27	100	65.394	ENSGALG00000015002	MRPS27	100	65.394	Gallus_gallus
ENSMUSG00000041632	Mrps27	100	54.325	ENSGAFG00000010539	mrps27	84	55.952	Gambusia_affinis
ENSMUSG00000041632	Mrps27	92	58.427	ENSGACG00000006548	mrps27	94	54.707	Gasterosteus_aculeatus
ENSMUSG00000041632	Mrps27	75	68.690	ENSGAGG00000015958	MRPS27	85	68.690	Gopherus_agassizii
ENSMUSG00000041632	Mrps27	98	76.790	ENSGGOG00000010683	MRPS27	100	76.145	Gorilla_gorilla
ENSMUSG00000041632	Mrps27	100	54.671	ENSHBUG00000003318	mrps27	98	53.976	Haplochromis_burtoni
ENSMUSG00000041632	Mrps27	87	80.501	ENSHGLG00000001577	MRPS27	100	80.501	Heterocephalus_glaber_female
ENSMUSG00000041632	Mrps27	95	80.759	ENSHGLG00100006845	MRPS27	100	80.501	Heterocephalus_glaber_male
ENSMUSG00000041632	Mrps27	60	44.048	ENSHCOG00000000714	mrps27	98	45.161	Hippocampus_comes
ENSMUSG00000041632	Mrps27	94	56.010	ENSIPUG00000025051	mrps27	94	57.033	Ictalurus_punctatus
ENSMUSG00000041632	Mrps27	100	78.795	ENSSTOG00000006565	MRPS27	99	78.795	Ictidomys_tridecemlineatus
ENSMUSG00000041632	Mrps27	77	69.955	ENSJJAG00000015087	-	91	85.714	Jaculus_jaculus
ENSMUSG00000041632	Mrps27	100	55.363	ENSKMAG00000000487	mrps27	99	54.676	Kryptolebias_marmoratus
ENSMUSG00000041632	Mrps27	100	53.633	ENSLBEG00000018377	mrps27	93	53.735	Labrus_bergylta
ENSMUSG00000041632	Mrps27	100	62.590	ENSLACG00000014327	MRPS27	99	62.590	Latimeria_chalumnae
ENSMUSG00000041632	Mrps27	100	56.220	ENSLOCG00000011134	mrps27	100	56.220	Lepisosteus_oculatus
ENSMUSG00000041632	Mrps27	79	75.610	ENSLAFG00000004110	MRPS27	100	75.610	Loxodonta_africana
ENSMUSG00000041632	Mrps27	100	77.108	ENSMFAG00000030039	MRPS27	100	77.108	Macaca_fascicularis
ENSMUSG00000041632	Mrps27	100	77.590	ENSMMUG00000017905	MRPS27	100	75.410	Macaca_mulatta
ENSMUSG00000041632	Mrps27	100	77.590	ENSMNEG00000038426	MRPS27	100	77.590	Macaca_nemestrina
ENSMUSG00000041632	Mrps27	100	77.831	ENSMLEG00000028172	MRPS27	100	77.831	Mandrillus_leucophaeus
ENSMUSG00000041632	Mrps27	98	55.903	ENSMAMG00000019547	mrps27	93	55.181	Mastacembelus_armatus
ENSMUSG00000041632	Mrps27	100	54.671	ENSMZEG00005008090	mrps27	98	53.976	Maylandia_zebra
ENSMUSG00000041632	Mrps27	62	61.479	ENSMGAG00000004213	MRPS27	100	61.479	Meleagris_gallopavo
ENSMUSG00000041632	Mrps27	90	82.051	ENSMAUG00000005620	Mrps27	100	82.051	Mesocricetus_auratus
ENSMUSG00000041632	Mrps27	100	76.683	ENSMICG00000004527	MRPS27	98	80.328	Microcebus_murinus
ENSMUSG00000041632	Mrps27	100	87.260	ENSMOCG00000014839	Mrps27	100	87.260	Microtus_ochrogaster
ENSMUSG00000041632	Mrps27	92	57.736	ENSMMOG00000013203	mrps27	99	52.430	Mola_mola
ENSMUSG00000041632	Mrps27	100	69.204	ENSMODG00000001687	MRPS27	99	69.031	Monodelphis_domestica
ENSMUSG00000041632	Mrps27	94	56.522	ENSMALG00000017925	mrps27	65	56.923	Monopterus_albus
ENSMUSG00000041632	Mrps27	100	96.867	MGP_CAROLIEiJ_G0018830	Mrps27	100	96.867	Mus_caroli
ENSMUSG00000041632	Mrps27	99	94.647	MGP_PahariEiJ_G0015905	Mrps27	100	94.647	Mus_pahari
ENSMUSG00000041632	Mrps27	100	96.867	MGP_SPRETEiJ_G0019712	Mrps27	100	96.867	Mus_spretus
ENSMUSG00000041632	Mrps27	100	77.590	ENSMPUG00000014403	MRPS27	100	77.590	Mustela_putorius_furo
ENSMUSG00000041632	Mrps27	76	78.797	ENSMLUG00000007355	MRPS27	100	77.914	Myotis_lucifugus
ENSMUSG00000041632	Mrps27	98	83.784	ENSNGAG00000002484	Mrps27	99	83.092	Nannospalax_galili
ENSMUSG00000041632	Mrps27	53	81.579	ENSNBRG00000011162	-	92	63.536	Neolamprologus_brichardi
ENSMUSG00000041632	Mrps27	50	47.368	ENSNBRG00000015013	mrps27	62	78.182	Neolamprologus_brichardi
ENSMUSG00000041632	Mrps27	76	67.273	ENSNLEG00000032219	-	91	82.682	Nomascus_leucogenys
ENSMUSG00000041632	Mrps27	100	62.291	ENSMEUG00000013990	MRPS27	100	62.291	Notamacropus_eugenii
ENSMUSG00000041632	Mrps27	99	71.117	ENSOPRG00000007274	MRPS27	99	71.117	Ochotona_princeps
ENSMUSG00000041632	Mrps27	84	78.223	ENSODEG00000016210	MRPS27	100	77.716	Octodon_degus
ENSMUSG00000041632	Mrps27	100	54.671	ENSONIG00000015240	mrps27	98	53.682	Oreochromis_niloticus
ENSMUSG00000041632	Mrps27	91	63.395	ENSOANG00000004072	MRPS27	99	62.595	Ornithorhynchus_anatinus
ENSMUSG00000041632	Mrps27	100	77.349	ENSOCUG00000007961	MRPS27	100	77.349	Oryctolagus_cuniculus
ENSMUSG00000041632	Mrps27	75	57.604	ENSORLG00000003800	mrps27	93	71.023	Oryzias_latipes
ENSMUSG00000041632	Mrps27	100	55.862	ENSORLG00020002869	mrps27	98	53.717	Oryzias_latipes_hni
ENSMUSG00000041632	Mrps27	100	55.517	ENSORLG00015011723	mrps27	98	53.717	Oryzias_latipes_hsok
ENSMUSG00000041632	Mrps27	100	55.862	ENSOMEG00000020582	mrps27	98	53.477	Oryzias_melastigma
ENSMUSG00000041632	Mrps27	86	73.538	ENSOGAG00000008385	MRPS27	99	73.538	Otolemur_garnettii
ENSMUSG00000041632	Mrps27	100	78.072	ENSOARG00000005129	MRPS27	100	78.072	Ovis_aries
ENSMUSG00000041632	Mrps27	98	77.531	ENSPPAG00000038112	MRPS27	87	76.867	Pan_paniscus
ENSMUSG00000041632	Mrps27	100	79.036	ENSPPRG00000014416	MRPS27	100	79.036	Panthera_pardus
ENSMUSG00000041632	Mrps27	100	78.554	ENSPTIG00000020435	MRPS27	100	78.554	Panthera_tigris_altaica
ENSMUSG00000041632	Mrps27	98	77.531	ENSPTRG00000016967	MRPS27	100	77.716	Pan_troglodytes
ENSMUSG00000041632	Mrps27	94	79.487	ENSPANG00000015368	MRPS27	94	79.487	Papio_anubis
ENSMUSG00000041632	Mrps27	99	52.530	ENSPKIG00000018916	mrps27	92	52.530	Paramormyrops_kingsleyae
ENSMUSG00000041632	Mrps27	98	66.830	ENSPSIG00000014565	MRPS27	98	66.830	Pelodiscus_sinensis
ENSMUSG00000041632	Mrps27	87	54.800	ENSPMGG00000017275	mrps27	99	53.911	Periophthalmus_magnuspinnatus
ENSMUSG00000041632	Mrps27	100	86.298	ENSPEMG00000023724	Mrps27	100	86.298	Peromyscus_maniculatus_bairdii
ENSMUSG00000041632	Mrps27	98	45.724	ENSPMAG00000009772	mrps27	96	49.235	Petromyzon_marinus
ENSMUSG00000041632	Mrps27	100	67.849	ENSPCIG00000029050	MRPS27	99	67.849	Phascolarctos_cinereus
ENSMUSG00000041632	Mrps27	82	58.228	ENSPFOG00000007317	mrps27	99	54.270	Poecilia_formosa
ENSMUSG00000041632	Mrps27	100	54.325	ENSPLAG00000016221	mrps27	92	52.048	Poecilia_latipinna
ENSMUSG00000041632	Mrps27	75	58.065	ENSPLAG00000004766	MRPS27	90	71.591	Poecilia_latipinna
ENSMUSG00000041632	Mrps27	100	54.325	ENSPMEG00000016504	mrps27	98	52.048	Poecilia_mexicana
ENSMUSG00000041632	Mrps27	75	57.407	ENSPREG00000015143	mrps27	90	70.857	Poecilia_reticulata
ENSMUSG00000041632	Mrps27	98	75.309	ENSPPYG00000015542	MRPS27	100	74.699	Pongo_abelii
ENSMUSG00000041632	Mrps27	100	66.506	ENSPCAG00000006737	MRPS27	100	66.506	Procavia_capensis
ENSMUSG00000041632	Mrps27	100	76.627	ENSPCOG00000028430	MRPS27	100	76.627	Propithecus_coquereli
ENSMUSG00000041632	Mrps27	100	71.807	ENSPVAG00000010933	MRPS27	100	71.807	Pteropus_vampyrus
ENSMUSG00000041632	Mrps27	95	55.725	ENSPNYG00000016318	mrps27	95	55.980	Pundamilia_nyererei
ENSMUSG00000041632	Mrps27	92	58.333	ENSPNAG00000008002	mrps27	94	57.868	Pygocentrus_nattereri
ENSMUSG00000041632	Mrps27	100	91.084	ENSRNOG00000017272	Mrps27	100	91.084	Rattus_norvegicus
ENSMUSG00000041632	Mrps27	100	77.831	ENSRBIG00000013185	MRPS27	100	77.831	Rhinopithecus_bieti
ENSMUSG00000041632	Mrps27	100	77.831	ENSRROG00000040560	MRPS27	100	77.831	Rhinopithecus_roxellana
ENSMUSG00000041632	Mrps27	100	77.108	ENSSBOG00000030386	MRPS27	100	77.108	Saimiri_boliviensis_boliviensis
ENSMUSG00000041632	Mrps27	68	62.437	ENSSHAG00000011388	-	90	65.918	Sarcophilus_harrisii
ENSMUSG00000041632	Mrps27	100	54.483	ENSSFOG00015023271	mrps27	98	55.048	Scleropages_formosus
ENSMUSG00000041632	Mrps27	100	54.325	ENSSMAG00000003423	mrps27	99	52.530	Scophthalmus_maximus
ENSMUSG00000041632	Mrps27	100	54.671	ENSSDUG00000001883	mrps27	99	55.263	Seriola_dumerili
ENSMUSG00000041632	Mrps27	75	57.604	ENSSLDG00000019470	mrps27	90	71.023	Seriola_lalandi_dorsalis
ENSMUSG00000041632	Mrps27	100	56.490	ENSSARG00000004944	MRPS27	100	56.490	Sorex_araneus
ENSMUSG00000041632	Mrps27	87	63.661	ENSSPUG00000000182	MRPS27	97	63.661	Sphenodon_punctatus
ENSMUSG00000041632	Mrps27	100	52.941	ENSSPAG00000009682	mrps27	97	53.081	Stegastes_partitus
ENSMUSG00000041632	Mrps27	89	54.891	ENSSSCG00000011161	-	91	59.412	Sus_scrofa
ENSMUSG00000041632	Mrps27	94	80.256	ENSSSCG00000023818	-	99	80.256	Sus_scrofa
ENSMUSG00000041632	Mrps27	94	64.631	ENSTGUG00000005691	MRPS27	99	64.631	Taeniopygia_guttata
ENSMUSG00000041632	Mrps27	100	56.055	ENSTRUG00000015643	mrps27	97	54.455	Takifugu_rubripes
ENSMUSG00000041632	Mrps27	100	55.363	ENSTNIG00000016683	mrps27	97	54.455	Tetraodon_nigroviridis
ENSMUSG00000041632	Mrps27	100	62.410	ENSTBEG00000016472	MRPS27	100	62.410	Tupaia_belangeri
ENSMUSG00000041632	Mrps27	97	78.164	ENSTTRG00000011837	MRPS27	100	77.163	Tursiops_truncatus
ENSMUSG00000041632	Mrps27	100	78.072	ENSUAMG00000007585	MRPS27	100	79.387	Ursus_americanus
ENSMUSG00000041632	Mrps27	100	77.590	ENSUMAG00000007672	MRPS27	100	77.590	Ursus_maritimus
ENSMUSG00000041632	Mrps27	100	70.120	ENSVPAG00000009593	MRPS27	100	70.120	Vicugna_pacos
ENSMUSG00000041632	Mrps27	95	78.880	ENSVVUG00000007276	MRPS27	89	78.880	Vulpes_vulpes
ENSMUSG00000041632	Mrps27	94	57.531	ENSXETG00000034180	MRPS27	100	57.531	Xenopus_tropicalis
ENSMUSG00000041632	Mrps27	75	58.525	ENSXCOG00000007727	mrps27	86	72.159	Xiphophorus_couchianus
ENSMUSG00000041632	Mrps27	100	54.325	ENSXMAG00000016098	mrps27	98	53.125	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	-	ISO	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005737	cytoplasm	-	ISO	Component
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005763	mitochondrial small ribosomal subunit	-	ISO	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006417	regulation of translation	-	IEA	Process
GO:0008283	cell proliferation	-	ISO	Process
GO:0019843	rRNA binding	-	ISO	Function
GO:0070131	positive regulation of mitochondrial translation	-	ISO	Process
GO:0097177	mitochondrial ribosome binding	-	ISO	Function